Configuration

Kraken2 v2.17.1, headline setting (Tisza et al. 2026)

Kraken2 v2.17.1 at the authors' headline parameter setting, querying the EsViritu Virus Pathogen Database.

Overview

An explanatory profile has not yet been reviewed for this record.

Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.

Evaluations and results

3 evaluations · 21 results. Different protocols are not a single leaderboard.

Sorted by Bray curtis dissimilarity (RPM-based abundance profile; mean over mock communities; ANI-capped truth) (lower is better). The best value in each column is highlighted. Decimals are rounded for display; each value links to the printed value and its source.

Tested configuration	Protocol and dataset	Bray curtis dissimilarity (RPM-based abundance profile; mean over mock communities; ANI-capped truth)	Bray curtis dissimilarity (RPM-based abundance profile; mean over six mock communities; rank family, strict truth)	Bray curtis dissimilarity (RPM-based abundance profile; mean over six mock communities; rank genus, strict truth)	Bray curtis dissimilarity (RPM-based abundance profile; mean over six mock communities; rank species, strict truth)	Bray curtis dissimilarity (RPM-based abundance profile; mean over six mock communities; rank subspecies, strict truth)	F1 (taxon detection; mean over mock communities; ANI-capped truth)	F1 (taxon detection; mean over six mock communities; rank family, strict truth)	F1 (taxon detection; mean over six mock communities; rank genus, strict truth)	F1 (taxon detection; mean over six mock communities; rank species, strict truth)	F1 (taxon detection; mean over six mock communities; rank subspecies, strict truth)	False positive rate (percentage of individual reads falsely assigned; mean over seven negative-control libraries)	False positive rate (percentage of individual reads falsely assigned; median over seven negative-control libraries)	False positives (false species reported; maximum over seven negative-control libraries)	False positives (false species reported; median over seven negative-control libraries)	Pearson (abundance profile against truth; mean over mock communities; ANI-capped truth)	Pearson (abundance profile against truth; mean over six mock communities; rank family, strict truth)	Pearson (abundance profile against truth; mean over six mock communities; rank genus, strict truth)	Pearson (abundance profile against truth; mean over six mock communities; rank species, strict truth)	Pearson (abundance profile against truth; mean over six mock communities; rank subspecies, strict truth)	Recall (model-estimated family-level detection probability at 10 read pairs; marginal mean over seven positive-control genomes)	Recall (model-estimated family-level detection probability at 100 read pairs; marginal mean over seven positive-control genomes)
Kraken2 v2.17.1, headline setting (Tisza et al. 2026)Evaluation	Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9), Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.59	0.572	0.557	0.598	0.594	0.54	0.754	0.682	0.632	0.612	Not reported	Not reported	Not reported	Not reported	0.353	0.384	0.406	0.365	0.37	Not reported	Not reported
Kraken2 v2.17.1, headline setting (Tisza et al. 2026)Evaluation	False positives in seven pathogen-free libraries (Tisza et al. 2026 Table S6), Seven pathogen-free negative-control read libraries (Tisza et al. 2026)	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	0.000186%	0.0000498%	24	6	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported
Kraken2 v2.17.1, headline setting (Tisza et al. 2026)Evaluation	Positive-control virus detection by read depth (Tisza et al. 2026 Table S2), Positive-control synthetic reads from seven divergent virus genomes (Tisza et al. 2026)	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	Not reported	0.0451	0.589

All 21 result rows with coverage, uncertainty and sources

Filter evaluations

Tested model or methodProtocolDatasetEvaluation setupMetricEvidence origin

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configuration	Protocol and dataset	Finding	Evidence and details
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) Dataset: Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.59 Bray curtis dissimilarity (RPM-based abundance profile; mean over mock communities; ANI-capped truth) unitless · lower Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) rna-pathogen-20261011-tisza2026-protocol-mock Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S9, row 26 (base_tool 'Kraken2', rank 'ani_capped', truth_mode 'capped'), column 'bray_curtis' (cell E26)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) Dataset: Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.54 F1 (taxon detection; mean over mock communities; ANI-capped truth) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) rna-pathogen-20261011-tisza2026-protocol-mock Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S9, row 26 (base_tool 'Kraken2', rank 'ani_capped', truth_mode 'capped'), column 'F1' (cell D26)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) Dataset: Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.353 Pearson (abundance profile against truth; mean over mock communities; ANI-capped truth) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) rna-pathogen-20261011-tisza2026-protocol-mock Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S9, row 26 (base_tool 'Kraken2', rank 'ani_capped', truth_mode 'capped'), column 'pearson' (cell F26)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) Dataset: Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.572 Bray curtis dissimilarity (RPM-based abundance profile; mean over six mock communities; rank family, strict truth) unitless · lower Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) rna-pathogen-20261011-tisza2026-protocol-mock Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S9, row 6 (base_tool 'Kraken2', rank 'family', truth_mode 'strict'), column 'bray_curtis' (cell E6)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) Dataset: Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.754 F1 (taxon detection; mean over six mock communities; rank family, strict truth) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) rna-pathogen-20261011-tisza2026-protocol-mock Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S9, row 6 (base_tool 'Kraken2', rank 'family', truth_mode 'strict'), column 'F1' (cell D6)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) Dataset: Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.384 Pearson (abundance profile against truth; mean over six mock communities; rank family, strict truth) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) rna-pathogen-20261011-tisza2026-protocol-mock Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S9, row 6 (base_tool 'Kraken2', rank 'family', truth_mode 'strict'), column 'pearson' (cell F6)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) Dataset: Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.557 Bray curtis dissimilarity (RPM-based abundance profile; mean over six mock communities; rank genus, strict truth) unitless · lower Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) rna-pathogen-20261011-tisza2026-protocol-mock Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S9, row 11 (base_tool 'Kraken2', rank 'genus', truth_mode 'strict'), column 'bray_curtis' (cell E11)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) Dataset: Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.682 F1 (taxon detection; mean over six mock communities; rank genus, strict truth) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) rna-pathogen-20261011-tisza2026-protocol-mock Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S9, row 11 (base_tool 'Kraken2', rank 'genus', truth_mode 'strict'), column 'F1' (cell D11)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) Dataset: Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.406 Pearson (abundance profile against truth; mean over six mock communities; rank genus, strict truth) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) rna-pathogen-20261011-tisza2026-protocol-mock Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S9, row 11 (base_tool 'Kraken2', rank 'genus', truth_mode 'strict'), column 'pearson' (cell F11)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) Dataset: Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.598 Bray curtis dissimilarity (RPM-based abundance profile; mean over six mock communities; rank species, strict truth) unitless · lower Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) rna-pathogen-20261011-tisza2026-protocol-mock Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S9, row 16 (base_tool 'Kraken2', rank 'species', truth_mode 'strict'), column 'bray_curtis' (cell E16)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) Dataset: Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.632 F1 (taxon detection; mean over six mock communities; rank species, strict truth) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) rna-pathogen-20261011-tisza2026-protocol-mock Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S9, row 16 (base_tool 'Kraken2', rank 'species', truth_mode 'strict'), column 'F1' (cell D16)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) Dataset: Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.365 Pearson (abundance profile against truth; mean over six mock communities; rank species, strict truth) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) rna-pathogen-20261011-tisza2026-protocol-mock Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S9, row 16 (base_tool 'Kraken2', rank 'species', truth_mode 'strict'), column 'pearson' (cell F16)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) Dataset: Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.594 Bray curtis dissimilarity (RPM-based abundance profile; mean over six mock communities; rank subspecies, strict truth) unitless · lower Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) rna-pathogen-20261011-tisza2026-protocol-mock Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S9, row 21 (base_tool 'Kraken2', rank 'subspecies', truth_mode 'strict'), column 'bray_curtis' (cell E21)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) Dataset: Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.612 F1 (taxon detection; mean over six mock communities; rank subspecies, strict truth) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) rna-pathogen-20261011-tisza2026-protocol-mock Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S9, row 21 (base_tool 'Kraken2', rank 'subspecies', truth_mode 'strict'), column 'F1' (cell D21)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) Dataset: Six mutated virus mock communities with bacterial and human background (Tisza et al. 2026)	0.37 Pearson (abundance profile against truth; mean over six mock communities; rank subspecies, strict truth) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Mutated virus mock-community profiling against ground truth (Tisza et al. 2026 Table S9) rna-pathogen-20261011-tisza2026-protocol-mock Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S9, row 21 (base_tool 'Kraken2', rank 'subspecies', truth_mode 'strict'), column 'pearson' (cell F21)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: False positives in seven pathogen-free libraries (Tisza et al. 2026 Table S6) Dataset: Seven pathogen-free negative-control read libraries (Tisza et al. 2026)	24 False positives (false species reported; maximum over seven negative-control libraries) count · lower Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on False positives in seven pathogen-free libraries (Tisza et al. 2026 Table S6) rna-pathogen-20261011-tisza2026-protocol-neg Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S6, row 6 (base_tool 'Kraken2'), column 'max_n_species' (cell F6)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: False positives in seven pathogen-free libraries (Tisza et al. 2026 Table S6) Dataset: Seven pathogen-free negative-control read libraries (Tisza et al. 2026)	0.000186% False positive rate (percentage of individual reads falsely assigned; mean over seven negative-control libraries) percent · lower Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on False positives in seven pathogen-free libraries (Tisza et al. 2026 Table S6) rna-pathogen-20261011-tisza2026-protocol-neg Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S6, row 6 (base_tool 'Kraken2'), column 'mean_fp_pct' (cell D6)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: False positives in seven pathogen-free libraries (Tisza et al. 2026 Table S6) Dataset: Seven pathogen-free negative-control read libraries (Tisza et al. 2026)	0.0000498% False positive rate (percentage of individual reads falsely assigned; median over seven negative-control libraries) percent · lower Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on False positives in seven pathogen-free libraries (Tisza et al. 2026 Table S6) rna-pathogen-20261011-tisza2026-protocol-neg Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S6, row 6 (base_tool 'Kraken2'), column 'median_fp_pct' (cell C6)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: False positives in seven pathogen-free libraries (Tisza et al. 2026 Table S6) Dataset: Seven pathogen-free negative-control read libraries (Tisza et al. 2026)	6 False positives (false species reported; median over seven negative-control libraries) count · lower Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on False positives in seven pathogen-free libraries (Tisza et al. 2026 Table S6) rna-pathogen-20261011-tisza2026-protocol-neg Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S6, row 6 (base_tool 'Kraken2'), column 'median_n_species' (cell E6)
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Positive-control virus detection by read depth (Tisza et al. 2026 Table S2) Dataset: Positive-control synthetic reads from seven divergent virus genomes (Tisza et al. 2026)	0.0451 Recall (model-estimated family-level detection probability at 10 read pairs; marginal mean over seven positive-control genomes) fraction · higher Uncertainty: 95% CI 0.02256255452587475 to 0.08820897881741546. Asymptotic interval from brglm2 estimated marginal means; standard error printed 0.01575080088172684 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Positive-control virus detection by read depth (Tisza et al. 2026 Table S2) rna-pathogen-20261011-tisza2026-protocol-pos Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S2, row 6 (base_tool 'Kraken2', read_pairs 10), column 'prob' (cell C6); interval columns 'asymp.LCL' and 'asymp.UCL'
Configuration: Kraken2 v2.17.1, headline setting (Tisza et al. 2026)	Protocol: Positive-control virus detection by read depth (Tisza et al. 2026 Table S2) Dataset: Positive-control synthetic reads from seven divergent virus genomes (Tisza et al. 2026)	0.589 Recall (model-estimated family-level detection probability at 100 read pairs; marginal mean over seven positive-control genomes) fraction · higher Uncertainty: 95% CI 0.4695359295150824 to 0.6991817422401287. Asymptotic interval from brglm2 estimated marginal means; standard error printed 0.0596107597598103 Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source Kraken2 v2.17.1 on Positive-control virus detection by read depth (Tisza et al. 2026 Table S2) rna-pathogen-20261011-tisza2026-protocol-pos Aggregation: Not reported Tisza et al. 2026 Supplemental Tables S1-S25 (bioRxiv media-1.xlsx) · Supplemental Table S2, row 11 (base_tool 'Kraken2', read_pairs 100), column 'prob' (cell C11); interval columns 'asymp.LCL' and 'asymp.UCL'

Source checking is not independent reproduction. Release 2026-10-22-1b7cf027e4f6.

Use this configuration

How it works, versions and access

Strengths, limitations and unresolved questions

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

0 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-22-1b7cf027e4f6
Property and statement	Original source and location	Review and provenance

No evidence rows match these filters. Choose another scope or clear the search.

How to read the evidence

Sources and history

Release 2026-10-22-1b7cf027e4f6 · Record review: source checked

1 source record and release history

EsViritu is a sensitive and specific profiler for viral pathogen detection and genome recovery in metagenomes · Original source · bioRxiv 10.64898/2026.09.29.755457 v1, posted 2026-09-30; JATS XML

Download this release (gzip)

Technical metadata and extraction receipts

Stable ID: rna-pathogen-20261011-tisza2026-config-kraken2

areas: microbes-communities
contexts: research
method types: conventional_pipeline
reported name: Kraken2 v2.17.1
version: 2.17.1
foundation model eligible: false
parameters: confidence 0.5, minimum-hit-group 2; database: EsViritu Virus Pathogen Database v3.2.4b (v3.2.4 with taxonomy labels taken only from the NCBI TaxDump of 2026-06-01), built into each tool's own index format
source locator: Methods 'Tools and parameters'; Results 'EsViritu reaches read-level sensitivity while avoiding false positives' paragraph 3 (Headline setting 'Kraken2=confidence score:0.5, minimum-hit-group:2')
access reuse: Third-party tool run by the EsViritu authors; access not described in the source
model identity note: Printed as 'v2.17.1' followed by reference marker 19

Related records

Suggest a correction