What this source contributed
Records in this release that cite this source. A record can cite several sources.
Results
Values as the source printed them. Compare results only under compatible protocols, datasets and metrics.
Claims
Statements this source supports, each with where in the source it was checked.
- Open Problems label projection CENGEN-BATCH-ACCURACY: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(cengen_batch), metric(accuracy))
- Open Problems label projection CENGEN-BATCH-F1-MACRO: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(cengen_batch), metric(f1_macro))
- Open Problems label projection CENGEN-BATCH-F1: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(cengen_batch), metric(f1))
- Open Problems label projection CENGEN-RANDOM-ACCURACY: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(cengen_random), metric(accuracy))
- Open Problems label projection CENGEN-RANDOM-F1-MACRO: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(cengen_random), metric(f1_macro))
- Open Problems label projection CENGEN-RANDOM-F1: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(cengen_random), metric(f1))
- Open Problems label projection PANCREAS-BATCH-ACCURACY: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(pancreas_batch), metric(accuracy))
- Open Problems label projection PANCREAS-BATCH-F1-MACRO: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(pancreas_batch), metric(f1_macro))
- Open Problems label projection PANCREAS-BATCH-F1: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(pancreas_batch), metric(f1))
- Open Problems label projection PANCREAS-RANDOM-ACCURACY: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(pancreas_random), metric(accuracy))
- Open Problems label projection PANCREAS-RANDOM-F1-MACRO: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(pancreas_random), metric(f1_macro))
- Open Problems label projection PANCREAS-RANDOM-F1: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(pancreas_random), metric(f1))
- Open Problems label projection PANCREAS-RANDOM-LABEL-NOISE-ACCURACY: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(pancreas_random_label_noise), metric(accuracy))
- Open Problems label projection PANCREAS-RANDOM-LABEL-NOISE-F1-MACRO: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(pancreas_random_label_noise), metric(f1_macro))
- Open Problems label projection PANCREAS-RANDOM-LABEL-NOISE-F1: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(pancreas_random_label_noise), metric(f1))
- Open Problems label projection TABULA-MURIS-SENIS-LUNG-RANDOM-ACCURACY: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(tabula_muris_senis_lung_random), metric(accuracy))
- Open Problems label projection TABULA-MURIS-SENIS-LUNG-RANDOM-F1-MACRO: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(tabula_muris_senis_lung_random), metric(f1_macro))
- Open Problems label projection TABULA-MURIS-SENIS-LUNG-RANDOM-F1: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(tabula_muris_senis_lung_random), metric(f1))
- Open Problems label projection ZEBRAFISH-LABS-ACCURACY: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(zebrafish_labs), metric(accuracy))
- Open Problems label projection ZEBRAFISH-LABS-F1-MACRO: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(zebrafish_labs), metric(f1_macro))
- Open Problems label projection ZEBRAFISH-LABS-F1: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(zebrafish_labs), metric(f1))
- Open Problems label projection ZEBRAFISH-RANDOM-ACCURACY: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(zebrafish_random), metric(accuracy))
- Open Problems label projection ZEBRAFISH-RANDOM-F1-MACRO: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(zebrafish_random), metric(f1_macro))
- Open Problems label projection ZEBRAFISH-RANDOM-F1: part of discovery-benchmark-open-problems: Part of Open Problems (results, dataset(zebrafish_random), metric(f1))
Models, benchmarks and other records
Methods (2)
Configurations (14)
- K-neighbors classifier (log CP10k)
- K-neighbors classifier (log scran)
- Logistic regression (log CP10k)
- Logistic regression (log scran)
- Majority Vote
- Multilayer perceptron (log CP10k)
- Multilayer perceptron (log scran)
- scANVI (All genes)
- scANVI (Seurat v3 2000 HVG)
- scArches+scANVI (All genes)
- scArches+scANVI (Seurat v3 2000 HVG)
- Seurat reference mapping (SCTransform)
- XGBoost (log CP10k)
- XGBoost (log scran)
Benchmarks (1)
Tasks (25)
- Donor-held-out reference mapping
- Open Problems label projection CENGEN-BATCH-ACCURACY: Label projection on CeNGEN (split by batch), Accuracy
- Open Problems label projection CENGEN-BATCH-F1-MACRO: Label projection on CeNGEN (split by batch), Macro F1 score
- Open Problems label projection CENGEN-BATCH-F1: Label projection on CeNGEN (split by batch), F1 score
- Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- Open Problems label projection CENGEN-RANDOM-F1-MACRO: Label projection on CeNGEN (random split), Macro F1 score
- Open Problems label projection CENGEN-RANDOM-F1: Label projection on CeNGEN (random split), F1 score
- Open Problems label projection PANCREAS-BATCH-ACCURACY: Label projection on Pancreas (by batch), Accuracy
- Open Problems label projection PANCREAS-BATCH-F1-MACRO: Label projection on Pancreas (by batch), Macro F1 score
- Open Problems label projection PANCREAS-BATCH-F1: Label projection on Pancreas (by batch), F1 score
- Open Problems label projection PANCREAS-RANDOM-ACCURACY: Label projection on Pancreas (random split), Accuracy
- Open Problems label projection PANCREAS-RANDOM-F1-MACRO: Label projection on Pancreas (random split), Macro F1 score
- Open Problems label projection PANCREAS-RANDOM-F1: Label projection on Pancreas (random split), F1 score
- Open Problems label projection PANCREAS-RANDOM-LABEL-NOISE-ACCURACY: Label projection on Pancreas (random split with label noise), Accuracy
- Open Problems label projection PANCREAS-RANDOM-LABEL-NOISE-F1-MACRO: Label projection on Pancreas (random split with label noise), Macro F1 score
- Open Problems label projection PANCREAS-RANDOM-LABEL-NOISE-F1: Label projection on Pancreas (random split with label noise), F1 score
- Open Problems label projection TABULA-MURIS-SENIS-LUNG-RANDOM-ACCURACY: Label projection on Tabula Muris Senis Lung (random split), Accuracy
- Open Problems label projection TABULA-MURIS-SENIS-LUNG-RANDOM-F1-MACRO: Label projection on Tabula Muris Senis Lung (random split), Macro F1 score
- Open Problems label projection TABULA-MURIS-SENIS-LUNG-RANDOM-F1: Label projection on Tabula Muris Senis Lung (random split), F1 score
- Open Problems label projection ZEBRAFISH-LABS-ACCURACY: Label projection on Zebrafish (by laboratory), Accuracy
- Open Problems label projection ZEBRAFISH-LABS-F1-MACRO: Label projection on Zebrafish (by laboratory), Macro F1 score
- Open Problems label projection ZEBRAFISH-LABS-F1: Label projection on Zebrafish (by laboratory), F1 score
- Open Problems label projection ZEBRAFISH-RANDOM-ACCURACY: Label projection on Zebrafish (random split), Accuracy
- Open Problems label projection ZEBRAFISH-RANDOM-F1-MACRO: Label projection on Zebrafish (random split), Macro F1 score
- Open Problems label projection ZEBRAFISH-RANDOM-F1: Label projection on Zebrafish (random split), F1 score
Dataset subsets (8)
- CeNGEN (random split) (Open Problems label projection split)
- CeNGEN (split by batch) (Open Problems label projection split)
- Pancreas (by batch) (Open Problems label projection split)
- Pancreas (random split with label noise) (Open Problems label projection split)
- Pancreas (random split) (Open Problems label projection split)
- Tabula Muris Senis Lung (random split) (Open Problems label projection split)
- Zebrafish (by laboratory) (Open Problems label projection split)
- Zebrafish (random split) (Open Problems label projection split)
Evaluations (384)
- K-neighbors classifier (log CP10k) on Open Problems label projection CENGEN-BATCH-ACCURACY: Label projection on CeNGEN (split by batch), Accuracy
- K-neighbors classifier (log CP10k) on Open Problems label projection CENGEN-BATCH-F1-MACRO: Label projection on CeNGEN (split by batch), Macro F1 score
- K-neighbors classifier (log CP10k) on Open Problems label projection CENGEN-BATCH-F1: Label projection on CeNGEN (split by batch), F1 score
- K-neighbors classifier (log CP10k) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- K-neighbors classifier (log CP10k) on Open Problems label projection CENGEN-RANDOM-F1-MACRO: Label projection on CeNGEN (random split), Macro F1 score
- K-neighbors classifier (log CP10k) on Open Problems label projection CENGEN-RANDOM-F1: Label projection on CeNGEN (random split), F1 score
- K-neighbors classifier (log CP10k) on Open Problems label projection PANCREAS-BATCH-ACCURACY: Label projection on Pancreas (by batch), Accuracy
- K-neighbors classifier (log CP10k) on Open Problems label projection PANCREAS-BATCH-F1-MACRO: Label projection on Pancreas (by batch), Macro F1 score
- K-neighbors classifier (log CP10k) on Open Problems label projection PANCREAS-BATCH-F1: Label projection on Pancreas (by batch), F1 score
- K-neighbors classifier (log CP10k) on Open Problems label projection PANCREAS-RANDOM-ACCURACY: Label projection on Pancreas (random split), Accuracy
- K-neighbors classifier (log CP10k) on Open Problems label projection PANCREAS-RANDOM-F1-MACRO: Label projection on Pancreas (random split), Macro F1 score
- K-neighbors classifier (log CP10k) on Open Problems label projection PANCREAS-RANDOM-F1: Label projection on Pancreas (random split), F1 score
- K-neighbors classifier (log CP10k) on Open Problems label projection PANCREAS-RANDOM-LABEL-NOISE-ACCURACY: Label projection on Pancreas (random split with label noise), Accuracy
- K-neighbors classifier (log CP10k) on Open Problems label projection PANCREAS-RANDOM-LABEL-NOISE-F1-MACRO: Label projection on Pancreas (random split with label noise), Macro F1 score
- K-neighbors classifier (log CP10k) on Open Problems label projection PANCREAS-RANDOM-LABEL-NOISE-F1: Label projection on Pancreas (random split with label noise), F1 score
- K-neighbors classifier (log CP10k) on Open Problems label projection TABULA-MURIS-SENIS-LUNG-RANDOM-ACCURACY: Label projection on Tabula Muris Senis Lung (random split), Accuracy
- K-neighbors classifier (log CP10k) on Open Problems label projection TABULA-MURIS-SENIS-LUNG-RANDOM-F1-MACRO: Label projection on Tabula Muris Senis Lung (random split), Macro F1 score
- K-neighbors classifier (log CP10k) on Open Problems label projection TABULA-MURIS-SENIS-LUNG-RANDOM-F1: Label projection on Tabula Muris Senis Lung (random split), F1 score
- K-neighbors classifier (log CP10k) on Open Problems label projection ZEBRAFISH-LABS-ACCURACY: Label projection on Zebrafish (by laboratory), Accuracy
- K-neighbors classifier (log CP10k) on Open Problems label projection ZEBRAFISH-LABS-F1-MACRO: Label projection on Zebrafish (by laboratory), Macro F1 score
- K-neighbors classifier (log CP10k) on Open Problems label projection ZEBRAFISH-LABS-F1: Label projection on Zebrafish (by laboratory), F1 score
- K-neighbors classifier (log CP10k) on Open Problems label projection ZEBRAFISH-RANDOM-ACCURACY: Label projection on Zebrafish (random split), Accuracy
- K-neighbors classifier (log CP10k) on Open Problems label projection ZEBRAFISH-RANDOM-F1-MACRO: Label projection on Zebrafish (random split), Macro F1 score
- K-neighbors classifier (log CP10k) on Open Problems label projection ZEBRAFISH-RANDOM-F1: Label projection on Zebrafish (random split), F1 score
- K-neighbors classifier (log scran) on Open Problems label projection CENGEN-BATCH-ACCURACY: Label projection on CeNGEN (split by batch), Accuracy
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
15 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Artifact SHA-256 e223ab712ff55997a3abe659f280d4ea2952700e767b87e02c434701da9833c1 Source metadata | openproblems-label primary benchmark evidence No field-specific location recorded Version: v1.0.0 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Artifact url https://www.openproblems.bio/benchmarks/label_projection/v1.0.0/ Source metadata | openproblems-label primary benchmark evidence No field-specific location recorded Version: v1.0.0 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Hash scope Exact retrieved primary paper artifact bytes. Source metadata | openproblems-label primary benchmark evidence No field-specific location recorded Version: v1.0.0 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Retrieved at 2026-09-16T21:16:30.026457+00:00 Source metadata | openproblems-label primary benchmark evidence No field-specific location recorded Version: v1.0.0 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Review method1 values
| openproblems-label primary benchmark evidence No field-specific location recorded Version: v1.0.0 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Review: scope Source identification and table transcription; no independent experimental reproduction. Source metadata | openproblems-label primary benchmark evidence No field-specific location recorded Version: v1.0.0 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Url https://www.openproblems.bio/benchmarks/label_projection/v1.0.0/ Source metadata | openproblems-label primary benchmark evidence No field-specific location recorded Version: v1.0.0 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Version v1.0.0 Source metadata | openproblems-label primary benchmark evidence No field-specific location recorded Version: v1.0.0 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Description Primary reference; inspect retrieval status and review scope. Source metadata | openproblems-label primary benchmark evidence No field-specific location recorded Version: v1.0.0 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Search facets None recorded Source metadata | openproblems-label primary benchmark evidence No field-specific location recorded Version: v1.0.0 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Sources and history
Release 2026-11-02-a7f03c9e55a5 · Record review: source checked
Primary reference; inspect retrieval status and review scope.
Technical metadata and extraction receipts
Stable ID: expansion-p3-open-problems
- url
- https://www.openproblems.bio/benchmarks/label_projection/v1.0.0/
- version
- v1.0.0
- retrieved at
- 2026-09-16T21:16:30.026457+00:00
- artifact sha256
- e223ab712ff55997a3abe659f280d4ea2952700e767b87e02c434701da9833c1
- artifact url
- https://www.openproblems.bio/benchmarks/label_projection/v1.0.0/
- hash scope
- Exact retrieved primary paper artifact bytes.
- review
- scope: Source identification and table transcription; no independent experimental reproduction.; method: automated-source-review