The split of Zebrafish (by laboratory) that Open Problems label projection evaluated on. The upstream dataset release is not catalogued here, so no claim is made that this matches its original splits.
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48 evaluations · 48 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: K-neighbors classifier (log CP10k) | Task: Open Problems label projection ZEBRAFISH-LABS-ACCURACY: Label projection on Zebrafish (by laboratory), Accuracy Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.13 accuracy fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(k_neighbors_classifier), paramset(log CP10k), metric(accuracy) |
| Configuration: K-neighbors classifier (log CP10k) | Task: Open Problems label projection ZEBRAFISH-LABS-F1: Label projection on Zebrafish (by laboratory), F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.142 f1 fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(k_neighbors_classifier), paramset(log CP10k), metric(f1) |
| Configuration: K-neighbors classifier (log CP10k) | Task: Open Problems label projection ZEBRAFISH-LABS-F1-MACRO: Label projection on Zebrafish (by laboratory), Macro F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.164 f1-macro fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(k_neighbors_classifier), paramset(log CP10k), metric(f1_macro) |
| Configuration: K-neighbors classifier (log scran) | Task: Open Problems label projection ZEBRAFISH-LABS-ACCURACY: Label projection on Zebrafish (by laboratory), Accuracy Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.191 accuracy fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(k_neighbors_classifier), paramset(log scran), metric(accuracy) |
| Configuration: K-neighbors classifier (log scran) | Task: Open Problems label projection ZEBRAFISH-LABS-F1: Label projection on Zebrafish (by laboratory), F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.202 f1 fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(k_neighbors_classifier), paramset(log scran), metric(f1) |
| Configuration: K-neighbors classifier (log scran) | Task: Open Problems label projection ZEBRAFISH-LABS-F1-MACRO: Label projection on Zebrafish (by laboratory), Macro F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.2 f1-macro fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(k_neighbors_classifier), paramset(log scran), metric(f1_macro) |
| Configuration: Logistic regression (log CP10k) | Task: Open Problems label projection ZEBRAFISH-LABS-ACCURACY: Label projection on Zebrafish (by laboratory), Accuracy Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.248 accuracy fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(logistic_regression), paramset(log CP10k), metric(accuracy) |
| Configuration: Logistic regression (log CP10k) | Task: Open Problems label projection ZEBRAFISH-LABS-F1: Label projection on Zebrafish (by laboratory), F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.288 f1 fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(logistic_regression), paramset(log CP10k), metric(f1) |
| Configuration: Logistic regression (log CP10k) | Task: Open Problems label projection ZEBRAFISH-LABS-F1-MACRO: Label projection on Zebrafish (by laboratory), Macro F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.233 f1-macro fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(logistic_regression), paramset(log CP10k), metric(f1_macro) |
| Configuration: Logistic regression (log scran) | Task: Open Problems label projection ZEBRAFISH-LABS-ACCURACY: Label projection on Zebrafish (by laboratory), Accuracy Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.245 accuracy fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(logistic_regression), paramset(log scran), metric(accuracy) |
| Configuration: Logistic regression (log scran) | Task: Open Problems label projection ZEBRAFISH-LABS-F1: Label projection on Zebrafish (by laboratory), F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.29 f1 fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(logistic_regression), paramset(log scran), metric(f1) |
| Configuration: Logistic regression (log scran) | Task: Open Problems label projection ZEBRAFISH-LABS-F1-MACRO: Label projection on Zebrafish (by laboratory), Macro F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.225 f1-macro fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(logistic_regression), paramset(log scran), metric(f1_macro) |
| Configuration: Majority Vote | Task: Open Problems label projection ZEBRAFISH-LABS-ACCURACY: Label projection on Zebrafish (by laboratory), Accuracy Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0 accuracy fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(majority_vote), paramset(none), metric(accuracy) |
| Configuration: Majority Vote | Task: Open Problems label projection ZEBRAFISH-LABS-F1: Label projection on Zebrafish (by laboratory), F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0 f1 fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(majority_vote), paramset(none), metric(f1) |
| Configuration: Majority Vote | Task: Open Problems label projection ZEBRAFISH-LABS-F1-MACRO: Label projection on Zebrafish (by laboratory), Macro F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0 f1-macro fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(majority_vote), paramset(none), metric(f1_macro) |
| Configuration: Multilayer perceptron (log CP10k) | Task: Open Problems label projection ZEBRAFISH-LABS-ACCURACY: Label projection on Zebrafish (by laboratory), Accuracy Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.237 accuracy fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(multilayer_perceptron), paramset(log CP10k), metric(accuracy) |
| Configuration: Multilayer perceptron (log CP10k) | Task: Open Problems label projection ZEBRAFISH-LABS-F1: Label projection on Zebrafish (by laboratory), F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.276 f1 fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(multilayer_perceptron), paramset(log CP10k), metric(f1) |
| Configuration: Multilayer perceptron (log CP10k) | Task: Open Problems label projection ZEBRAFISH-LABS-F1-MACRO: Label projection on Zebrafish (by laboratory), Macro F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.204 f1-macro fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(multilayer_perceptron), paramset(log CP10k), metric(f1_macro) |
| Configuration: Multilayer perceptron (log scran) | Task: Open Problems label projection ZEBRAFISH-LABS-ACCURACY: Label projection on Zebrafish (by laboratory), Accuracy Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.239 accuracy fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(multilayer_perceptron), paramset(log scran), metric(accuracy) |
| Configuration: Multilayer perceptron (log scran) | Task: Open Problems label projection ZEBRAFISH-LABS-F1: Label projection on Zebrafish (by laboratory), F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.307 f1 fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(multilayer_perceptron), paramset(log scran), metric(f1) |
| Configuration: Multilayer perceptron (log scran) | Task: Open Problems label projection ZEBRAFISH-LABS-F1-MACRO: Label projection on Zebrafish (by laboratory), Macro F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.168 f1-macro fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(multilayer_perceptron), paramset(log scran), metric(f1_macro) |
| Method: Random Labels | Task: Open Problems label projection ZEBRAFISH-LABS-ACCURACY: Label projection on Zebrafish (by laboratory), Accuracy Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.0278 accuracy fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(random_labels), paramset(none), metric(accuracy) |
| Method: Random Labels | Task: Open Problems label projection ZEBRAFISH-LABS-F1: Label projection on Zebrafish (by laboratory), F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.0387 f1 fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(random_labels), paramset(none), metric(f1) |
| Method: Random Labels | Task: Open Problems label projection ZEBRAFISH-LABS-F1-MACRO: Label projection on Zebrafish (by laboratory), Macro F1 score Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.0151 f1-macro fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(random_labels), paramset(none), metric(f1_macro) |
| Configuration: scANVI (All genes) | Task: Open Problems label projection ZEBRAFISH-LABS-ACCURACY: Label projection on Zebrafish (by laboratory), Accuracy Dataset subset: Zebrafish (by laboratory) (Open Problems label projection split) | 0.22 accuracy fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source90k cells from zebrafish embryos throughout the first day of development, with and without a knockout of chordin, an important developmental gene. Split into train/test by laboratory. Dimensions: 26022 cells, 25258 genes. 24 cell types (avg. 1084±1156 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(zebrafish_labs), method(scanvi), paramset(All genes), metric(accuracy) |
Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.
This record describes a particular subset or cohort used in an evaluation. Its results do not describe the full dataset.
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One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
2 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| description The split of Zebrafish (by laboratory) that Open Problems label projection evaluated on. The upstream dataset release is not catalogued here, so no claim is made that this matches its original splits. Context-only references | openproblems-label primary benchmark evidence No field-specific location recorded Version: v1.0.0 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| name Zebrafish (by laboratory) (Open Problems label projection split) Context-only references | openproblems-label primary benchmark evidence No field-specific location recorded Version: v1.0.0 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
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Release 2026-09-29-06401fd5b220 · Record review: source checked
Stable ID: open-problems-dataset-zebrafish-by-laboratory