Source-defined subset: Amylase. Exact membership and scoring coverage remain as reported in the cited artifact.
36 evaluations · 71 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: CARP-640M likelihood | Protocol: FLIP2 Amylase far-to-close; held-out test set · Amylase Dataset subset: Amylase | 0.919 NDCG (cutoff not stated) unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCARP-640M likelihood · FLIP2 Amylase far-to-close; held-out test set · Amylase FLIP2 Amylase far-to-close; held-out test set Aggregation: reported point estimate FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A3; row CARP-640M likelihood; column ndcg |
| Configuration: ESMC-300M naive supervised | Protocol: FLIP2 Amylase far-to-close; held-out test set · Amylase Dataset subset: Amylase | 0.818 ± 0.002 NDCG (cutoff not stated) unitless · higher Uncertainty: ± 0.002 (type not stated) Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceESMC-300M naive supervised · FLIP2 Amylase far-to-close; held-out test set · Amylase FLIP2 Amylase far-to-close; held-out test set Aggregation: mean of five random-seed fits (Section 4.3) FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A3; row ESMC-300M naive supervised; column ndcg |
| Configuration: CARP-640M naive supervised | Protocol: FLIP2 Amylase far-to-close; held-out test set · Amylase Dataset subset: Amylase | 0.825 ± 0.009 NDCG (cutoff not stated) unitless · higher Uncertainty: ± 0.009 (type not stated) Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCARP-640M naive supervised · FLIP2 Amylase far-to-close; held-out test set · Amylase FLIP2 Amylase far-to-close; held-out test set Aggregation: mean of five random-seed fits (Section 4.3) FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A3; row CARP-640M naive supervised; column ndcg |
| Configuration: Ridge (one-hot) | Protocol: FLIP2 Amylase close-to-far; held-out test set · Amylase Dataset subset: Amylase | 0.865 NDCG (cutoff not stated) unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceRidge (one-hot) · FLIP2 Amylase close-to-far; held-out test set · Amylase FLIP2 Amylase close-to-far; held-out test set Aggregation: reported point estimate FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A2; row Ridge (one-hot); column ndcg |
| Configuration: CARP-640M supervised | Protocol: FLIP2 Amylase by-mutation; held-out test set · Amylase Dataset subset: Amylase | 0.926 ± 0.050 NDCG (cutoff not stated) unitless · higher Uncertainty: ± 0.05 (type not stated) Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCARP-640M supervised · FLIP2 Amylase by-mutation; held-out test set · Amylase FLIP2 Amylase by-mutation; held-out test set Aggregation: mean of five random-seed fits (Section 4.3) FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A4; row CARP-640M supervised; column ndcg |
| Configuration: Ridge (one-hot + likelihoods) | Protocol: FLIP2 Amylase by-mutation; held-out test set · Amylase Dataset subset: Amylase | 0.94 NDCG (cutoff not stated) unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceRidge (one-hot + likelihoods) · FLIP2 Amylase by-mutation; held-out test set · Amylase FLIP2 Amylase by-mutation; held-out test set Aggregation: reported point estimate FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A4; row Ridge (one-hot + likelihoods); column ndcg |
| Configuration: ESMC-300M naive supervised | Protocol: FLIP2 Amylase one-to-many; held-out test set · Amylase Dataset subset: Amylase | 0.850 ± 0.007 NDCG (cutoff not stated) unitless · higher Uncertainty: ± 0.007 (type not stated) Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceESMC-300M naive supervised · FLIP2 Amylase one-to-many; held-out test set · Amylase FLIP2 Amylase one-to-many; held-out test set Aggregation: mean of five random-seed fits (Section 4.3) FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A1; row ESMC-300M naive supervised; column ndcg |
| Configuration: Dayhoff likelihood | Protocol: FLIP2 Amylase far-to-close; held-out test set · Amylase Dataset subset: Amylase | 0.58 Spearman unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceDayhoff likelihood · FLIP2 Amylase far-to-close; held-out test set · Amylase FLIP2 Amylase far-to-close; held-out test set Aggregation: reported point estimate FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A3; row Dayhoff likelihood; column spearman |
| Configuration: CARP-640M likelihood | Protocol: FLIP2 Amylase far-to-close; held-out test set · Amylase Dataset subset: Amylase | 0.566 Spearman unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCARP-640M likelihood · FLIP2 Amylase far-to-close; held-out test set · Amylase FLIP2 Amylase far-to-close; held-out test set Aggregation: reported point estimate FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A3; row CARP-640M likelihood; column spearman |
| Configuration: ESMC-300M naive supervised | Protocol: FLIP2 Amylase close-to-far; held-out test set · Amylase Dataset subset: Amylase | 0.864 ± 0.012 NDCG (cutoff not stated) unitless · higher Uncertainty: ± 0.012 (type not stated) Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceESMC-300M naive supervised · FLIP2 Amylase close-to-far; held-out test set · Amylase FLIP2 Amylase close-to-far; held-out test set Aggregation: mean of five random-seed fits (Section 4.3) FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A2; row ESMC-300M naive supervised; column ndcg |
| Configuration: Ridge (one-hot + likelihoods) | Protocol: FLIP2 Amylase close-to-far; held-out test set · Amylase Dataset subset: Amylase | 0.955 NDCG (cutoff not stated) unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceRidge (one-hot + likelihoods) · FLIP2 Amylase close-to-far; held-out test set · Amylase FLIP2 Amylase close-to-far; held-out test set Aggregation: reported point estimate FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A2; row Ridge (one-hot + likelihoods); column ndcg |
| Configuration: ESMC-300M supervised | Protocol: FLIP2 Amylase by-mutation; held-out test set · Amylase Dataset subset: Amylase | 0.061 ± 0.130 Spearman unitless · higher Uncertainty: ± 0.13 (type not stated) Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceESMC-300M supervised · FLIP2 Amylase by-mutation; held-out test set · Amylase FLIP2 Amylase by-mutation; held-out test set Aggregation: mean of five random-seed fits (Section 4.3) FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A4; row ESMC-300M supervised; column spearman |
| Configuration: ESM2-650M likelihood | Protocol: FLIP2 Amylase close-to-far; held-out test set · Amylase Dataset subset: Amylase | 0.955 NDCG (cutoff not stated) unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceESM2-650M likelihood · FLIP2 Amylase close-to-far; held-out test set · Amylase FLIP2 Amylase close-to-far; held-out test set Aggregation: reported point estimate FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A2; row ESM2-650M likelihood; column ndcg |
| Configuration: CARP-640M likelihood | Protocol: FLIP2 Amylase by-mutation; held-out test set · Amylase Dataset subset: Amylase | 0.468 Spearman unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCARP-640M likelihood · FLIP2 Amylase by-mutation; held-out test set · Amylase FLIP2 Amylase by-mutation; held-out test set Aggregation: reported point estimate FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A4; row CARP-640M likelihood; column spearman |
| Configuration: ESMC-300M naive supervised | Protocol: FLIP2 Amylase close-to-far; held-out test set · Amylase Dataset subset: Amylase | 0.007 ± 0.032 Spearman unitless · higher Uncertainty: ± 0.032 (type not stated) Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceESMC-300M naive supervised · FLIP2 Amylase close-to-far; held-out test set · Amylase FLIP2 Amylase close-to-far; held-out test set Aggregation: mean of five random-seed fits (Section 4.3) FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A2; row ESMC-300M naive supervised; column spearman |
| Configuration: ESM2-650M likelihood | Protocol: FLIP2 Amylase one-to-many; held-out test set · Amylase Dataset subset: Amylase | 0.942 NDCG (cutoff not stated) unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceESM2-650M likelihood · FLIP2 Amylase one-to-many; held-out test set · Amylase FLIP2 Amylase one-to-many; held-out test set Aggregation: reported point estimate FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A1; row ESM2-650M likelihood; column ndcg |
| Configuration: CARP-640M supervised | Protocol: FLIP2 Amylase by-mutation; held-out test set · Amylase Dataset subset: Amylase | 0.551 ± 0.239 Spearman unitless · higher Uncertainty: ± 0.239 (type not stated) Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCARP-640M supervised · FLIP2 Amylase by-mutation; held-out test set · Amylase FLIP2 Amylase by-mutation; held-out test set Aggregation: mean of five random-seed fits (Section 4.3) FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A4; row CARP-640M supervised; column spearman |
| Configuration: Dayhoff likelihood | Protocol: FLIP2 Amylase by-mutation; held-out test set · Amylase Dataset subset: Amylase | 0.499 Spearman unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceDayhoff likelihood · FLIP2 Amylase by-mutation; held-out test set · Amylase FLIP2 Amylase by-mutation; held-out test set Aggregation: reported point estimate FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A4; row Dayhoff likelihood; column spearman |
| Configuration: ESMC-300M supervised | Protocol: FLIP2 Amylase one-to-many; held-out test set · Amylase Dataset subset: Amylase | 0.869 ± 0.028 NDCG (cutoff not stated) unitless · higher Uncertainty: ± 0.028 (type not stated) Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceESMC-300M supervised · FLIP2 Amylase one-to-many; held-out test set · Amylase FLIP2 Amylase one-to-many; held-out test set Aggregation: mean of five random-seed fits (Section 4.3) FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A1; row ESMC-300M supervised; column ndcg |
| Configuration: CARP-640M likelihood | Protocol: FLIP2 Amylase one-to-many; held-out test set · Amylase Dataset subset: Amylase | 0.931 NDCG (cutoff not stated) unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCARP-640M likelihood · FLIP2 Amylase one-to-many; held-out test set · Amylase FLIP2 Amylase one-to-many; held-out test set Aggregation: reported point estimate FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A1; row CARP-640M likelihood; column ndcg |
| Configuration: CARP-640M supervised | Protocol: FLIP2 Amylase one-to-many; held-out test set · Amylase Dataset subset: Amylase | 0.873 ± 0.029 NDCG (cutoff not stated) unitless · higher Uncertainty: ± 0.029 (type not stated) Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCARP-640M supervised · FLIP2 Amylase one-to-many; held-out test set · Amylase FLIP2 Amylase one-to-many; held-out test set Aggregation: mean of five random-seed fits (Section 4.3) FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A1; row CARP-640M supervised; column ndcg |
| Configuration: Dayhoff likelihood | Protocol: FLIP2 Amylase one-to-many; held-out test set · Amylase Dataset subset: Amylase | 0.522 Spearman unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceDayhoff likelihood · FLIP2 Amylase one-to-many; held-out test set · Amylase FLIP2 Amylase one-to-many; held-out test set Aggregation: reported point estimate FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A1; row Dayhoff likelihood; column spearman |
| Configuration: CARP-640M supervised | Protocol: FLIP2 Amylase far-to-close; held-out test set · Amylase Dataset subset: Amylase | 0.140 ± 0.102 Spearman unitless · higher Uncertainty: ± 0.102 (type not stated) Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCARP-640M supervised · FLIP2 Amylase far-to-close; held-out test set · Amylase FLIP2 Amylase far-to-close; held-out test set Aggregation: mean of five random-seed fits (Section 4.3) FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A3; row CARP-640M supervised; column spearman |
| Configuration: ESM2-650M likelihood | Protocol: FLIP2 Amylase one-to-many; held-out test set · Amylase Dataset subset: Amylase | 0.56 Spearman unitless · higher Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceESM2-650M likelihood · FLIP2 Amylase one-to-many; held-out test set · Amylase FLIP2 Amylase one-to-many; held-out test set Aggregation: reported point estimate FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A1; row ESM2-650M likelihood; column spearman |
| Configuration: CARP-640M supervised | Protocol: FLIP2 Amylase close-to-far; held-out test set · Amylase Dataset subset: Amylase | 0.081 ± 0.055 Spearman unitless · higher Uncertainty: ± 0.055 (type not stated) Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCARP-640M supervised · FLIP2 Amylase close-to-far; held-out test set · Amylase FLIP2 Amylase close-to-far; held-out test set Aggregation: mean of five random-seed fits (Section 4.3) FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A2; row CARP-640M supervised; column spearman |
Source checking is not independent reproduction. Release 2026-11-02-a7f03c9e55a5.
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Release 2026-11-02-a7f03c9e55a5 · Evidence verified: Not verified
Exact outcomes, predictions, identifiers and evaluator are connected.
Missing or unresolved evidence
Verified: Not verified
Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.
Missing or unresolved evidence
Verified: Not verified
A pinned recipe describes the inputs, environment and resource requirements.
Missing or unresolved evidence
Verified: Not verified
Separate data and exposure records support an independent test.
Missing or unresolved evidence
Verified: Not verified
Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.
No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.
This record describes a particular subset or cohort used in an evaluation. Its results do not describe the full dataset.
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Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
3 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Source location Table A1; row Ridge (one-hot); column spearman Context-only references | FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications Table A1; row Ridge (one-hot); column spearman Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Description Source-defined subset: Amylase. Exact membership and scoring coverage remain as reported in the cited artifact. Context-only references | FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications Table A1; row Ridge (one-hot); column spearman Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Name Amylase Context-only references | FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications Table A1; row Ridge (one-hot); column spearman Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Release 2026-11-02-a7f03c9e55a5 · Record review: discovered
Stable ID: acquired-dataset-b0b4eca267c04e159e7c