Configuration

hgT5-8195 (fine-tuned, GUANinE v1.1)

hgT5-8195: Regime U + S (unsupervised and supervised pretraining); evaluation fine-tuned; context column '511±1'.

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Evaluations and results

6 evaluations · 6 results. Different protocols are not a single leaderboard.

Sorted by Spearman (GUANinE v1.1 test set) (higher is better). The best value in each column is highlighted. Decimals are rounded for display; each value links to the printed value and its source.

Tested configuration	Protocol and dataset	Spearman (GUANinE v1.1 test set)
hgT5-8195 (fine-tuned, GUANinE v1.1)Evaluation	GUANinE v1.1 gpra-d, Spearman rho x100 (Table 2), GUANinE gpra-d test set	87.7 (best in column)
hgT5-8195 (fine-tuned, GUANinE v1.1)Evaluation	GUANinE v1.1 gpra-c, Spearman rho x100 (Table 2), GUANinE gpra-c test set	84.1
hgT5-8195 (fine-tuned, GUANinE v1.1)Evaluation	GUANinE v1.1 cons30, Spearman rho x100 (Table 2), GUANinE cons30 test set	59.4
hgT5-8195 (fine-tuned, GUANinE v1.1)Evaluation	GUANinE v1.1 dnase-propensity, Spearman rho x100 (Table 2), GUANinE dnase-propensity test set	56.6
hgT5-8195 (fine-tuned, GUANinE v1.1)Evaluation	GUANinE v1.1 cons100, Spearman rho x100 (Table 2), GUANinE cons100 test set	46.2
hgT5-8195 (fine-tuned, GUANinE v1.1)Evaluation	GUANinE v1.1 ccre-propensity, Spearman rho x100 (Table 2), GUANinE ccre-propensity test set	36.1

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Tested configuration	Protocol and dataset	Finding	Evidence and details
Configuration: hgT5-8195 (fine-tuned, GUANinE v1.1)	Protocol: GUANinE v1.1 ccre-propensity, Spearman rho x100 (Table 2) Dataset: GUANinE ccre-propensity test set	36.1 Spearman (GUANinE v1.1 test set) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source hgT5-8195 on GUANinE ccre-propensity lit-genomics-20261011-guanine-protocol-ccre-propensity Aggregation: Not reported GUANinE v1.1 reveals complementarity of supervised and genomic language models · Table 2, row 'hgT5-8195', column 'ccre-propensity' (ρ)
Configuration: hgT5-8195 (fine-tuned, GUANinE v1.1)	Protocol: GUANinE v1.1 cons100, Spearman rho x100 (Table 2) Dataset: GUANinE cons100 test set	46.2 Spearman (GUANinE v1.1 test set) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source hgT5-8195 on GUANinE cons100 lit-genomics-20261011-guanine-protocol-cons100 Aggregation: Not reported GUANinE v1.1 reveals complementarity of supervised and genomic language models · Table 2, row 'hgT5-8195', column 'cons100' (ρ)
Configuration: hgT5-8195 (fine-tuned, GUANinE v1.1)	Protocol: GUANinE v1.1 cons30, Spearman rho x100 (Table 2) Dataset: GUANinE cons30 test set	59.4 Spearman (GUANinE v1.1 test set) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source hgT5-8195 on GUANinE cons30 lit-genomics-20261011-guanine-protocol-cons30 Aggregation: Not reported GUANinE v1.1 reveals complementarity of supervised and genomic language models · Table 2, row 'hgT5-8195', column 'cons30' (ρ)
Configuration: hgT5-8195 (fine-tuned, GUANinE v1.1)	Protocol: GUANinE v1.1 dnase-propensity, Spearman rho x100 (Table 2) Dataset: GUANinE dnase-propensity test set	56.6 Spearman (GUANinE v1.1 test set) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source hgT5-8195 on GUANinE dnase-propensity lit-genomics-20261011-guanine-protocol-dnase-propensity Aggregation: Not reported GUANinE v1.1 reveals complementarity of supervised and genomic language models · Table 2, row 'hgT5-8195', column 'dnase-propensity' (ρ)
Configuration: hgT5-8195 (fine-tuned, GUANinE v1.1)	Protocol: GUANinE v1.1 gpra-c, Spearman rho x100 (Table 2) Dataset: GUANinE gpra-c test set	84.1 Spearman (GUANinE v1.1 test set) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source hgT5-8195 on GUANinE gpra-c lit-genomics-20261011-guanine-protocol-gpra-c Aggregation: Not reported GUANinE v1.1 reveals complementarity of supervised and genomic language models · Table 2, row 'hgT5-8195', column 'gpra-c' (ρ)
Configuration: hgT5-8195 (fine-tuned, GUANinE v1.1)	Protocol: GUANinE v1.1 gpra-d, Spearman rho x100 (Table 2) Dataset: GUANinE gpra-d test set	87.7 Spearman (GUANinE v1.1 test set) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source hgT5-8195 on GUANinE gpra-d lit-genomics-20261011-guanine-protocol-gpra-d Aggregation: Not reported GUANinE v1.1 reveals complementarity of supervised and genomic language models · Table 2, row 'hgT5-8195', column 'gpra-d' (ρ)

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Release 2026-10-22-1b7cf027e4f6 · Record review: source checked

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GUANinE v1.1 reveals complementarity of supervised and genomic language models · Original source · Bioinformatics 2026, btag427 (issue date 2026-08-01); PMC13501288 full-text XML

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Technical metadata and extraction receipts

Stable ID: lit-genomics-20261011-guanine-config-hgt5-8195-ft

areas: dna-genomes
contexts: research
method types: foundation_model
reported name: hgT5-8195
foundation model eligible: true
parameters: Regime U + S (unsupervised and supervised pretraining); evaluation fine-tuned; context column '511±1'
source locator: Table 2 row 'hgT5-8195', columns Reg., Eval. and Context
access reuse: Not stated in the source; see the model's own release
missing metadata: version: reason: unreported; note: Only the printed row label identifies the checkpoint
provenance note: hgT5-8195 as evaluated in GUANinE v1.1.

Related records

configuration of: hgT5
system: hgT5-8195 on GUANinE ccre-propensity
system: hgT5-8195 on GUANinE cons100
system: hgT5-8195 on GUANinE cons30
system: hgT5-8195 on GUANinE dnase-propensity
system: hgT5-8195 on GUANinE gpra-c
system: hgT5-8195 on GUANinE gpra-d

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