rewire.itbenchmarks
Dataset subset

FLIP AAV, 2-vs-rest split (FLIP split)

The split of FLIP AAV, 2-vs-rest split that FLIP evaluated on. The upstream dataset release is not catalogued here, so no claim is made that this matches its original splits.

Research readiness

These checks assess whether the evidence supports a reproducible investigation. A source-checked score alone does not meet these requirements.

Release 2026-09-29-06401fd5b220 · Evidence verified: Not verified

Evidence incomplete

Replay metrics

Exact outcomes, predictions, identifiers and evaluator are connected.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • metric replay: verification is missing

Verified: Not verified

Evidence incomplete

Investigate discrepancies

Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • metric replay: verification is missing
  • annotations: verification is missing
  • dependence: verification is missing

Verified: Not verified

Evidence incomplete

Run locally

A pinned recipe describes the inputs, environment and resource requirements.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • recipe pinned: verification is missing
  • resource estimate: verification is missing

Verified: Not verified

Evidence incomplete

Validate independently

Separate data and exposure records support an independent test.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • independent validation: verification is missing
  • overlap checked: verification is missing

Verified: Not verified

Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.

Artifacts and reproduction

No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.

Read reviewed discrepancy investigations

Evaluation results

12 evaluations · 12 results. Different protocols are not a single leaderboard.

Filter evaluations

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configurationProtocol and datasetFindingEvidence and details
Method: CNNTask: FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split
Dataset subset: FLIP AAV, 2-vs-rest split (FLIP split)
0.74 spearman
correlation · higher

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

CNN on FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split

Trained on the split's training set with ten percent held out for validation, scored on its test set.

Aggregation: Not reported

flip primary benchmark evidence · Table 5, row(CNN), column(2-vs-rest)
Configuration: ESM-1b (mean)Task: FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split
Dataset subset: FLIP AAV, 2-vs-rest split (FLIP split)
0.26 spearman
correlation · higher

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ESM-1b (mean) on FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split

Trained on the split's training set with ten percent held out for validation, scored on its test set.

Aggregation: Not reported

flip primary benchmark evidence · Table 5, row(ESM-1b (mean)), column(2-vs-rest)
Configuration: ESM-1b (mut mean)Task: FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split
Dataset subset: FLIP AAV, 2-vs-rest split (FLIP split)
0.65 spearman
correlation · higher

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ESM-1b (mut mean) on FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split

Trained on the split's training set with ten percent held out for validation, scored on its test set.

Aggregation: Not reported

flip primary benchmark evidence · Table 5, row(ESM-1b (mut mean)), column(2-vs-rest)
Configuration: ESM-1b (per AA)Task: FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split
Dataset subset: FLIP AAV, 2-vs-rest split (FLIP split)
0.65 spearman
correlation · higher

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ESM-1b (per AA) on FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split

Trained on the split's training set with ten percent held out for validation, scored on its test set.

Aggregation: Not reported

flip primary benchmark evidence · Table 5, row(ESM-1b (per AA)), column(2-vs-rest)
Configuration: ESM-1v (mean)Task: FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split
Dataset subset: FLIP AAV, 2-vs-rest split (FLIP split)
0.16 spearman
correlation · higher

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ESM-1v (mean) on FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split

Trained on the split's training set with ten percent held out for validation, scored on its test set.

Aggregation: Not reported

flip primary benchmark evidence · Table 5, row(ESM-1v (mean)), column(2-vs-rest)
Configuration: ESM-1v (mut mean)Task: FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split
Dataset subset: FLIP AAV, 2-vs-rest split (FLIP split)
0.64 spearman
correlation · higher

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ESM-1v (mut mean) on FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split

Trained on the split's training set with ten percent held out for validation, scored on its test set.

Aggregation: Not reported

flip primary benchmark evidence · Table 5, row(ESM-1v (mut mean)), column(2-vs-rest)
Configuration: ESM-1v (per AA)Task: FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split
Dataset subset: FLIP AAV, 2-vs-rest split (FLIP split)
0.7 spearman
correlation · higher

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ESM-1v (per AA) on FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split

Trained on the split's training set with ten percent held out for validation, scored on its test set.

Aggregation: Not reported

flip primary benchmark evidence · Table 5, row(ESM-1v (per AA)), column(2-vs-rest)
Configuration: ESM-untrained (mean)Task: FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split
Dataset subset: FLIP AAV, 2-vs-rest split (FLIP split)
0.14 spearman
correlation · higher

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ESM-untrained (mean) on FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split

Trained on the split's training set with ten percent held out for validation, scored on its test set.

Aggregation: Not reported

flip primary benchmark evidence · Table 5, row(ESM-untrained (mean)), column(2-vs-rest)
Configuration: ESM-untrained (mut mean)Task: FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split
Dataset subset: FLIP AAV, 2-vs-rest split (FLIP split)
0.16 spearman
correlation · higher

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ESM-untrained (mut mean) on FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split

Trained on the split's training set with ten percent held out for validation, scored on its test set.

Aggregation: Not reported

flip primary benchmark evidence · Table 5, row(ESM-untrained (mut mean)), column(2-vs-rest)
Configuration: ESM-untrained (per AA)Task: FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split
Dataset subset: FLIP AAV, 2-vs-rest split (FLIP split)
0.22 spearman
correlation · higher

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ESM-untrained (per AA) on FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split

Trained on the split's training set with ten percent held out for validation, scored on its test set.

Aggregation: Not reported

flip primary benchmark evidence · Table 5, row(ESM-untrained (per AA)), column(2-vs-rest)
Method: LevenshteinTask: FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split
Dataset subset: FLIP AAV, 2-vs-rest split (FLIP split)
0.57 spearman
correlation · higher

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Levenshtein on FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split

Trained on the split's training set with ten percent held out for validation, scored on its test set.

Aggregation: Not reported

flip primary benchmark evidence · Table 5, row(Levenshtein), column(2-vs-rest)
Method: RidgeTask: FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split
Dataset subset: FLIP AAV, 2-vs-rest split (FLIP split)
0.03 spearman
correlation · higher

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Ridge on FLIP AAV-2-VS-REST: AAV fitness prediction, 2-vs-rest split

Trained on the split's training set with ten percent held out for validation, scored on its test set.

Aggregation: Not reported

flip primary benchmark evidence · Table 5, row(Ridge), column(2-vs-rest)

Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.

Subset and evaluation context

This record describes a particular subset or cohort used in an evaluation. Its results do not describe the full dataset.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

2 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statementOriginal source and locationReview and provenance
description
The split of FLIP AAV, 2-vs-rest split that FLIP evaluated on. The upstream dataset release is not catalogued here, so no claim is made that this matches its original splits.
Context-only references
flip primary benchmark evidence

Original source ↗

No field-specific location recorded

Version: 2021 manuscript
Retrieved: 2026-09-16T21:07:13.889041+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: afcf360c88a7a4ae153b3c2d8d4fa6d4ac0abe84f2131b94409abff6447ce363

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

name
FLIP AAV, 2-vs-rest split (FLIP split)
Context-only references
flip primary benchmark evidence

Original source ↗

No field-specific location recorded

Version: 2021 manuscript
Retrieved: 2026-09-16T21:07:13.889041+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: name

Source artifact SHA-256: afcf360c88a7a4ae153b3c2d8d4fa6d4ac0abe84f2131b94409abff6447ce363

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Sources and history

View linked audit checks and correction history

Release 2026-09-29-06401fd5b220 · Record review: source checked

1 source records and release historyDownload this release
Technical metadata and extraction receipts

Stable ID: flip-dataset-flip-aav-2-vs-rest-split

areas
proteins-complexes
missing metadata
version: unreported; url: unextracted
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