ProkBERT family: genomic language models for microbiome applications
2024 · PMC10810988.1 · Peer-reviewed
What this source contributed
Records in this release that cite this source. A record can cite several sources.
Results
Values as the source printed them. Compare results only under compatible protocols, datasets and metrics.
Claims
Statements this source supports, each with where in the source it was checked.
- ProkBERT-mini: family ProkBERT: Family ProkBERT (2 Materials and methods/2.1 Sequence data/2.1.1 Sequence segmentation and tokenization (paragraph 6); 4 Conclusion (paragraph 5); ProkBERT official README variant list and primary paper Table 1)
- Reported Accuracy for ProkBERT-mini: Printed value 0.87 (Table 3, ProkBERT-mini row, Accuracy column)
- Reported Accuracy for Promotech: Printed value 0.71 (Table 3, Promotech row, Accuracy column)
Models, benchmarks and other records
Configurations (2)
Tasks (1)
Datasets (1)
Evaluations (2)
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
18 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Artifact retrieved at 2026-09-16T10:33:36.197Z Source metadata | ProkBERT family: genomic language models for microbiome applications No field-specific location recorded Version: PMC10810988.1 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Artifact SHA-256 8610e2a54aa877c8dc565a9cdb6e82099f284c5e0907a52cab18d994ea732436 Source metadata | ProkBERT family: genomic language models for microbiome applications No field-specific location recorded Version: PMC10810988.1 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Artifact url https://www.ebi.ac.uk/europepmc/webservices/rest/PMC10810988/fullTextXML Source metadata | ProkBERT family: genomic language models for microbiome applications No field-specific location recorded Version: PMC10810988.1 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Doi 10.3389/fmicb.2023.1331233 Source metadata | ProkBERT family: genomic language models for microbiome applications No field-specific location recorded Version: PMC10810988.1 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Missing metadata: licence: reason unextracted Source metadata | ProkBERT family: genomic language models for microbiome applications No field-specific location recorded Version: PMC10810988.1 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Publication status peer_reviewed Source metadata | ProkBERT family: genomic language models for microbiome applications No field-specific location recorded Version: PMC10810988.1 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Retrieved at 2026-09-15T23:25:00Z Source metadata | ProkBERT family: genomic language models for microbiome applications No field-specific location recorded Version: PMC10810988.1 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Scope decision included Source metadata | ProkBERT family: genomic language models for microbiome applications No field-specific location recorded Version: PMC10810988.1 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Url https://pmc.ncbi.nlm.nih.gov/articles/PMC10810988/ Source metadata | ProkBERT family: genomic language models for microbiome applications No field-specific location recorded Version: PMC10810988.1 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Version PMC10810988.1 Source metadata | ProkBERT family: genomic language models for microbiome applications No field-specific location recorded Version: PMC10810988.1 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Sources and history
Release 2026-11-02-a7f03c9e55a5 · Record review: discovered
Primary paper retained with its original identifier. Metadata inherited from the literature collection; individual result checks are separate.
Technical metadata and extraction receipts
Stable ID: prokbert-2024
- areas
- microbes-communities
- url
- https://pmc.ncbi.nlm.nih.gov/articles/PMC10810988/
- version
- PMC10810988.1
- retrieved at
- 2026-09-15T23:25:00Z
- doi
- 10.3389/fmicb.2023.1331233
- publication status
- peer_reviewed
- year
- 2024
- artifact sha256
- 8610e2a54aa877c8dc565a9cdb6e82099f284c5e0907a52cab18d994ea732436
- artifact url
- https://www.ebi.ac.uk/europepmc/webservices/rest/PMC10810988/fullTextXML
- artifact retrieved at
- 2026-09-16T10:33:36.197Z
- scope decision
- included
- missing metadata
- licence: reason: unextracted