These checks assess whether the evidence supports a reproducible investigation. A source-checked score alone does not meet these requirements.
Release 2026-09-29-06401fd5b220 · Evidence verified: Not verified
Exact outcomes, predictions, identifiers and evaluator are connected.
Missing or unresolved evidence
Verified: Not verified
Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.
Missing or unresolved evidence
Verified: Not verified
A pinned recipe describes the inputs, environment and resource requirements.
Missing or unresolved evidence
Verified: Not verified
Separate data and exposure records support an independent test.
Missing or unresolved evidence
Verified: Not verified
Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.
No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.
1 evaluation · 4 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: Promotech | Protocol: E. coli sigma70 independent promoter test (E. coli sigma70 promoter prediction) Dataset: E. coli sigma70 promoter dataset | 0.71 Accuracy unitless · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourcePromotech: E. coli sigma70 promoter prediction Test-only evaluation on Cassiano and Silva-Rocha 2020 data; methods have different training histories. 865 high-evidence RegulonDB 10.5 promoters and 1,000 nucleotide-distribution-matched negative sequences. Promoter exact matches removed from model training. Aggregation: Not reported ProkBERT family: genomic language models for microbiome applications; ProkBERT family: genomic language models for microbiome applications · Table 3, Promotech row, Accuracy column |
| Configuration: Promotech | Protocol: E. coli sigma70 independent promoter test (E. coli sigma70 promoter prediction) Dataset: E. coli sigma70 promoter dataset | 0.49 Sensitivity fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourcePromotech: E. coli sigma70 promoter prediction Test-only evaluation on Cassiano and Silva-Rocha 2020 data; methods have different training histories. 865 high-evidence RegulonDB 10.5 promoters and 1,000 nucleotide-distribution-matched negative sequences. Promoter exact matches removed from model training. Aggregation: Not reported ProkBERT family: genomic language models for microbiome applications · Table 3, row Promotech, column Sensitivity; XML row13 column4 |
| Configuration: Promotech | Protocol: E. coli sigma70 independent promoter test (E. coli sigma70 promoter prediction) Dataset: E. coli sigma70 promoter dataset | 0.43 MCC dimensionless · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourcePromotech: E. coli sigma70 promoter prediction Test-only evaluation on Cassiano and Silva-Rocha 2020 data; methods have different training histories. 865 high-evidence RegulonDB 10.5 promoters and 1,000 nucleotide-distribution-matched negative sequences. Promoter exact matches removed from model training. Aggregation: Not reported ProkBERT family: genomic language models for microbiome applications · Table 3, row Promotech, column MCC; XML row13 column3 |
| Configuration: Promotech | Protocol: E. coli sigma70 independent promoter test (E. coli sigma70 promoter prediction) Dataset: E. coli sigma70 promoter dataset | 0.9 Specificity fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourcePromotech: E. coli sigma70 promoter prediction Test-only evaluation on Cassiano and Silva-Rocha 2020 data; methods have different training histories. 865 high-evidence RegulonDB 10.5 promoters and 1,000 nucleotide-distribution-matched negative sequences. Promoter exact matches removed from model training. Aggregation: Not reported ProkBERT family: genomic language models for microbiome applications · Table 3, row Promotech, column Specificity; XML row13 column5 |
Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.
Test-only evaluation on Cassiano and Silva-Rocha 2020 data; methods have different training histories. 865 high-evidence RegulonDB 10.5 promoters and 1,000 nucleotide-distribution-matched negative sequences. Promoter exact matches removed from model training.
Metadata review: needs review. Unreported conditions prevent automatic comparisons.
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
38 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.comparison.adaptation Paper-specific evaluated pipeline; exact checkpoint not inferred from label Context-only references | ProkBERT family: genomic language models for microbiome applications Table 3: Specificity, E. coli sigma70 independent promoter test Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC10810988.1 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.adaptation Paper-specific evaluated pipeline; exact checkpoint not inferred from label Context-only references | ProkBERT family: genomic language models for microbiome applications Table 3: Specificity, E. coli sigma70 independent promoter test Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC10810988.1 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.aggregation Not reported Context-only references | ProkBERT family: genomic language models for microbiome applications Table 3: Specificity, E. coli sigma70 independent promoter test Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC10810988.1 | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.aggregation Not reported Context-only references | ProkBERT family: genomic language models for microbiome applications Table 3: Specificity, E. coli sigma70 independent promoter test Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC10810988.1 | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.budget Not reported Context-only references | ProkBERT family: genomic language models for microbiome applications Table 3: Specificity, E. coli sigma70 independent promoter test Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC10810988.1 | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.budget Not reported Context-only references | ProkBERT family: genomic language models for microbiome applications Table 3: Specificity, E. coli sigma70 independent promoter test Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC10810988.1 | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.dataset_version Not reported Context-only references | ProkBERT family: genomic language models for microbiome applications Table 3: Specificity, E. coli sigma70 independent promoter test Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC10810988.1 | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.dataset_version Not reported Context-only references | ProkBERT family: genomic language models for microbiome applications Table 3: Specificity, E. coli sigma70 independent promoter test Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC10810988.1 | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.inputs Not reported Context-only references | ProkBERT family: genomic language models for microbiome applications Table 3: Specificity, E. coli sigma70 independent promoter test Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC10810988.1 | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.inputs Not reported Context-only references | ProkBERT family: genomic language models for microbiome applications Table 3: Specificity, E. coli sigma70 independent promoter test Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC10810988.1 | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
View linked audit checks and correction history
Release 2026-09-29-06401fd5b220 · Record review: needs review
Stable ID: evaluation-lit-034