CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.
Overview
Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Results
Each comparison retains its reviewed evaluation scope, dataset and metric. Results are shown without a pooled ranking.
CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Accuracy (bp)
Accuracy (bp) (fraction) · Higher values are better.
CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly · marmgCAMI2_short_read_pooled_gold_standard_assembly
Evidence origin: Independent external evaluation.
CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Accuracy (bp) through line 17; Tool=Vamb fa045c0 (J1); column Accuracy (bp)- Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.
Comparison details and limitations
Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.
- Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.
- Exact source-defined evaluation scope; reported scores are not rewire reproductions.
Automated source review: 2026-09-19. Numerical source review does not establish independent reproduction.
Dots show point estimates. Whiskers show only explicitly defined uncertainty (standard deviation, standard error or a labelled interval); their definitions remain in Table. Unresolved uncertainty is not plotted. Differences do not establish statistical significance.
Showing 12 of 16 matching rows.
Methods and evaluation design
Procedure, tasks and evaluated configurations
Evaluation design
Benchmarks bring together tasks and protocols. A task describes the biological question; a protocol defines a particular test.
Benchmarks
These source-backed links do not make different protocols or scores interchangeable.
Recorded evaluations
Each evaluation records what was tested and under which conditions.
- MetaBinner 1.0 (B2) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- MaxBin 2.0.2 (F2) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- MetaWRAP 1.2.3 (D1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- MetaBinner 1.0 (B3) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- MetaBAT 0.25.4 (A3) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- MetaBAT 2.13-33 (A1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- CONCOCT 0.4.1 (G2) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- MaxBin 2.2.7 (F1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- UltraBinner 1.0 (E1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- Vamb fa045c0 (J1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- Autometa cami2-146383e (C1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
Baseline coverage
Reference methods help show what a model adds beyond simple controls. We track a null control and a conventional method for each protocol.
0 of 2 active baseline roles have published Rewire measurements in this release. Measurements on a selected protocol do not establish coverage of an entire suite.
No execution recipe linked to this protocol. Recipe availability does not establish a completed evaluation.
No reviewed evaluations with results linked in this release.
Literature evidence is not a Rewire measurement. Executed but unpublished runs and private review status are not included.
Null control
Proposed control: requires review
Protocol-valid abundance or assignment control
Protocol-specific applicability, permitted inputs, access, split, evaluator and execution requirements need review before implementation or execution.
This is a suggested selection rule, not a validated method or a measured score.
Conventional reference
Proposed control: requires review
Conventional reference-database method with pinned taxonomy/database
Protocol-specific applicability, permitted inputs, access, split, evaluator and execution requirements need review before implementation or execution.
This is a suggested selection rule, not a validated method or a measured score.
Protocol coverage CSV · Model evaluation matrix · Source table · Release and checksums
Coverage is derived from release 2026-09-29-06401fd5b220. Source citations describe the original records; they do not validate an unreviewed baseline proposal. No results have been generated by this audit.
Run instructions
No runnable recipe has been reviewed for this protocol. Dataset access, model requirements, licences and compute requirements must be checked against its sources before execution.
Strengths, limitations and unresolved questions
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
1 evidence row matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Relationship: part of discovery-benchmark-cami Individual claims | CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca line 2; Tool=Gold standard; column Accuracy (bp) Version: 501b543f65d62e5c1d6c3813be0badcac5e079ca | source checked ai assisted source review · 2026-09-19 Audit detailsField: Claim: acquired-membership-b72d30b9f2e8f2cb48ab Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
Sources and history
View linked audit checks and correction history
Release 2026-09-29-06401fd5b220 · Record review: discovered
1 source records and release history
- CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · Original source · 501b543f65d62e5c1d6c3813be0badcac5e079ca
Technical metadata and extraction receipts
Stable ID: acquired-protocol-f443b5fdaee9129f2b7a
- source locator
- line 2; Tool=Gold standard; column Accuracy (bp)
- procedure
- CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded
- comparison panels
- id: acquired-figure-0f344fb35e8f48d62e2c; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Accuracy (bp); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Accuracy (bp); unit: fraction; direction: higher; result ids: acquired-result-5daa9501d8f08de0db2d; acquired-result-ddd0d1cf4f5e388ffb15; acquired-result-156a469deeb8a3abd31e; acquired-result-8797b60869558d20d4df; acquired-result-5617c8c8c585b9805105; acquired-result-69794fafe321888f3276; acquired-result-baed571f338cdcb4ae43; acquired-result-af8dc1fa04df18136d2b; acquired-result-a77f940292ea560f1a14; acquired-result-b387154f84a823220fbe; acquired-result-5e559dc700efff1749fd; acquired-result-d6ce1f07e9c91b2d0319; acquired-result-81903eb35963478c6444; acquired-result-3798083edce4316bd7de; acquired-result-2bdadb67285fc81452a3; acquired-result-eb61b93754c8f37ec874; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Accuracy (bp) through line 17; Tool=Vamb fa045c0 (J1); column Accuracy (bp); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-22d0344ab306bd0c87bd; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Accuracy (seq); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Accuracy (seq); unit: fraction; direction: higher; result ids: acquired-result-8c5cb9081ffb93cd7608; acquired-result-7c9bc32206b8b127af70; acquired-result-c0d6ac6b345175f2ce23; acquired-result-f0248860d41459c2c5fa; acquired-result-b4063a7201781bb0be44; acquired-result-66e3377dc8cc1a627463; acquired-result-33f8df86051a8af162b8; acquired-result-72b3dd23d353e9b4c00c; acquired-result-fdd7b7a080ab1f26fc34; acquired-result-b98290a8fa685938fcab; acquired-result-fa7d7e8c59ab7bc6c5a6; acquired-result-fb97119978969054e191; acquired-result-475d1a204b4ee2b75184; acquired-result-cfb0d78e24efafdeab4b; acquired-result-c4dcfe1a47dfa1fad3e6; acquired-result-2ad60b3d27a9cb75c521; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Accuracy (seq) through line 17; Tool=Vamb fa045c0 (J1); column Accuracy (seq); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-3f44eb1d191b27fbe9d0; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Adjusted Rand index (bp); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Adjusted Rand index (bp); unit: dimensionless; direction: higher; result ids: acquired-result-36056d130d9cd6631440; acquired-result-7a0e25c03402709c5c8e; acquired-result-404b2dd6c773f6522caf; acquired-result-8c1898a1814c114bcabf; acquired-result-1b76983dba27d05e0c8a; acquired-result-da15aab29a2d99557ffb; acquired-result-1328ec376a2970299b8a; acquired-result-f1c7f8ccdf9ae848f82d; acquired-result-9c317ab9a8386c357ad0; acquired-result-b4cb268f4d116a9c61bf; acquired-result-01bb4053ce292cceddab; acquired-result-8abe3c0023f52b14ea12; acquired-result-4500bd066fb7ae4e6653; acquired-result-566bdd78ef77504daf52; acquired-result-f53eb3f135367bf757ca; acquired-result-ae1532cacb0f95722deb; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Adjusted Rand index (bp) through line 17; Tool=Vamb fa045c0 (J1); column Adjusted Rand index (bp); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-fc41a9ea6556cc6754fa; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Adjusted Rand index (seq); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Adjusted Rand index (seq); unit: dimensionless; direction: higher; result ids: acquired-result-ff2bda874b3b789cf416; acquired-result-f29516c0abc34d5a76cc; acquired-result-200622a2a44f28a0b922; acquired-result-00f809040c5bc5bfac65; acquired-result-08dcdf1f9bd6e59fbfd3; acquired-result-87a8ea971b97bd703ff0; acquired-result-9a1ddb5802c151a9741f; acquired-result-c44dc90e0875f657d80f; acquired-result-2795c346046cf37e21f9; acquired-result-7e92e378313cf7211875; acquired-result-216ae8b9df80b6cc672c; acquired-result-6ce6b7a5faee2c574142; acquired-result-d63bf8969644d213d13d; acquired-result-3b3b0735f60f2b016994; acquired-result-34719fde93e69f87c7ba; acquired-result-b0d8773745ddbfb45172; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Adjusted Rand index (seq) through line 17; Tool=Vamb fa045c0 (J1); column Adjusted Rand index (seq); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-0f96245d3f7fbb94ad1c; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Average completeness (bp); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Average completeness (bp); unit: fraction; direction: higher; result ids: acquired-result-1a1a5bf00484ff52b506; acquired-result-2e7f78fa71f921409c0b; acquired-result-d2813767cf68490c2b18; acquired-result-075e26f528bbae35e41f; acquired-result-00387aaf19bd34d662f5; acquired-result-23079d87167e90662eba; acquired-result-419cbec8980ed7fbac8f; acquired-result-79ba4b83308896126423; acquired-result-fe79b5c7d072507449a7; acquired-result-2633b5baa2f013cc791a; acquired-result-68f5d332d0d443944f80; acquired-result-23c972811e114255d1b4; acquired-result-4db456a7dd13ad1e43ab; acquired-result-61b6873af28a4d36acdb; acquired-result-dffdff31030c5f14ea3b; acquired-result-050c771e52ee824b5cd9; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Average completeness (bp) through line 17; Tool=Vamb fa045c0 (J1); column Average completeness (bp); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-e54a995cc70811981a52; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Average completeness (seq); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Average completeness (seq); unit: fraction; direction: higher; result ids: acquired-result-9e7080de6eda74c86f81; acquired-result-ca4b8efedabc471bd708; acquired-result-96c129bfd32247ec3f30; acquired-result-9cdbe35c3943ad051e7c; acquired-result-3f12dbc0fd910fbfdddb; acquired-result-4a774e104193f7f02235; acquired-result-a19b7bfa8bf9ab901b9a; acquired-result-1044f34ee53fce8671e8; acquired-result-ae90f9a3f81ff7d30120; acquired-result-d07ffa3fa32b0556534f; acquired-result-fae256b9f4cd77281e7c; acquired-result-ffa527f49018a2c337be; acquired-result-8ee864efd5f8465a2521; acquired-result-9cf3ea4778f977be49cd; acquired-result-ee31542412b5c699f123; acquired-result-b046026182f84f00c7ec; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Average completeness (seq) through line 17; Tool=Vamb fa045c0 (J1); column Average completeness (seq); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-90099e538e7d28f1730a; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Average purity (bp); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Average purity (bp); unit: fraction; direction: higher; result ids: acquired-result-a9b63fc430a854749ad0; acquired-result-aaad21d449875f3a0fe3; acquired-result-1e3077fd9361b65f9404; acquired-result-5e67ead8568e0ed45e98; acquired-result-6141eca4fda56f555bf8; acquired-result-a1343c39074eb1b87ed9; acquired-result-d7ee2544479033684c2c; acquired-result-7d11cea96168a96fed1c; acquired-result-27295f9b57bd36fb0f20; acquired-result-2c491b12ad7c90f71f82; acquired-result-58ff6d661803ce2f8807; acquired-result-32a694ecdb3102dfeb94; acquired-result-ebd218754f0b13a8b70b; acquired-result-84a44f1355351fa7a6c3; acquired-result-168ef575b5f71785a10f; acquired-result-d6c5e7a611138f461d36; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Average purity (bp) through line 17; Tool=Vamb fa045c0 (J1); column Average purity (bp); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-358e72d88ae829801594; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Average purity (seq); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Average purity (seq); unit: fraction; direction: higher; result ids: acquired-result-2d228753b978ca2066ba; acquired-result-721e900892d4638aeac0; acquired-result-f5afdbad322d46659d3c; acquired-result-5e6be8de491c396c34d5; acquired-result-464da0183a1cae2ec4e5; acquired-result-b28a32bdd3dc9f58d752; acquired-result-a0066a4926ddb9189813; acquired-result-8625c2a7b9e402a5137a; acquired-result-ef978261223802494182; acquired-result-4b06c117dd3d4c9dde40; acquired-result-5ee5060e850725cd1519; acquired-result-0ab38414b2984a43e51f; acquired-result-f5dc2abca85d14c9f7a2; acquired-result-c3bbe2d03da6440555c9; acquired-result-4018957f66bfb7c3606c; acquired-result-50da59a2224c347cdf42; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Average purity (seq) through line 17; Tool=Vamb fa045c0 (J1); column Average purity (seq); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-a8a081d8f2a4db908447; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Completeness (bp); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Completeness (bp); unit: fraction; direction: higher; result ids: acquired-result-8b0eee9fdd120a98c35a; acquired-result-2958adceff9c9536b6e1; acquired-result-3bf2e18fc09dccc41a55; acquired-result-4c95a9e1a8bee7caf19c; acquired-result-84007e97d7f5839e16d7; acquired-result-bc076b39334a1490f0dc; acquired-result-be304b6ada34859e81c8; acquired-result-ecf8857821da20506a60; acquired-result-875baf74aee532e1dec9; acquired-result-4e2b92435ae3fee40c18; acquired-result-46adb6dbe91f20897bcf; acquired-result-dfea1c195e403e52b3c2; acquired-result-0c512395730178a2f231; acquired-result-af8ab4208c6ee0912d79; acquired-result-20577a46406a1abfc448; acquired-result-897d3d167508e3062e65; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Completeness (bp) through line 17; Tool=Vamb fa045c0 (J1); column Completeness (bp); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-847eed561a9e09b37639; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Completeness (seq); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Completeness (seq); unit: fraction; direction: higher; result ids: acquired-result-f41d4d536b89151301f2; acquired-result-b380311525f53a2777c5; acquired-result-59049ddcd83c068efd59; acquired-result-4824206548634aa65452; acquired-result-16258237b153d634f73a; acquired-result-eb37a285075fea83551a; acquired-result-b596e1473ebe191a0d09; acquired-result-20c66fd48766ef64e710; acquired-result-c27dc040f482e9b9fbb5; acquired-result-9fa0c23e9fb54d6efa92; acquired-result-86c4cd4682c9e9cc8be3; acquired-result-6258642bb1d7d14fe4a5; acquired-result-70736eb162a93a9a1302; acquired-result-63ec2f8870f2edd5fb1b; acquired-result-5db168a86f7cf9e81327; acquired-result-c8d46d59078f98497584; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Completeness (seq) through line 17; Tool=Vamb fa045c0 (J1); column Completeness (seq); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-7d99a4765dd62dcc7df6; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: F1 score (bp); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: F1 score (bp); unit: fraction; direction: higher; result ids: acquired-result-6fee6fd69ec6211bcae7; acquired-result-03bac26a9e5c15ab7c1f; acquired-result-ff1a1245a96fa182a4a4; acquired-result-4532aa03e84cbea1c41b; acquired-result-53d8dfba4ec3b3706ea1; acquired-result-8b942ac96879ad5825b8; acquired-result-a5c27b37c449fbd550f8; acquired-result-99081a66e792a8d4d4a8; acquired-result-3d9649434ed5d681470a; acquired-result-1be3a6924ecd0c2560b8; acquired-result-20ec75e582e0d75c26f0; acquired-result-7feec973b155e8aef8ae; acquired-result-8baa96a2704d1325bd9b; acquired-result-74011b130f0a23237dc4; acquired-result-7fc7f22f4789853f85a5; acquired-result-a30aa3645ee3835d2cf3; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column F1 score (bp) through line 17; Tool=Vamb fa045c0 (J1); column F1 score (bp); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-8842f10d09ff776f7b2b; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: F1 score (seq); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: F1 score (seq); unit: fraction; direction: higher; result ids: acquired-result-737889abffd25a38179e; acquired-result-6ce55896619d3b47bf40; acquired-result-14dce89c88b2db15adf2; acquired-result-11f449ebe33e045759c4; acquired-result-6bd87f2805e7aaf3636e; acquired-result-f7ac4a4602754f945b10; acquired-result-a93ab9e49e41d5148c8e; acquired-result-1fa46707fd9bbe1000f5; acquired-result-3e1499e307dffbd80073; acquired-result-34c6d8715ed2449f32d8; acquired-result-648ce0d4dc4136314eb8; acquired-result-07a211aab595f82af5a3; acquired-result-0eec898e9358833fcb2c; acquired-result-421a02e85368cbc65b9e; acquired-result-4f7aced6ff205aeb3f94; acquired-result-5c5836f0cd01540826f1; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column F1 score (seq) through line 17; Tool=Vamb fa045c0 (J1); column F1 score (seq); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-2e9a50449c62668fb520; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Purity (bp); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Purity (bp); unit: fraction; direction: higher; result ids: acquired-result-94a9aa46f28b58e589e8; acquired-result-9d471a39a9508363d2b4; acquired-result-1b47683de6f006dab256; acquired-result-7cda84c0333baa15765b; acquired-result-a323ee4fee5830a1f5ea; acquired-result-ac5f753e199d4237a131; acquired-result-dc4f7fe5efe4d4938ad6; acquired-result-4925b4d225ea7f86280a; acquired-result-b8827050da429ecf9eeb; acquired-result-08965b4244e95a552687; acquired-result-5ae4ca4e8f168f8a0375; acquired-result-a6221db9c66eb986f3d8; acquired-result-ebb50ca396dd649d9675; acquired-result-6bb110fd7c168d9b1894; acquired-result-3c75fb08e47c35d4aa06; acquired-result-4e7727aa76f565344b07; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Purity (bp) through line 17; Tool=Vamb fa045c0 (J1); column Purity (bp); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-5d5051e0da1def0f8d24; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Purity (seq); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Purity (seq); unit: fraction; direction: higher; result ids: acquired-result-f3666a2634b7117757c5; acquired-result-551be7422d49481c71a9; acquired-result-1d77b698796eea320f8a; acquired-result-d9682f2d6319bf95e2a4; acquired-result-6cad0e74d48e4973cb41; acquired-result-d4ab464360195e4df806; acquired-result-dc4f699bdadbd803a3e0; acquired-result-91422249d258efbc0645; acquired-result-5705ce49de4cab09fccb; acquired-result-80beacb768e567fb0c15; acquired-result-cd43dee64544ad6a4f55; acquired-result-a24ca1184d6ee3cc7d74; acquired-result-0d53a111f5225827eee6; acquired-result-2212a44c304405278670; acquired-result-f4520b8c9d8d6f6d8ce0; acquired-result-37e891fbbac3637cdb70; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Purity (seq) through line 17; Tool=Vamb fa045c0 (J1); column Purity (seq); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-f4a4face3bce065dc318; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Percentage of binned bp; protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Percentage of binned bp; unit: fraction; direction: higher; result ids: acquired-result-ca25441f268c49cab921; acquired-result-458dab9c59678fd927d8; acquired-result-a4f73c36087d0354094c; acquired-result-402e97e324f0537ecf84; acquired-result-9d2af629a88bc94826bc; acquired-result-c515d02f0952193f6111; acquired-result-b27adc1887dd4b62835f; acquired-result-e1dead54d48859f02904; acquired-result-648811c41a0b2585b5da; acquired-result-17865a0f750dcdbde72f; acquired-result-04288c8378266d6ace66; acquired-result-588098f72468e47abb7d; acquired-result-49ce35a5bc67ca8af877; acquired-result-a624356321962b6c31d0; acquired-result-06ef00335d9733159335; acquired-result-aca1b6da78ac9095dbbf; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Percentage of binned bp through line 17; Tool=Vamb fa045c0 (J1); column Percentage of binned bp; context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-2a7374c2b7137bc06dd8; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Percentage of binned sequences; protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Percentage of binned sequences; unit: fraction; direction: higher; result ids: acquired-result-29aad20f9f9e632cb84f; acquired-result-fec4c66b969239049dae; acquired-result-7be592bafaf24cb2d7ae; acquired-result-d22e7b0912b777ee3210; acquired-result-58be1106d4f4ed3ef02a; acquired-result-cb7915c45557c3baacd9; acquired-result-b66fca01aa11885af057; acquired-result-f616e1fd5d45af758f90; acquired-result-45755cae2bc55c40d586; acquired-result-90259a69d3f05b689347; acquired-result-4311d16781c381a706db; acquired-result-1ce45335d553473a1fa4; acquired-result-2ae697a96f805ee67b60; acquired-result-385419ef9990808fd38c; acquired-result-db103627c7f2a3dfe356; acquired-result-65ccd43e9b4e46bd8377; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Percentage of binned sequences through line 17; Tool=Vamb fa045c0 (J1); column Percentage of binned sequences; context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19
- scope limitations
- Exact source-defined evaluation scope; reported scores are not rewire reproductions.
Related records
- part of: CAMI
- benchmark: MetaBinner 1.0 (B2) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- benchmark: MaxBin 2.0.2 (F2) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- benchmark: MetaWRAP 1.2.3 (D1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- benchmark: Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- benchmark: MetaBinner 1.0 (B3) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- benchmark: MetaBAT 0.25.4 (A3) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- benchmark: MetaBAT 2.13-33 (A1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- benchmark: CONCOCT 0.4.1 (G2) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- benchmark: MaxBin 2.2.7 (F1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- benchmark: UltraBinner 1.0 (E1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- benchmark: Vamb fa045c0 (J1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- benchmark: Autometa cami2-146383e (C1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- benchmark: CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- benchmark: Autometa cami2-146383e (C2) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- benchmark: MetaBAT 2.13-33 (A2) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- benchmark: MetaBinner 1.0 (B1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly
- subject: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded: benchmark membership