rewire.itbenchmarks
Protocol

CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly

Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.

16 evaluations · 256 results

Overview

Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.

Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.

Results

Each comparison retains its reviewed evaluation scope, dataset and metric. Results are shown without a pooled ranking.

CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Accuracy (bp)

Accuracy (bp) (fraction) · Higher values are better.

CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly · marmgCAMI2_short_read_pooled_gold_standard_assembly

Evidence origin: Independent external evaluation.

CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Accuracy (bp) through line 17; Tool=Vamb fa045c0 (J1); column Accuracy (bp)
  • Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.
Comparison details and limitations

Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.

  • Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.
  • Exact source-defined evaluation scope; reported scores are not rewire reproductions.

Automated source review: 2026-09-19. Numerical source review does not establish independent reproduction.

Dots show point estimates. Whiskers show only explicitly defined uncertainty (standard deviation, standard error or a labelled interval); their definitions remain in Table. Unresolved uncertainty is not plotted. Differences do not establish statistical significance.

Showing 12 of 16 matching rows.

Methods and evaluation design

Procedure, tasks and evaluated configurations

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Benchmarks

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Baseline coverage

Reference methods help show what a model adds beyond simple controls. We track a null control and a conventional method for each protocol.

0 of 2 active baseline roles have published Rewire measurements in this release. Measurements on a selected protocol do not establish coverage of an entire suite.

No execution recipe linked to this protocol. Recipe availability does not establish a completed evaluation.

No reviewed evaluations with results linked in this release.

Literature evidence is not a Rewire measurement. Executed but unpublished runs and private review status are not included.

Null control

Proposed control: requires review

Protocol-valid abundance or assignment control

Protocol-specific applicability, permitted inputs, access, split, evaluator and execution requirements need review before implementation or execution.

This is a suggested selection rule, not a validated method or a measured score.

Conventional reference

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Conventional reference-database method with pinned taxonomy/database

Protocol-specific applicability, permitted inputs, access, split, evaluator and execution requirements need review before implementation or execution.

This is a suggested selection rule, not a validated method or a measured score.

Protocol coverage CSV · Model evaluation matrix · Source table · Release and checksums

Coverage is derived from release 2026-09-29-06401fd5b220. Source citations describe the original records; they do not validate an unreviewed baseline proposal. No results have been generated by this audit.

Run instructions

No runnable recipe has been reviewed for this protocol. Dataset access, model requirements, licences and compute requirements must be checked against its sources before execution.

Strengths, limitations and unresolved questions

Evidence

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Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statementOriginal source and locationReview and provenance
Relationship: part of
discovery-benchmark-cami
Individual claims
CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca

Original source ↗

line 2; Tool=Gold standard; column Accuracy (bp)

Version: 501b543f65d62e5c1d6c3813be0badcac5e079ca
Retrieved: 2026-09-19

source checked

ai assisted source review · 2026-09-19

Audit details

Field: links:part_of:discovery-benchmark-cami

Claim: acquired-membership-b72d30b9f2e8f2cb48ab

Source artifact SHA-256: f08245658a243f36caedcfb1faebed1ca14dcc33a71f148981f634bc43e8f8a0

Hash scope: Exact downloaded bytes, before optional gzip storage

Inspected artifact

Sources and history

View linked audit checks and correction history

Release 2026-09-29-06401fd5b220 · Record review: discovered

1 source records and release historyDownload this release
Technical metadata and extraction receipts

Stable ID: acquired-protocol-f443b5fdaee9129f2b7a

source locator
line 2; Tool=Gold standard; column Accuracy (bp)
procedure
CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded
comparison panels
id: acquired-figure-0f344fb35e8f48d62e2c; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Accuracy (bp); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Accuracy (bp); unit: fraction; direction: higher; result ids: acquired-result-5daa9501d8f08de0db2d; acquired-result-ddd0d1cf4f5e388ffb15; acquired-result-156a469deeb8a3abd31e; acquired-result-8797b60869558d20d4df; acquired-result-5617c8c8c585b9805105; acquired-result-69794fafe321888f3276; acquired-result-baed571f338cdcb4ae43; acquired-result-af8dc1fa04df18136d2b; acquired-result-a77f940292ea560f1a14; acquired-result-b387154f84a823220fbe; acquired-result-5e559dc700efff1749fd; acquired-result-d6ce1f07e9c91b2d0319; acquired-result-81903eb35963478c6444; acquired-result-3798083edce4316bd7de; acquired-result-2bdadb67285fc81452a3; acquired-result-eb61b93754c8f37ec874; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Accuracy (bp) through line 17; Tool=Vamb fa045c0 (J1); column Accuracy (bp); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-22d0344ab306bd0c87bd; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Accuracy (seq); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Accuracy (seq); unit: fraction; direction: higher; result ids: acquired-result-8c5cb9081ffb93cd7608; acquired-result-7c9bc32206b8b127af70; acquired-result-c0d6ac6b345175f2ce23; acquired-result-f0248860d41459c2c5fa; acquired-result-b4063a7201781bb0be44; acquired-result-66e3377dc8cc1a627463; acquired-result-33f8df86051a8af162b8; acquired-result-72b3dd23d353e9b4c00c; acquired-result-fdd7b7a080ab1f26fc34; acquired-result-b98290a8fa685938fcab; acquired-result-fa7d7e8c59ab7bc6c5a6; acquired-result-fb97119978969054e191; acquired-result-475d1a204b4ee2b75184; acquired-result-cfb0d78e24efafdeab4b; acquired-result-c4dcfe1a47dfa1fad3e6; acquired-result-2ad60b3d27a9cb75c521; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Accuracy (seq) through line 17; Tool=Vamb fa045c0 (J1); column Accuracy (seq); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-3f44eb1d191b27fbe9d0; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Adjusted Rand index (bp); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Adjusted Rand index (bp); unit: dimensionless; direction: higher; result ids: acquired-result-36056d130d9cd6631440; acquired-result-7a0e25c03402709c5c8e; acquired-result-404b2dd6c773f6522caf; acquired-result-8c1898a1814c114bcabf; acquired-result-1b76983dba27d05e0c8a; acquired-result-da15aab29a2d99557ffb; acquired-result-1328ec376a2970299b8a; acquired-result-f1c7f8ccdf9ae848f82d; acquired-result-9c317ab9a8386c357ad0; acquired-result-b4cb268f4d116a9c61bf; acquired-result-01bb4053ce292cceddab; acquired-result-8abe3c0023f52b14ea12; acquired-result-4500bd066fb7ae4e6653; acquired-result-566bdd78ef77504daf52; acquired-result-f53eb3f135367bf757ca; acquired-result-ae1532cacb0f95722deb; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Adjusted Rand index (bp) through line 17; Tool=Vamb fa045c0 (J1); column Adjusted Rand index (bp); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-fc41a9ea6556cc6754fa; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Adjusted Rand index (seq); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Adjusted Rand index (seq); unit: dimensionless; direction: higher; result ids: acquired-result-ff2bda874b3b789cf416; acquired-result-f29516c0abc34d5a76cc; acquired-result-200622a2a44f28a0b922; acquired-result-00f809040c5bc5bfac65; acquired-result-08dcdf1f9bd6e59fbfd3; acquired-result-87a8ea971b97bd703ff0; acquired-result-9a1ddb5802c151a9741f; acquired-result-c44dc90e0875f657d80f; acquired-result-2795c346046cf37e21f9; acquired-result-7e92e378313cf7211875; acquired-result-216ae8b9df80b6cc672c; acquired-result-6ce6b7a5faee2c574142; acquired-result-d63bf8969644d213d13d; acquired-result-3b3b0735f60f2b016994; acquired-result-34719fde93e69f87c7ba; acquired-result-b0d8773745ddbfb45172; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Adjusted Rand index (seq) through line 17; Tool=Vamb fa045c0 (J1); column Adjusted Rand index (seq); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-0f96245d3f7fbb94ad1c; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Average completeness (bp); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Average completeness (bp); unit: fraction; direction: higher; result ids: acquired-result-1a1a5bf00484ff52b506; acquired-result-2e7f78fa71f921409c0b; acquired-result-d2813767cf68490c2b18; acquired-result-075e26f528bbae35e41f; acquired-result-00387aaf19bd34d662f5; acquired-result-23079d87167e90662eba; acquired-result-419cbec8980ed7fbac8f; acquired-result-79ba4b83308896126423; acquired-result-fe79b5c7d072507449a7; acquired-result-2633b5baa2f013cc791a; acquired-result-68f5d332d0d443944f80; acquired-result-23c972811e114255d1b4; acquired-result-4db456a7dd13ad1e43ab; acquired-result-61b6873af28a4d36acdb; acquired-result-dffdff31030c5f14ea3b; acquired-result-050c771e52ee824b5cd9; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Average completeness (bp) through line 17; Tool=Vamb fa045c0 (J1); column Average completeness (bp); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-e54a995cc70811981a52; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Average completeness (seq); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Average completeness (seq); unit: fraction; direction: higher; result ids: acquired-result-9e7080de6eda74c86f81; acquired-result-ca4b8efedabc471bd708; acquired-result-96c129bfd32247ec3f30; acquired-result-9cdbe35c3943ad051e7c; acquired-result-3f12dbc0fd910fbfdddb; acquired-result-4a774e104193f7f02235; acquired-result-a19b7bfa8bf9ab901b9a; acquired-result-1044f34ee53fce8671e8; acquired-result-ae90f9a3f81ff7d30120; acquired-result-d07ffa3fa32b0556534f; acquired-result-fae256b9f4cd77281e7c; acquired-result-ffa527f49018a2c337be; acquired-result-8ee864efd5f8465a2521; acquired-result-9cf3ea4778f977be49cd; acquired-result-ee31542412b5c699f123; acquired-result-b046026182f84f00c7ec; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Average completeness (seq) through line 17; Tool=Vamb fa045c0 (J1); column Average completeness (seq); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-90099e538e7d28f1730a; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Average purity (bp); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Average purity (bp); unit: fraction; direction: higher; result ids: acquired-result-a9b63fc430a854749ad0; acquired-result-aaad21d449875f3a0fe3; acquired-result-1e3077fd9361b65f9404; acquired-result-5e67ead8568e0ed45e98; acquired-result-6141eca4fda56f555bf8; acquired-result-a1343c39074eb1b87ed9; acquired-result-d7ee2544479033684c2c; acquired-result-7d11cea96168a96fed1c; acquired-result-27295f9b57bd36fb0f20; acquired-result-2c491b12ad7c90f71f82; acquired-result-58ff6d661803ce2f8807; acquired-result-32a694ecdb3102dfeb94; acquired-result-ebd218754f0b13a8b70b; acquired-result-84a44f1355351fa7a6c3; acquired-result-168ef575b5f71785a10f; acquired-result-d6c5e7a611138f461d36; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Average purity (bp) through line 17; Tool=Vamb fa045c0 (J1); column Average purity (bp); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-358e72d88ae829801594; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Average purity (seq); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Average purity (seq); unit: fraction; direction: higher; result ids: acquired-result-2d228753b978ca2066ba; acquired-result-721e900892d4638aeac0; acquired-result-f5afdbad322d46659d3c; acquired-result-5e6be8de491c396c34d5; acquired-result-464da0183a1cae2ec4e5; acquired-result-b28a32bdd3dc9f58d752; acquired-result-a0066a4926ddb9189813; acquired-result-8625c2a7b9e402a5137a; acquired-result-ef978261223802494182; acquired-result-4b06c117dd3d4c9dde40; acquired-result-5ee5060e850725cd1519; acquired-result-0ab38414b2984a43e51f; acquired-result-f5dc2abca85d14c9f7a2; acquired-result-c3bbe2d03da6440555c9; acquired-result-4018957f66bfb7c3606c; acquired-result-50da59a2224c347cdf42; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Average purity (seq) through line 17; Tool=Vamb fa045c0 (J1); column Average purity (seq); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-a8a081d8f2a4db908447; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Completeness (bp); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Completeness (bp); unit: fraction; direction: higher; result ids: acquired-result-8b0eee9fdd120a98c35a; acquired-result-2958adceff9c9536b6e1; acquired-result-3bf2e18fc09dccc41a55; acquired-result-4c95a9e1a8bee7caf19c; acquired-result-84007e97d7f5839e16d7; acquired-result-bc076b39334a1490f0dc; acquired-result-be304b6ada34859e81c8; acquired-result-ecf8857821da20506a60; acquired-result-875baf74aee532e1dec9; acquired-result-4e2b92435ae3fee40c18; acquired-result-46adb6dbe91f20897bcf; acquired-result-dfea1c195e403e52b3c2; acquired-result-0c512395730178a2f231; acquired-result-af8ab4208c6ee0912d79; acquired-result-20577a46406a1abfc448; acquired-result-897d3d167508e3062e65; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Completeness (bp) through line 17; Tool=Vamb fa045c0 (J1); column Completeness (bp); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-847eed561a9e09b37639; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Completeness (seq); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Completeness (seq); unit: fraction; direction: higher; result ids: acquired-result-f41d4d536b89151301f2; acquired-result-b380311525f53a2777c5; acquired-result-59049ddcd83c068efd59; acquired-result-4824206548634aa65452; acquired-result-16258237b153d634f73a; acquired-result-eb37a285075fea83551a; acquired-result-b596e1473ebe191a0d09; acquired-result-20c66fd48766ef64e710; acquired-result-c27dc040f482e9b9fbb5; acquired-result-9fa0c23e9fb54d6efa92; acquired-result-86c4cd4682c9e9cc8be3; acquired-result-6258642bb1d7d14fe4a5; acquired-result-70736eb162a93a9a1302; acquired-result-63ec2f8870f2edd5fb1b; acquired-result-5db168a86f7cf9e81327; acquired-result-c8d46d59078f98497584; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Completeness (seq) through line 17; Tool=Vamb fa045c0 (J1); column Completeness (seq); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-7d99a4765dd62dcc7df6; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: F1 score (bp); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: F1 score (bp); unit: fraction; direction: higher; result ids: acquired-result-6fee6fd69ec6211bcae7; acquired-result-03bac26a9e5c15ab7c1f; acquired-result-ff1a1245a96fa182a4a4; acquired-result-4532aa03e84cbea1c41b; acquired-result-53d8dfba4ec3b3706ea1; acquired-result-8b942ac96879ad5825b8; acquired-result-a5c27b37c449fbd550f8; acquired-result-99081a66e792a8d4d4a8; acquired-result-3d9649434ed5d681470a; acquired-result-1be3a6924ecd0c2560b8; acquired-result-20ec75e582e0d75c26f0; acquired-result-7feec973b155e8aef8ae; acquired-result-8baa96a2704d1325bd9b; acquired-result-74011b130f0a23237dc4; acquired-result-7fc7f22f4789853f85a5; acquired-result-a30aa3645ee3835d2cf3; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column F1 score (bp) through line 17; Tool=Vamb fa045c0 (J1); column F1 score (bp); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-8842f10d09ff776f7b2b; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: F1 score (seq); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: F1 score (seq); unit: fraction; direction: higher; result ids: acquired-result-737889abffd25a38179e; acquired-result-6ce55896619d3b47bf40; acquired-result-14dce89c88b2db15adf2; acquired-result-11f449ebe33e045759c4; acquired-result-6bd87f2805e7aaf3636e; acquired-result-f7ac4a4602754f945b10; acquired-result-a93ab9e49e41d5148c8e; acquired-result-1fa46707fd9bbe1000f5; acquired-result-3e1499e307dffbd80073; acquired-result-34c6d8715ed2449f32d8; acquired-result-648ce0d4dc4136314eb8; acquired-result-07a211aab595f82af5a3; acquired-result-0eec898e9358833fcb2c; acquired-result-421a02e85368cbc65b9e; acquired-result-4f7aced6ff205aeb3f94; acquired-result-5c5836f0cd01540826f1; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column F1 score (seq) through line 17; Tool=Vamb fa045c0 (J1); column F1 score (seq); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-2e9a50449c62668fb520; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Purity (bp); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Purity (bp); unit: fraction; direction: higher; result ids: acquired-result-94a9aa46f28b58e589e8; acquired-result-9d471a39a9508363d2b4; acquired-result-1b47683de6f006dab256; acquired-result-7cda84c0333baa15765b; acquired-result-a323ee4fee5830a1f5ea; acquired-result-ac5f753e199d4237a131; acquired-result-dc4f7fe5efe4d4938ad6; acquired-result-4925b4d225ea7f86280a; acquired-result-b8827050da429ecf9eeb; acquired-result-08965b4244e95a552687; acquired-result-5ae4ca4e8f168f8a0375; acquired-result-a6221db9c66eb986f3d8; acquired-result-ebb50ca396dd649d9675; acquired-result-6bb110fd7c168d9b1894; acquired-result-3c75fb08e47c35d4aa06; acquired-result-4e7727aa76f565344b07; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Purity (bp) through line 17; Tool=Vamb fa045c0 (J1); column Purity (bp); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-5d5051e0da1def0f8d24; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Purity (seq); protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Purity (seq); unit: fraction; direction: higher; result ids: acquired-result-f3666a2634b7117757c5; acquired-result-551be7422d49481c71a9; acquired-result-1d77b698796eea320f8a; acquired-result-d9682f2d6319bf95e2a4; acquired-result-6cad0e74d48e4973cb41; acquired-result-d4ab464360195e4df806; acquired-result-dc4f699bdadbd803a3e0; acquired-result-91422249d258efbc0645; acquired-result-5705ce49de4cab09fccb; acquired-result-80beacb768e567fb0c15; acquired-result-cd43dee64544ad6a4f55; acquired-result-a24ca1184d6ee3cc7d74; acquired-result-0d53a111f5225827eee6; acquired-result-2212a44c304405278670; acquired-result-f4520b8c9d8d6f6d8ce0; acquired-result-37e891fbbac3637cdb70; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Purity (seq) through line 17; Tool=Vamb fa045c0 (J1); column Purity (seq); context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-f4a4face3bce065dc318; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Percentage of binned bp; protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Percentage of binned bp; unit: fraction; direction: higher; result ids: acquired-result-ca25441f268c49cab921; acquired-result-458dab9c59678fd927d8; acquired-result-a4f73c36087d0354094c; acquired-result-402e97e324f0537ecf84; acquired-result-9d2af629a88bc94826bc; acquired-result-c515d02f0952193f6111; acquired-result-b27adc1887dd4b62835f; acquired-result-e1dead54d48859f02904; acquired-result-648811c41a0b2585b5da; acquired-result-17865a0f750dcdbde72f; acquired-result-04288c8378266d6ace66; acquired-result-588098f72468e47abb7d; acquired-result-49ce35a5bc67ca8af877; acquired-result-a624356321962b6c31d0; acquired-result-06ef00335d9733159335; acquired-result-aca1b6da78ac9095dbbf; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Percentage of binned bp through line 17; Tool=Vamb fa045c0 (J1); column Percentage of binned bp; context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19; id: acquired-figure-2a7374c2b7137bc06dd8; title: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly: Percentage of binned sequences; protocol id: acquired-protocol-f443b5fdaee9129f2b7a; dataset id: acquired-dataset-b3002a2c940171eead1a; metric: Percentage of binned sequences; unit: fraction; direction: higher; result ids: acquired-result-29aad20f9f9e632cb84f; acquired-result-fec4c66b969239049dae; acquired-result-7be592bafaf24cb2d7ae; acquired-result-d22e7b0912b777ee3210; acquired-result-58be1106d4f4ed3ef02a; acquired-result-cb7915c45557c3baacd9; acquired-result-b66fca01aa11885af057; acquired-result-f616e1fd5d45af758f90; acquired-result-45755cae2bc55c40d586; acquired-result-90259a69d3f05b689347; acquired-result-4311d16781c381a706db; acquired-result-1ce45335d553473a1fa4; acquired-result-2ae697a96f805ee67b60; acquired-result-385419ef9990808fd38c; acquired-result-db103627c7f2a3dfe356; acquired-result-65ccd43e9b4e46bd8377; source ids: acquired-source-f64302952624afe35a58; source locator: line 2; Tool=Gold standard; column Percentage of binned sequences through line 17; Tool=Vamb fa045c0 (J1); column Percentage of binned sequences; context: Complete selected source table is retained across source-order panels. These point estimates do not establish statistical significance or a universal ranking.; caveats: Source-specific evaluation. No equivalence to other releases, protocols or model families is inferred.; Exact source-defined evaluation scope; reported scores are not rewire reproductions.; Missing source cells and quarantined conflicts are recorded in acquisition and audit tables. Per-result scoring denominators may be unreported.; review: method: automated_source_review; date: 2026-09-19
scope limitations
Exact source-defined evaluation scope; reported scores are not rewire reproductions.
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