Method

Gold standard

Gold-standard reference output supplied by the assessment. This is an experimental reference, not a competing predictive model.

1 evaluation · 16 results

Overview

Gold-standard reference output supplied by the assessment. This is an experimental reference, not a competing predictive model.

Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.

Evaluations and results

1 evaluation · 16 results. Different protocols are not a single leaderboard.

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Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.

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Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

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Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

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Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
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Sources and history

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Release 2026-09-29-06401fd5b220 · Record review: discovered

1 source records and release history

CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · Original source · 501b543f65d62e5c1d6c3813be0badcac5e079ca

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Technical metadata and extraction receipts

Stable ID: acquired-configuration-c7901cd0e9a2eb889951

source locator: line 2; Tool=Gold standard; column Accuracy (bp)
reported configuration: Gold standard
reference kind: gold_standard_reference
missing metadata: checkpoint revision: unreported; model family: unextracted

Related records

model: Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly

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Tested configuration	Protocol and dataset	Finding	Evidence and details
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 Average completeness (bp) fraction · higher Uncertainty: kind: standard_error; printed value: 0.0; source column: Std error of av. completeness (bp) Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Average completeness (bp)
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 Percentage of binned sequences fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Percentage of binned sequences
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 Average purity (seq) fraction · higher Uncertainty: kind: standard_error; printed value: 0.0; source column: Std error of av. purity (seq) Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Average purity (seq)
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 Adjusted Rand index (bp) dimensionless · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Adjusted Rand index (bp)
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 Accuracy (bp) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Accuracy (bp)
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 F1 score (bp) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column F1 score (bp)
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 F1 score (seq) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column F1 score (seq)
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 Completeness (bp) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Completeness (bp)
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 Accuracy (seq) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Accuracy (seq)
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 Purity (bp) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Purity (bp)
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 Average completeness (seq) fraction · higher Uncertainty: kind: standard_error; printed value: 0.0; source column: Std error of av. completeness (seq) Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Average completeness (seq)
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 Average purity (bp) fraction · higher Uncertainty: kind: standard_error; printed value: 0.0; source column: Std error of av. purity (bp) Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Average purity (bp)
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 Percentage of binned bp fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Percentage of binned bp
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 Purity (seq) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Purity (seq)
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 Completeness (seq) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Completeness (seq)
Method: Gold standard	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	1 Adjusted Rand index (seq) dimensionless · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source Gold standard · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 2; Tool=Gold standard; column Adjusted Rand index (seq)