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CONCOCT 1.1.0 (G1)

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1 evaluation · 16 results

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1 evaluation · 16 results. Different protocols are not a single leaderboard.

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Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
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Release 2026-09-29-06401fd5b220 · Record review: discovered

1 source records and release history

CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · Original source · 501b543f65d62e5c1d6c3813be0badcac5e079ca

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Technical metadata and extraction receipts

Stable ID: acquired-configuration-ea760f01f9c7048be191

source locator: line 15; Tool=CONCOCT 1.1.0 (G1); column Accuracy (bp)
reported configuration: CONCOCT 1.1.0 (G1)
reference kind: not_a_reference
missing metadata: checkpoint revision: unreported; model family: unextracted

Related records

model: CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly

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Tested configuration	Protocol and dataset	Finding	Evidence and details
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.534 Purity (seq) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column Purity (seq)
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.432 Accuracy (bp) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column Accuracy (bp)
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.221 Percentage of binned sequences fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column Percentage of binned sequences
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.464 Adjusted Rand index (seq) dimensionless · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column Adjusted Rand index (seq)
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.573 F1 score (seq) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column F1 score (seq)
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.442 Adjusted Rand index (bp) dimensionless · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column Adjusted Rand index (bp)
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.685 Average completeness (bp) fraction · higher Uncertainty: kind: standard_error; printed value: 0.013066212754800228; source column: Std error of av. completeness (bp) Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column Average completeness (bp)
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.176 Completeness (seq) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column Completeness (seq)
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.537 Purity (bp) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column Purity (bp)
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.691 F1 score (bp) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column F1 score (bp)
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.697 Average purity (bp) fraction · higher Uncertainty: kind: standard_error; printed value: 0.01536937326481922; source column: Std error of av. purity (bp) Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column Average purity (bp)
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.551 Average completeness (seq) fraction · higher Uncertainty: kind: standard_error; printed value: 0.013441978810739181; source column: Std error of av. completeness (seq) Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column Average completeness (seq)
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.804 Percentage of binned bp fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column Percentage of binned bp
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.747 Completeness (bp) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column Completeness (bp)
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.597 Average purity (seq) fraction · higher Uncertainty: kind: standard_error; printed value: 0.019673842842816276; source column: Std error of av. purity (seq) Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column Average purity (seq)
Configuration: CONCOCT 1.1.0 (G1)	Protocol: CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly Dataset subset: marmgCAMI2_short_read_pooled_gold_standard_assembly	0.118 Accuracy (seq) fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Independent external evaluation · Source checked Methods, coverage and source CONCOCT 1.1.0 (G1) · CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded · marmgCAMI2_short_read_pooled_gold_standard_assembly CAMI II marine genome binning; pooled short-read gold-standard assembly; circular elements excluded Aggregation: source aggregate over pooled assembly, not sample averaging CAMI: 501b543f65d62e5c1d6c3813be0badcac5e079ca · line 15; Tool=CONCOCT 1.1.0 (G1); column Accuracy (seq)