| Configuration: 3mer_random_forest | Protocol: FramePool study MRL: Random 25-100nt Dataset subset: Sample MPRA Random 25-100nt | 0.616 pearson_r correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source3mer_random_forest random-25-100nt Not reported Aggregation: Not reported FramePool 2021 primary article; FramePool Supplementary Table S4 · S4 Table cell C2; row 3mer_random_forest; S7–S8 MPRA correlation plots |
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| Configuration: 4mer_random_forest | Protocol: FramePool study MRL: Random 25-100nt Dataset subset: Sample MPRA Random 25-100nt | 0.647 pearson_r correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source4mer_random_forest random-25-100nt Not reported Aggregation: Not reported FramePool 2021 primary article; FramePool Supplementary Table S4 · S4 Table cell C3; row 4mer_random_forest; S7–S8 MPRA correlation plots |
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| Configuration: 5mer_frame_forest | Protocol: FramePool study MRL: Random 25-100nt Dataset subset: Sample MPRA Random 25-100nt | 0.73 pearson_r correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and source5mer_frame_forest random-25-100nt Not reported Aggregation: Not reported FramePool 2021 primary article; FramePool Supplementary Table S4 · S4 Table cell C6; row 5mer_frame_forest; S7–S8 MPRA correlation plots |
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| Configuration: frame_forest (4mer) | Protocol: FramePool study MRL: Random 25-100nt Dataset subset: Sample MPRA Random 25-100nt | 0.772 pearson_r correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceframe_forest (4mer) random-25-100nt Not reported Aggregation: Not reported FramePool 2021 primary article; FramePool Supplementary Table S4 · S4 Table cell C4; row frame_forest (4mer); S7–S8 MPRA correlation plots |
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| Configuration: frame_forest_hyperopt | Protocol: FramePool study MRL: Random 25-100nt Dataset subset: Sample MPRA Random 25-100nt | 0.778 pearson_r correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceframe_forest_hyperopt random-25-100nt Not reported Aggregation: Not reported FramePool 2021 primary article; FramePool Supplementary Table S4 · S4 Table cell C5; row frame_forest_hyperopt; S7–S8 MPRA correlation plots |
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| Configuration: FramePool 100 | Protocol: FramePool study MRL: Random 25-100nt Dataset subset: Sample MPRA Random 25-100nt | 0.903 pearson_r correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceFramePool 100 Random 25-100nt Not reported Aggregation: Not reported FramePool 2021 primary article; FramePool Supplementary Table S1 · S1 Table cell E3; row Random 25-100nt, column FramePool 100; main text Evaluating frame pooling on MPRA data identifies Pearson correlation |
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| Configuration: FramePool 50 | Protocol: FramePool study MRL: Random 25-100nt Dataset subset: Sample MPRA Random 25-100nt | 0.901 pearson_r correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceFramePool 50 Random 25-100nt Not reported Aggregation: Not reported FramePool 2021 primary article; FramePool Supplementary Table S1 · S1 Table cell C3; row Random 25-100nt, column FramePool 50; main text Evaluating frame pooling on MPRA data identifies Pearson correlation |
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| Configuration: FramePool Combined | Protocol: FramePool study MRL: Random 25-100nt Dataset subset: Sample MPRA Random 25-100nt | 0.914 pearson_r correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceFramePool Combined Random 25-100nt Not reported Aggregation: Not reported FramePool 2021 primary article; FramePool Supplementary Table S1 · S1 Table cell F3; row Random 25-100nt, column FramePool Combined; main text Evaluating frame pooling on MPRA data identifies Pearson correlation |
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| Configuration: Optimus 100 | Protocol: FramePool study MRL: Random 25-100nt Dataset subset: Sample MPRA Random 25-100nt | 0.915 pearson_r correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceOptimus 100 Random 25-100nt Not reported Aggregation: Not reported FramePool 2021 primary article; FramePool Supplementary Table S1 · S1 Table cell D3; row Random 25-100nt, column Optimus 100; main text Evaluating frame pooling on MPRA data identifies Pearson correlation |
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| Configuration: Optimus 50 | Protocol: FramePool study MRL: Random 25-100nt Dataset subset: Sample MPRA Random 25-100nt | 0.743 pearson_r correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceOptimus 50 Random 25-100nt Not reported Aggregation: Not reported FramePool 2021 primary article; FramePool Supplementary Table S1 · S1 Table cell B3; row Random 25-100nt, column Optimus 50; main text Evaluating frame pooling on MPRA data identifies Pearson correlation |
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