The split of NABench ribozyme assays that NABench evaluated on. The upstream dataset release is not catalogued here, so no claim is made that this matches its original splits.
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130 evaluations · 130 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: AIDO.RNA | Task: NABench CCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, contiguous cross validation Dataset subset: NABench ribozyme assays (NABench split) | 0.219 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceScored supervised, contiguous cross validation across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 11, row(AIDO.RNA), column(ribozyme) |
| Configuration: AIDO.RNA | Task: NABench FS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, few-shot Dataset subset: NABench ribozyme assays (NABench split) | 0.201 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAIDO.RNA on NABench FS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, few-shot Scored few-shot across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 9, row(AIDO.RNA), column(ribozyme) |
| Configuration: AIDO.RNA | Task: NABench RCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, random cross validation Dataset subset: NABench ribozyme assays (NABench split) | 0.495 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceScored supervised, random cross validation across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 10, row(AIDO.RNA), column(ribozyme) |
| Configuration: AIDO.RNA | Task: NABench ZS-AUC-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Dataset subset: NABench ribozyme assays (NABench split) | 0.554 auc fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAIDO.RNA on NABench ZS-AUC-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Scored zero-shot across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 8, row(AIDO.RNA), column(ribozyme) |
| Configuration: AIDO.RNA | Task: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Dataset subset: NABench ribozyme assays (NABench split) | 0.109 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAIDO.RNA on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Scored zero-shot across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(AIDO.RNA), column(ribozyme) |
| Configuration: BiRNA-BERT | Task: NABench CCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, contiguous cross validation Dataset subset: NABench ribozyme assays (NABench split) | 0.193 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceScored supervised, contiguous cross validation across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 11, row(BiRNA-BERT), column(ribozyme) |
| Configuration: BiRNA-BERT | Task: NABench FS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, few-shot Dataset subset: NABench ribozyme assays (NABench split) | 0.175 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceBiRNA-BERT on NABench FS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, few-shot Scored few-shot across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 9, row(BiRNA-BERT), column(ribozyme) |
| Configuration: BiRNA-BERT | Task: NABench RCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, random cross validation Dataset subset: NABench ribozyme assays (NABench split) | 0.488 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceScored supervised, random cross validation across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 10, row(BiRNA-BERT), column(ribozyme) |
| Configuration: BiRNA-BERT | Task: NABench ZS-AUC-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Dataset subset: NABench ribozyme assays (NABench split) | 0.556 auc fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceBiRNA-BERT on NABench ZS-AUC-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Scored zero-shot across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 8, row(BiRNA-BERT), column(ribozyme) |
| Configuration: BiRNA-BERT | Task: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Dataset subset: NABench ribozyme assays (NABench split) | 0.102 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceBiRNA-BERT on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Scored zero-shot across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(BiRNA-BERT), column(ribozyme) |
| Configuration: Crafts | Task: NABench CCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, contiguous cross validation Dataset subset: NABench ribozyme assays (NABench split) | 0.245 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceScored supervised, contiguous cross validation across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 11, row(Crafts), column(ribozyme) |
| Configuration: Crafts | Task: NABench FS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, few-shot Dataset subset: NABench ribozyme assays (NABench split) | 0.129 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCrafts on NABench FS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, few-shot Scored few-shot across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 9, row(Crafts), column(ribozyme) |
| Configuration: Crafts | Task: NABench RCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, random cross validation Dataset subset: NABench ribozyme assays (NABench split) | 0.541 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceScored supervised, random cross validation across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 10, row(Crafts), column(ribozyme) |
| Configuration: Crafts | Task: NABench ZS-AUC-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Dataset subset: NABench ribozyme assays (NABench split) | 0.57 auc fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCrafts on NABench ZS-AUC-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Scored zero-shot across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 8, row(Crafts), column(ribozyme) |
| Configuration: Crafts | Task: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Dataset subset: NABench ribozyme assays (NABench split) | 0.132 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCrafts on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Scored zero-shot across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Crafts), column(ribozyme) |
| Configuration: Dnabert_6 | Task: NABench CCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, contiguous cross validation Dataset subset: NABench ribozyme assays (NABench split) | 0.22 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceScored supervised, contiguous cross validation across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 11, row(Dnabert_6), column(ribozyme) |
| Configuration: Dnabert_6 | Task: NABench FS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, few-shot Dataset subset: NABench ribozyme assays (NABench split) | 0.088 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceDnabert_6 on NABench FS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, few-shot Scored few-shot across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 9, row(Dnabert_6), column(ribozyme) |
| Configuration: Dnabert_6 | Task: NABench RCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, random cross validation Dataset subset: NABench ribozyme assays (NABench split) | 0.302 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceScored supervised, random cross validation across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 10, row(Dnabert_6), column(ribozyme) |
| Configuration: Dnabert_6 | Task: NABench ZS-AUC-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Dataset subset: NABench ribozyme assays (NABench split) | 0.535 auc fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceDnabert_6 on NABench ZS-AUC-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Scored zero-shot across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 8, row(Dnabert_6), column(ribozyme) |
| Configuration: Dnabert_6 | Task: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Dataset subset: NABench ribozyme assays (NABench split) | 0.061 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceDnabert_6 on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Scored zero-shot across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Dnabert_6), column(ribozyme) |
| Configuration: Dnabert | Task: NABench CCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, contiguous cross validation Dataset subset: NABench ribozyme assays (NABench split) | 0.213 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceScored supervised, contiguous cross validation across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 11, row(Dnabert), column(ribozyme) |
| Configuration: Dnabert | Task: NABench FS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, few-shot Dataset subset: NABench ribozyme assays (NABench split) | 0.15 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceDnabert on NABench FS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, few-shot Scored few-shot across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 9, row(Dnabert), column(ribozyme) |
| Configuration: Dnabert | Task: NABench RCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, random cross validation Dataset subset: NABench ribozyme assays (NABench split) | 0.46 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceScored supervised, random cross validation across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 10, row(Dnabert), column(ribozyme) |
| Configuration: Dnabert | Task: NABench ZS-AUC-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Dataset subset: NABench ribozyme assays (NABench split) | 0.525 auc fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceDnabert on NABench ZS-AUC-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Scored zero-shot across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 8, row(Dnabert), column(ribozyme) |
| Configuration: Dnabert | Task: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Dataset subset: NABench ribozyme assays (NABench split) | 0.049 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceDnabert on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Scored zero-shot across the NABench ribozyme assays. Aggregation: Not reported NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Dnabert), column(ribozyme) |
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| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| description The split of NABench ribozyme assays that NABench evaluated on. The upstream dataset release is not catalogued here, so no claim is made that this matches its original splits. Context-only references | NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction No field-specific location recorded Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| name NABench ribozyme assays (NABench split) Context-only references | NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction No field-specific location recorded Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
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Release 2026-09-29-06401fd5b220 · Record review: source checked
Stable ID: nabench-dataset-nabench-ribozyme-assays