GenBench dataset Mouse Enhancers: binary classification, sequence length 500.
7 evaluations · 7 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: Caduceus (GenBench) | Protocol: GenBench Mouse Enhancers Dataset: GenBench Mouse Enhancers | 0.816 Accuracy (task-level value as printed in Table 4) fraction · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceCaduceus on GenBench Mouse Enhancers lit-genomics-20261011-genbench-protocol-short-mouse-enhancers Aggregation: Not reported GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models · Table 4, row 'Mouse Enhancers', column 'Caduceus' |
| Configuration: CNN (GenBench) | Protocol: GenBench Mouse Enhancers Dataset: GenBench Mouse Enhancers | 0.701 Accuracy (task-level value as printed in Table 4) fraction · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceCNN on GenBench Mouse Enhancers lit-genomics-20261011-genbench-protocol-short-mouse-enhancers Aggregation: Not reported GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models · Table 4, row 'Mouse Enhancers', column 'CNN' |
| Configuration: DNABERT (GenBench) | Protocol: GenBench Mouse Enhancers Dataset: GenBench Mouse Enhancers | 0.81 Accuracy (task-level value as printed in Table 4) fraction · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceDNABERT on GenBench Mouse Enhancers lit-genomics-20261011-genbench-protocol-short-mouse-enhancers Aggregation: Not reported GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models · Table 4, row 'Mouse Enhancers', column 'DNABERT' |
| Configuration: DNABERT2 (GenBench) | Protocol: GenBench Mouse Enhancers Dataset: GenBench Mouse Enhancers | 0.818 Accuracy (task-level value as printed in Table 4) fraction · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceDNABERT2 on GenBench Mouse Enhancers lit-genomics-20261011-genbench-protocol-short-mouse-enhancers Aggregation: Not reported GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models · Table 4, row 'Mouse Enhancers', column 'DNABERT2' |
| Configuration: GENA-LM (GenBench) | Protocol: GenBench Mouse Enhancers Dataset: GenBench Mouse Enhancers | 0.83 Accuracy (task-level value as printed in Table 4) fraction · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceGENA-LM on GenBench Mouse Enhancers lit-genomics-20261011-genbench-protocol-short-mouse-enhancers Aggregation: Not reported GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models · Table 4, row 'Mouse Enhancers', column 'GENA-LM' |
| Configuration: HyenaDNA (GenBench) | Protocol: GenBench Mouse Enhancers Dataset: GenBench Mouse Enhancers | 0.793 Accuracy (task-level value as printed in Table 4) fraction · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceHyenaDNA on GenBench Mouse Enhancers lit-genomics-20261011-genbench-protocol-short-mouse-enhancers Aggregation: Not reported GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models · Table 4, row 'Mouse Enhancers', column 'HyenaDNA' |
| Configuration: NT (GenBench) | Protocol: GenBench Mouse Enhancers Dataset: GenBench Mouse Enhancers | 0.851 Accuracy (task-level value as printed in Table 4) fraction · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceNT on GenBench Mouse Enhancers lit-genomics-20261011-genbench-protocol-short-mouse-enhancers Aggregation: Not reported GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models · Table 4, row 'Mouse Enhancers', column 'NT' |
Source checking is not independent reproduction. Release 2026-10-22-1b7cf027e4f6.
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6 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Population Table 2 row 'Mouse Enhancers': Binary classification; training size 968, testing size 242, length 500 (as printed; task-level sizes) Context-only references | GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models Table 2, row 'Mouse Enhancers' Version: arXiv 2406.01627 version 2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Source location Table 2, row 'Mouse Enhancers' Context-only references | GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models Table 2, row 'Mouse Enhancers' Version: arXiv 2406.01627 version 2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Split GenBench train and test split (Table 2) Context-only references | GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models Table 2, row 'Mouse Enhancers' Version: arXiv 2406.01627 version 2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Description GenBench dataset Mouse Enhancers: binary classification, sequence length 500. Context-only references | GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models Table 2, row 'Mouse Enhancers' Version: arXiv 2406.01627 version 2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Relationship: same data as reported-dataset-f0bf60a62ad7c3 Context-only references | GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models Table 2, row 'Mouse Enhancers' Version: arXiv 2406.01627 version 2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Name GenBench Mouse Enhancers Context-only references | GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models Table 2, row 'Mouse Enhancers' Version: arXiv 2406.01627 version 2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Release 2026-10-22-1b7cf027e4f6 · Record review: source checked
Stable ID: lit-genomics-20261011-genbench-data-short-mouse-enhancers