Configuration

Chai-1 — FoldBench published inference

5 seeds × 5 samples, 10 recycles; highest model ranking score. Paper-specific input/code adjustments; H800 80GB inference.

9 evaluations · 35 results

Overview

5 seeds × 5 samples, 10 recycles; highest model ranking score. Paper-specific input/code adjustments; H800 80GB inference.

Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.

Evaluations and results

9 evaluations · 35 results. Different protocols are not a single leaderboard.

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Tested model or methodProtocolDatasetEvaluation setupMetricEvidence origin

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configuration	Protocol and dataset	Finding	Evidence and details
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench antibody-antigen published full-set assessment Dataset: FoldBench antibody-antigen published targets	10.5 irmsd angstrom · lower Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench antibody antigen chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, antibody-antigen block, iRMSD row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench antibody-antigen published full-set assessment Dataset: FoldBench antibody-antigen published targets	0.85 lddt fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench antibody antigen chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, antibody-antigen block, LDDT row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench antibody-antigen published full-set assessment Dataset: FoldBench antibody-antigen published targets	33.4 lrmsd angstrom · lower Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench antibody antigen chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, antibody-antigen block, lRMSD row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench antibody-antigen published full-set assessment Dataset: FoldBench antibody-antigen published targets	23.6% success-rate percent · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench antibody antigen chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, antibody-antigen block, Success rate row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench dna-monomer published full-set assessment Dataset: FoldBench dna-monomer published targets	0.48 gdt-ts fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench dna monomer chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, dna-monomer block, GDT-TS row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench dna-monomer published full-set assessment Dataset: FoldBench dna-monomer published targets	0.46 lddt fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench dna monomer chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, dna-monomer block, LDDT row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench dna-monomer published full-set assessment Dataset: FoldBench dna-monomer published targets	8.57 rmsd angstrom · lower Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench dna monomer chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, dna-monomer block, RMSD row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench dna-monomer published full-set assessment Dataset: FoldBench dna-monomer published targets	0.22 tm-score fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench dna monomer chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, dna-monomer block, TM-score row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-dna published full-set assessment Dataset: FoldBench protein-dna published targets	5.2 irmsd angstrom · lower Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein dna chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-dna block, iRMSD row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-dna published full-set assessment Dataset: FoldBench protein-dna published targets	0.81 lddt fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein dna chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-dna block, LDDT row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-dna published full-set assessment Dataset: FoldBench protein-dna published targets	11.7 lrmsd angstrom · lower Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein dna chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-dna block, lRMSD row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-dna published full-set assessment Dataset: FoldBench protein-dna published targets	70% success-rate percent · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein dna chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-dna block, Success rate row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-ligand published full-set assessment Dataset: FoldBench protein-ligand published targets	0.89 lddt-lp fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein ligand chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-ligand block, LDDT-LP row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-ligand published full-set assessment Dataset: FoldBench protein-ligand published targets	0.7 lddt-pli fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein ligand chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-ligand block, LDDT-PLI row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-ligand published full-set assessment Dataset: FoldBench protein-ligand published targets	51.2% success-rate percent · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein ligand chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-ligand block, Success rate row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-monomer published full-set assessment Dataset: FoldBench protein-monomer published targets	0.9 gdt-ts fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein monomer chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-monomer block, GDT-TS row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-monomer published full-set assessment Dataset: FoldBench protein-monomer published targets	0.87 lddt fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein monomer chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-monomer block, LDDT row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-monomer published full-set assessment Dataset: FoldBench protein-monomer published targets	2.1 rmsd angstrom · lower Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein monomer chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-monomer block, RMSD row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-monomer published full-set assessment Dataset: FoldBench protein-monomer published targets	0.93 tm-score fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein monomer chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-monomer block, TM-score row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-peptide published full-set assessment Dataset: FoldBench protein-peptide published targets	3.36 irmsd angstrom · lower Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein peptide chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-peptide block, iRMSD row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-peptide published full-set assessment Dataset: FoldBench protein-peptide published targets	0.82 lddt fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein peptide chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-peptide block, LDDT row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-peptide published full-set assessment Dataset: FoldBench protein-peptide published targets	8.77 lrmsd angstrom · lower Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein peptide chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-peptide block, lRMSD row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-peptide published full-set assessment Dataset: FoldBench protein-peptide published targets	66.7% success-rate percent · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein peptide chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-peptide block, Success rate row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-protein published full-set assessment Dataset: FoldBench protein-protein published targets	6.68 irmsd angstrom · lower Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein protein chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-protein block, iRMSD row, Chai-1 column; Table 1 assessable count
Configuration: Chai-1 — FoldBench published inference	Protocol: FoldBench protein-protein published full-set assessment Dataset: FoldBench protein-protein published targets	0.8 lddt fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible	Author-reported evaluation · Source checked Methods, coverage and source foldbench protein protein chai1 Not reported Aggregation: source table mean FoldBench supplementary target coverage and performance · Supplementary Table 3, protein-protein block, LDDT row, Chai-1 column; Table 1 assessable count

Source checking is not independent reproduction. Release 2026-09-30-e37e3ab1284d.

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Sources and history

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Release 2026-09-30-e37e3ab1284d · Record review: source checked

2 source records and release history

Benchmarking all-atom biomolecular structure prediction with FoldBench · Original source · 10.1038/s41467-025-67127-3
FoldBench supplementary target coverage and performance · Original source · Supplementary Information to 10.1038/s41467-025-67127-3

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Technical metadata and extraction receipts

Stable ID: ucc-research-config-foldbench-chai1

review: method: automated_source_review; actor: Codex research coverage worker; reviewed at: 2026-09-30T21:43:56Z; note: Primary-source table transcription and scope review; no independent reproduction or human scientific review.
code commit: 6ac5705aa7d623a9694c65ec2604b6ec3118f872
samples: 25
recycles: 10
selection: highest model ranking score
missing metadata: weights sha256: not extracted

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