rewirebio.iobenchmarks
Configuration

Evo_1.5_8k_base

Evo_1.5_8k_base: Nucleotide foundation model.

43 evaluations · 43 results

Overview

An explanatory profile has not yet been reviewed for this record.

Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.

Evaluations and results

43 evaluations · 43 results. Different protocols are not a single leaderboard.

Sorted by Spearman (higher is better). The best value in each column is highlighted. Decimals are rounded for display; each value links to the printed value and its source.

Tested configurationProtocol and datasetSpearmanAUROCMCCNDCG (cutoff not stated)
Evo_1.5_8k_baseEvaluationNABench SELEX-RCV: Overall fitness prediction on NABench SELEX assays, Random cross validation Spearman ρ, NABench SELEX assays (NABench split)0.635 (best in column)Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench SELEX-FS: Overall fitness prediction on NABench SELEX assays, Few-shot Spearman ρ, NABench SELEX assays (NABench split)0.568Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench RCV-CORR-TRNA: Fitness prediction on tRNA assays, supervised, random cross validation, NABench tRNA assays (NABench split)0.494Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench RCV-CORR-MRNA: Fitness prediction on mRNA assays, supervised, random cross validation, NABench mRNA assays (NABench split)0.491Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench RCV-CORR-PROMOTER: Fitness prediction on promoter assays, supervised, random cross validation, NABench promoter assays (NABench split)0.443Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench RCV-CORR-APTAMER: Fitness prediction on aptamer assays, supervised, random cross validation, NABench aptamer assays (NABench split)0.419Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench DMS-RCV: Overall fitness prediction on NABench deep mutational scanning assays, Random cross validation Spearman ρ, NABench deep mutational scanning assays (NABench split)0.417Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench RCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, random cross validation, NABench ribozyme assays (NABench split)0.412Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench ZS-CORR-TRNA: Fitness prediction on tRNA assays, zero-shot, NABench tRNA assays (NABench split)0.404Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench FS-CORR-MRNA: Fitness prediction on mRNA assays, few-shot, NABench mRNA assays (NABench split)0.294Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench CCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, contiguous cross validation, NABench ribozyme assays (NABench split)0.264Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench CCV-CORR-MRNA: Fitness prediction on mRNA assays, supervised, contiguous cross validation, NABench mRNA assays (NABench split)0.227Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench CCV-CORR-TRNA: Fitness prediction on tRNA assays, supervised, contiguous cross validation, NABench tRNA assays (NABench split)0.222Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench FS-CORR-APTAMER: Fitness prediction on aptamer assays, few-shot, NABench aptamer assays (NABench split)0.217Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench DMS-CCV: Overall fitness prediction on NABench deep mutational scanning assays, Contiguous cross validation Spearman ρ, NABench deep mutational scanning assays (NABench split)0.216Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench ZS-CORR-APTAMER: Fitness prediction on aptamer assays, zero-shot, NABench aptamer assays (NABench split)0.18Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench ZS-CORR-PROMOTER: Fitness prediction on promoter assays, zero-shot, NABench promoter assays (NABench split)0.178Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench DMS-ZS-CORR: Overall fitness prediction on NABench deep mutational scanning assays, Zero-shot Spearman ρ, NABench deep mutational scanning assays (NABench split)0.177Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench RCV-CORR-ENHANCER: Fitness prediction on enhancer assays, supervised, random cross validation, NABench enhancer assays (NABench split)0.169Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench FS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, few-shot, NABench ribozyme assays (NABench split)0.153Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench DMS-FS: Overall fitness prediction on NABench deep mutational scanning assays, Few-shot Spearman ρ, NABench deep mutational scanning assays (NABench split)0.147Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench ZS-CORR-MRNA: Fitness prediction on mRNA assays, zero-shot, NABench mRNA assays (NABench split)0.143Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot, NABench ribozyme assays (NABench split)0.139Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench SELEX-ZS-CORR: Overall fitness prediction on NABench SELEX assays, Zero-shot Spearman ρ, NABench SELEX assays (NABench split)0.136Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench FS-CORR-TRNA: Fitness prediction on tRNA assays, few-shot, NABench tRNA assays (NABench split)0.11Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench CCV-CORR-APTAMER: Fitness prediction on aptamer assays, supervised, contiguous cross validation, NABench aptamer assays (NABench split)0.077Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench FS-CORR-PROMOTER: Fitness prediction on promoter assays, few-shot, NABench promoter assays (NABench split)0.052Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench CCV-CORR-ENHANCER: Fitness prediction on enhancer assays, supervised, contiguous cross validation, NABench enhancer assays (NABench split)0.047Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench FS-CORR-ENHANCER: Fitness prediction on enhancer assays, few-shot, NABench enhancer assays (NABench split)0.039Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench CCV-CORR-PROMOTER: Fitness prediction on promoter assays, supervised, contiguous cross validation, NABench promoter assays (NABench split)0.037Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench ZS-CORR-ENHANCER: Fitness prediction on enhancer assays, zero-shot, NABench enhancer assays (NABench split)0.034Not reportedNot reportedNot reported
Evo_1.5_8k_baseEvaluationNABench DMS-ZS-AUC: Overall fitness prediction on NABench deep mutational scanning assays, Zero-shot AUC, NABench deep mutational scanning assays (NABench split)Not reported0.543Not reportedNot reported
Evo_1.5_8k_baseEvaluationNABench DMS-ZS-MCC: Overall fitness prediction on NABench deep mutational scanning assays, Zero-shot MCC, NABench deep mutational scanning assays (NABench split)Not reportedNot reported0.085 (best in column)Not reported
Evo_1.5_8k_baseEvaluationNABench DMS-ZS-NDCG: Overall fitness prediction on NABench deep mutational scanning assays, Zero-shot NDCG, NABench deep mutational scanning assays (NABench split)Not reportedNot reportedNot reported0.396 (best in column)
Evo_1.5_8k_baseEvaluationNABench SELEX-ZS-AUC: Overall fitness prediction on NABench SELEX assays, Zero-shot AUC, NABench SELEX assays (NABench split)Not reported0.572Not reportedNot reported
Evo_1.5_8k_baseEvaluationNABench SELEX-ZS-MCC: Overall fitness prediction on NABench SELEX assays, Zero-shot MCC, NABench SELEX assays (NABench split)Not reportedNot reported0.065Not reported
Evo_1.5_8k_baseEvaluationNABench SELEX-ZS-NDCG: Overall fitness prediction on NABench SELEX assays, Zero-shot NDCG, NABench SELEX assays (NABench split)Not reportedNot reportedNot reported0.324
Evo_1.5_8k_baseEvaluationNABench ZS-AUC-APTAMER: Fitness prediction on aptamer assays, zero-shot, NABench aptamer assays (NABench split)Not reported0.578Not reportedNot reported
Evo_1.5_8k_baseEvaluationNABench ZS-AUC-ENHANCER: Fitness prediction on enhancer assays, zero-shot, NABench enhancer assays (NABench split)Not reported0.526Not reportedNot reported
Evo_1.5_8k_baseEvaluationNABench ZS-AUC-MRNA: Fitness prediction on mRNA assays, zero-shot, NABench mRNA assays (NABench split)Not reported0.618Not reportedNot reported
Evo_1.5_8k_baseEvaluationNABench ZS-AUC-PROMOTER: Fitness prediction on promoter assays, zero-shot, NABench promoter assays (NABench split)Not reported0.604Not reportedNot reported
Evo_1.5_8k_baseEvaluationNABench ZS-AUC-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot, NABench ribozyme assays (NABench split)Not reported0.569Not reportedNot reported
Evo_1.5_8k_baseEvaluationNABench ZS-AUC-TRNA: Fitness prediction on tRNA assays, zero-shot, NABench tRNA assays (NABench split)Not reported0.718 (best in column)Not reportedNot reported
All 43 result rows with coverage, uncertainty and sources
Filter evaluations

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configurationProtocol and datasetFindingEvidence and details
Configuration: Evo_1.5_8k_baseTask: NABench CCV-CORR-APTAMER: Fitness prediction on aptamer assays, supervised, contiguous cross validation
Dataset subset: NABench aptamer assays (NABench split)
0.077 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench CCV-CORR-APTAMER: Fitness prediction on aptamer assays, supervised, contiguous cross validation

Scored supervised, contiguous cross validation across the NABench aptamer assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 11, row(Evo_1.5_8k_base), column(aptamer)
Configuration: Evo_1.5_8k_baseTask: NABench CCV-CORR-ENHANCER: Fitness prediction on enhancer assays, supervised, contiguous cross validation
Dataset subset: NABench enhancer assays (NABench split)
0.047 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench CCV-CORR-ENHANCER: Fitness prediction on enhancer assays, supervised, contiguous cross validation

Scored supervised, contiguous cross validation across the NABench enhancer assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 11, row(Evo_1.5_8k_base), column(enhancer)
Configuration: Evo_1.5_8k_baseTask: NABench CCV-CORR-MRNA: Fitness prediction on mRNA assays, supervised, contiguous cross validation
Dataset subset: NABench mRNA assays (NABench split)
0.227 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench CCV-CORR-MRNA: Fitness prediction on mRNA assays, supervised, contiguous cross validation

Scored supervised, contiguous cross validation across the NABench mRNA assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 11, row(Evo_1.5_8k_base), column(mRNA)
Configuration: Evo_1.5_8k_baseTask: NABench CCV-CORR-PROMOTER: Fitness prediction on promoter assays, supervised, contiguous cross validation
Dataset subset: NABench promoter assays (NABench split)
0.037 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench CCV-CORR-PROMOTER: Fitness prediction on promoter assays, supervised, contiguous cross validation

Scored supervised, contiguous cross validation across the NABench promoter assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 11, row(Evo_1.5_8k_base), column(promoter)
Configuration: Evo_1.5_8k_baseTask: NABench CCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, contiguous cross validation
Dataset subset: NABench ribozyme assays (NABench split)
0.264 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench CCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, contiguous cross validation

Scored supervised, contiguous cross validation across the NABench ribozyme assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 11, row(Evo_1.5_8k_base), column(ribozyme)
Configuration: Evo_1.5_8k_baseTask: NABench CCV-CORR-TRNA: Fitness prediction on tRNA assays, supervised, contiguous cross validation
Dataset subset: NABench tRNA assays (NABench split)
0.222 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench CCV-CORR-TRNA: Fitness prediction on tRNA assays, supervised, contiguous cross validation

Scored supervised, contiguous cross validation across the NABench tRNA assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 11, row(Evo_1.5_8k_base), column(tRNA)
Configuration: Evo_1.5_8k_baseTask: NABench DMS-CCV: Overall fitness prediction on NABench deep mutational scanning assays, Contiguous cross validation Spearman ρ
Dataset subset: NABench deep mutational scanning assays (NABench split)
0.216 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench DMS-CCV: Overall fitness prediction on NABench deep mutational scanning assays, Contiguous cross validation Spearman ρ

Aggregated by the NABench authors across NABench deep mutational scanning assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 6, row(Evo_1.5_8k_base), column(Contiguous cross validation Spearman ρ)
Configuration: Evo_1.5_8k_baseTask: NABench DMS-FS: Overall fitness prediction on NABench deep mutational scanning assays, Few-shot Spearman ρ
Dataset subset: NABench deep mutational scanning assays (NABench split)
0.147 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench DMS-FS: Overall fitness prediction on NABench deep mutational scanning assays, Few-shot Spearman ρ

Aggregated by the NABench authors across NABench deep mutational scanning assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 6, row(Evo_1.5_8k_base), column(Few-shot Spearman ρ)
Configuration: Evo_1.5_8k_baseTask: NABench DMS-RCV: Overall fitness prediction on NABench deep mutational scanning assays, Random cross validation Spearman ρ
Dataset subset: NABench deep mutational scanning assays (NABench split)
0.417 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench DMS-RCV: Overall fitness prediction on NABench deep mutational scanning assays, Random cross validation Spearman ρ

Aggregated by the NABench authors across NABench deep mutational scanning assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 6, row(Evo_1.5_8k_base), column(Random cross validation Spearman ρ)
Configuration: Evo_1.5_8k_baseTask: NABench DMS-ZS-AUC: Overall fitness prediction on NABench deep mutational scanning assays, Zero-shot AUC
Dataset subset: NABench deep mutational scanning assays (NABench split)
0.543 AUROC
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench DMS-ZS-AUC: Overall fitness prediction on NABench deep mutational scanning assays, Zero-shot AUC

Aggregated by the NABench authors across NABench deep mutational scanning assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 6, row(Evo_1.5_8k_base), column(Zero-shot AUC)
Configuration: Evo_1.5_8k_baseTask: NABench DMS-ZS-CORR: Overall fitness prediction on NABench deep mutational scanning assays, Zero-shot Spearman ρ
Dataset subset: NABench deep mutational scanning assays (NABench split)
0.177 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench DMS-ZS-CORR: Overall fitness prediction on NABench deep mutational scanning assays, Zero-shot Spearman ρ

Aggregated by the NABench authors across NABench deep mutational scanning assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 6, row(Evo_1.5_8k_base), column(Zero-shot Spearman ρ)
Configuration: Evo_1.5_8k_baseTask: NABench DMS-ZS-MCC: Overall fitness prediction on NABench deep mutational scanning assays, Zero-shot MCC
Dataset subset: NABench deep mutational scanning assays (NABench split)
0.085 MCC
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench DMS-ZS-MCC: Overall fitness prediction on NABench deep mutational scanning assays, Zero-shot MCC

Aggregated by the NABench authors across NABench deep mutational scanning assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 6, row(Evo_1.5_8k_base), column(Zero-shot MCC)
Configuration: Evo_1.5_8k_baseTask: NABench DMS-ZS-NDCG: Overall fitness prediction on NABench deep mutational scanning assays, Zero-shot NDCG
Dataset subset: NABench deep mutational scanning assays (NABench split)
0.396 NDCG (cutoff not stated)
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench DMS-ZS-NDCG: Overall fitness prediction on NABench deep mutational scanning assays, Zero-shot NDCG

Aggregated by the NABench authors across NABench deep mutational scanning assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 6, row(Evo_1.5_8k_base), column(Zero-shot NDCG)
Configuration: Evo_1.5_8k_baseTask: NABench FS-CORR-APTAMER: Fitness prediction on aptamer assays, few-shot
Dataset subset: NABench aptamer assays (NABench split)
0.217 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench FS-CORR-APTAMER: Fitness prediction on aptamer assays, few-shot

Scored few-shot across the NABench aptamer assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 9, row(Evo_1.5_8k_base), column(aptamer)
Configuration: Evo_1.5_8k_baseTask: NABench FS-CORR-ENHANCER: Fitness prediction on enhancer assays, few-shot
Dataset subset: NABench enhancer assays (NABench split)
0.039 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench FS-CORR-ENHANCER: Fitness prediction on enhancer assays, few-shot

Scored few-shot across the NABench enhancer assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 9, row(Evo_1.5_8k_base), column(enhancer)
Configuration: Evo_1.5_8k_baseTask: NABench FS-CORR-MRNA: Fitness prediction on mRNA assays, few-shot
Dataset subset: NABench mRNA assays (NABench split)
0.294 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench FS-CORR-MRNA: Fitness prediction on mRNA assays, few-shot

Scored few-shot across the NABench mRNA assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 9, row(Evo_1.5_8k_base), column(mRNA)
Configuration: Evo_1.5_8k_baseTask: NABench FS-CORR-PROMOTER: Fitness prediction on promoter assays, few-shot
Dataset subset: NABench promoter assays (NABench split)
0.052 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench FS-CORR-PROMOTER: Fitness prediction on promoter assays, few-shot

Scored few-shot across the NABench promoter assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 9, row(Evo_1.5_8k_base), column(promoter)
Configuration: Evo_1.5_8k_baseTask: NABench FS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, few-shot
Dataset subset: NABench ribozyme assays (NABench split)
0.153 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench FS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, few-shot

Scored few-shot across the NABench ribozyme assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 9, row(Evo_1.5_8k_base), column(ribozyme)
Configuration: Evo_1.5_8k_baseTask: NABench FS-CORR-TRNA: Fitness prediction on tRNA assays, few-shot
Dataset subset: NABench tRNA assays (NABench split)
0.11 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench FS-CORR-TRNA: Fitness prediction on tRNA assays, few-shot

Scored few-shot across the NABench tRNA assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 9, row(Evo_1.5_8k_base), column(tRNA)
Configuration: Evo_1.5_8k_baseTask: NABench RCV-CORR-APTAMER: Fitness prediction on aptamer assays, supervised, random cross validation
Dataset subset: NABench aptamer assays (NABench split)
0.419 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench RCV-CORR-APTAMER: Fitness prediction on aptamer assays, supervised, random cross validation

Scored supervised, random cross validation across the NABench aptamer assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 10, row(Evo_1.5_8k_base), column(aptamer)
Configuration: Evo_1.5_8k_baseTask: NABench RCV-CORR-ENHANCER: Fitness prediction on enhancer assays, supervised, random cross validation
Dataset subset: NABench enhancer assays (NABench split)
0.169 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench RCV-CORR-ENHANCER: Fitness prediction on enhancer assays, supervised, random cross validation

Scored supervised, random cross validation across the NABench enhancer assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 10, row(Evo_1.5_8k_base), column(enhancer)
Configuration: Evo_1.5_8k_baseTask: NABench RCV-CORR-MRNA: Fitness prediction on mRNA assays, supervised, random cross validation
Dataset subset: NABench mRNA assays (NABench split)
0.491 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench RCV-CORR-MRNA: Fitness prediction on mRNA assays, supervised, random cross validation

Scored supervised, random cross validation across the NABench mRNA assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 10, row(Evo_1.5_8k_base), column(mRNA)
Configuration: Evo_1.5_8k_baseTask: NABench RCV-CORR-PROMOTER: Fitness prediction on promoter assays, supervised, random cross validation
Dataset subset: NABench promoter assays (NABench split)
0.443 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench RCV-CORR-PROMOTER: Fitness prediction on promoter assays, supervised, random cross validation

Scored supervised, random cross validation across the NABench promoter assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 10, row(Evo_1.5_8k_base), column(promoter)
Configuration: Evo_1.5_8k_baseTask: NABench RCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, random cross validation
Dataset subset: NABench ribozyme assays (NABench split)
0.412 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench RCV-CORR-RIBOZYME: Fitness prediction on ribozyme assays, supervised, random cross validation

Scored supervised, random cross validation across the NABench ribozyme assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 10, row(Evo_1.5_8k_base), column(ribozyme)
Configuration: Evo_1.5_8k_baseTask: NABench RCV-CORR-TRNA: Fitness prediction on tRNA assays, supervised, random cross validation
Dataset subset: NABench tRNA assays (NABench split)
0.494 Spearman
unitless · higher

Uncertainty: Not yet extracted

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

Evo_1.5_8k_base on NABench RCV-CORR-TRNA: Fitness prediction on tRNA assays, supervised, random cross validation

Scored supervised, random cross validation across the NABench tRNA assays.

Aggregation: Not reported

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 10, row(Evo_1.5_8k_base), column(tRNA)

Source checking is not independent reproduction. Release 2026-11-02-a7f03c9e55a5.

Use this configuration

How it works, versions and access

Additional methodological details, versions and access terms have not yet been extracted into a structured profile for this configuration. Consult the linked sources and evaluation records below.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

0 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statementOriginal source and locationReview and provenance

No evidence rows match these filters. Choose another scope or clear the search.

Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

1 source record and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: nabench-method-evo-1-5-8k-base

areas
rna-transcriptomes
source locator
Table 7, row(Evo_1.5_8k_base)
missing metadata
checkpoint revision: reason: unreported; parameters: reason: unextracted
provenance note
Nucleotide foundation model evaluated by the NABench authors under their fitness prediction protocol.
Related records

Suggest a correction