rewirebio.iobenchmarks
Configuration

Pan-feature classifier over all cfDNA classifier scores (GRAIL prototype), CCGA substudy 1

Configuration as run in the cited comparison.

1 evaluation · 1 result

Overview

Pan-feature classifier over all cfDNA classifier scores (GRAIL prototype): Gradient-boosted decision trees (XGBoost) over the output scores of the nine cfDNA feature classifiers, excluding the clinical classifier.

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Evaluations and results

1 evaluation · 1 result. Different protocols are not a single leaderboard.

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Configuration: Pan-feature classifier over all cfDNA classifier scores (GRAIL prototype), CCGA substudy 1Protocol: CCGA substudy 1 validation set: cancer signal sensitivity at 98% specificity
Dataset: CCGA substudy 1 validation set (847 analysable participants)
36% (31%–40%) Sensitivity at 98% specificity (validation set, post hoc 98% specificity threshold)
percent · higher

Uncertainty: 95% CI 31 to 40. Clopper-Pearson exact binomial interval (STAR Methods, statistical analysis)

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

pan-feature on CCGA substudy 1 validation set: cancer signal sensitivity at 98% specificity

ctdnajam-20261010-protocol-ccga1-validation-sens-98spec

Aggregation: Not reported

Evaluation of cell-free DNA approaches for multi-cancer early detection · Table 3, row 'pan-feature', validation set, sensitivity and TP/total cancer samples 165/464

Source checking is not independent reproduction. Release 2026-10-10-cbb3da59bc08.

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Evidence

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Claims, original sources and review scope · Release 2026-10-10-cbb3da59bc08
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Release 2026-10-10-cbb3da59bc08 · Record review: source checked

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Technical metadata and extraction receipts

Stable ID: ctdnajam-20261010-config-pan-feature

areas
dna-genomes
contexts
clinical_research
method types
supervised_machine_learning
reported name
pan-feature
foundation model eligible
false
source locator
Table 2; STAR Methods, Pan-feature classifier
parameters
Scores from the WGBS, targeted sequencing and WGS classifiers
missing metadata
version: reason: unreported; note: Prototype classifier; no release or commit is printed
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