CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3)
Primary source inspected for the scoped post-cutoff passage-retrieval extraction. Automated review does not establish replication.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
21 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.access_note An explicit versioned-URL fetch attempt (https://www.biorxiv.org/content/10.1101/2025.09.10.675443v3.full.pdf) returned HTTP 429 at 2026-10-07T09:48Z and was not retried. The unversioned URL above was used instead; its v3 identity is confirmed by the in-document page header ("this version posted August 29, 2026") and by the bioRxiv API version-history record (date 2026-08-29, version 3, title matches), not by fetching the versioned URL's bytes. Source metadata | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) No field-specific location recorded Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.artifact_retrieved_at 2026-10-07T09:28:49Z Source metadata | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) No field-specific location recorded Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.artifact_sha256 6beb79ede82f7263a06eafc844bcb4ae41538323e3c9a9a7fa5420f08a8add55 Source metadata | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) No field-specific location recorded Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.artifact_url https://www.biorxiv.org/content/10.1101/2025.09.10.675443.full.pdf Source metadata | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) No field-specific location recorded Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.code_data_model_reuse Repository-root GitHub licence metadata is null and no root LICENSE file exists, per direct GitHub API inspection (gh api repos/creisle/civicfact). This does not mean the repository has no LICENSE file anywhere: a nested file, data_builder/LICENSE, is GNU GPL version 3 (29 June 2007), confirmed at pinned commit 1a767d889b015a836f0f4331afcac5cef165ec7f (https://github.com/creisle/civicfact/blob/1a767d889b015a836f0f4331afcac5cef165ec7f/data_builder/LICENSE). The adjacent data_builder/pyproject.toml does not explicitly declare a licence. This nested GPLv3 file's scope (e.g. whether it covers the full dataset, trained models, or the experiments/ and bioconverters/ directories) is not established by this inspection and is not assumed; do not treat it as licensing every repository component. Article licence (CC-BY-4.0) is a separate fact from code/data/model reuse terms. No code/data/model copies are included in this record. Source metadata | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) No field-specific location recorded Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.doi 10.1101/2025.09.10.675443 Source metadata | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) No field-specific location recorded Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.license CC-BY-4.0 (article, per bioRxiv API license field cc_by) Source metadata | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) No field-specific location recorded Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.publication_status preprint Source metadata | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) No field-specific location recorded Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.retrieved_at 2026-10-07T09:28:49Z Source metadata | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) No field-specific location recorded Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.review_artifact data/omics/use-case-coverage-egfr-20261007/clinical/artifacts/civic-fact-v3-biorxiv.pdf.gz Source metadata | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) No field-specific location recorded Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Sources and history
View linked audit checks and correction history
Release 2026-10-07-1448159e6a81 · Record review: source checked
Technical metadata and extraction receipts
Stable ID: ucc-clinical-egfr-source-civicfact-v3
- areas
- dna-genomes
- contexts
- clinical_research
- url
- https://www.biorxiv.org/content/10.1101/2025.09.10.675443.full.pdf
- retrieved at
- 2026-10-07T09:28:49Z
- version
- bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA.
- publication status
- preprint
- doi
- 10.1101/2025.09.10.675443
- artifact sha256
- 6beb79ede82f7263a06eafc844bcb4ae41538323e3c9a9a7fa5420f08a8add55
- artifact url
- https://www.biorxiv.org/content/10.1101/2025.09.10.675443.full.pdf
- artifact retrieved at
- 2026-10-07T09:28:49Z
- review artifact
- data/omics/use-case-coverage-egfr-20261007/clinical/artifacts/civic-fact-v3-biorxiv.pdf.gz
- license
- CC-BY-4.0 (article, per bioRxiv API license field cc_by)
- code data model reuse
- Repository-root GitHub licence metadata is null and no root LICENSE file exists, per direct GitHub API inspection (gh api repos/creisle/civicfact). This does not mean the repository has no LICENSE file anywhere: a nested file, data_builder/LICENSE, is GNU GPL version 3 (29 June 2007), confirmed at pinned commit 1a767d889b015a836f0f4331afcac5cef165ec7f (https://github.com/creisle/civicfact/blob/1a767d889b015a836f0f4331afcac5cef165ec7f/data_builder/LICENSE). The adjacent data_builder/pyproject.toml does not explicitly declare a licence. This nested GPLv3 file's scope (e.g. whether it covers the full dataset, trained models, or the experiments/ and bioconverters/ directories) is not established by this inspection and is not assumed; do not treat it as licensing every repository component. Article licence (CC-BY-4.0) is a separate fact from code/data/model reuse terms. No code/data/model copies are included in this record.
- version note
- This v3 preprint is a distinct version from the PMC12458922 cached copy, which is v2 (posted 2025-09-15, same DOI, different title/author list). The two versions must not be conflated; this source record covers v3 only.
- access note
- An explicit versioned-URL fetch attempt (https://www.biorxiv.org/content/10.1101/2025.09.10.675443v3.full.pdf) returned HTTP 429 at 2026-10-07T09:48Z and was not retried. The unversioned URL above was used instead; its v3 identity is confirmed by the in-document page header ("this version posted August 29, 2026") and by the bioRxiv API version-history record (date 2026-08-29, version 3, title matches), not by fetching the versioned URL's bytes.