CIViC entries submitted or revised in the stated window, used to probe curation drift after the CIViC-Fact dataset's last build. Pan-cancer; not EGFR- or NSCLC-tagged. Partial coverage only: most of the original 150 candidates are excluded before scoring, by design, for full-text access, source overlap, data-quality, and evidence-sufficiency reasons.
These checks assess whether the evidence supports a reproducible investigation. A source-checked score alone does not meet these requirements.
Release 2026-10-07-1448159e6a81 · Evidence verified: Not verified
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2 evaluations · 2 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: Fine-tuned MedCPT cross-encoder (passage retrieval) | Protocol: CIViC-Fact v3 within-linked-publication passage retrieval, post-cutoff cohort Dataset: CIViC-Fact v3 post-cutoff temporal-evaluation cohort, 2026-03-03 to 2026-06-09 | 37/40 (92.5%) appropriate_retrieval_rate_postcutoff percent · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCIViC-Fact v3 post-cutoff within-linked-publication retrieval: fine-tuned MedCPT cross-encoder Not reported Aggregation: Not reported CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) · Results, 'Passage Retrieval Models Perform Well without Fine-Tuning' subsection (printed page 14 / PDF page 15): '...both the fine-tuned MedCPT model and the 8B Qwen 3 reranker performed similarly retrieving appropriate content for 37 of the remaining 40 entries (92.5%).' |
| Configuration: Qwen3-Reranker-8B (pretrained, not fine-tuned) | Protocol: CIViC-Fact v3 within-linked-publication passage retrieval, post-cutoff cohort Dataset: CIViC-Fact v3 post-cutoff temporal-evaluation cohort, 2026-03-03 to 2026-06-09 | 37/40 (92.5%) appropriate_retrieval_rate_postcutoff percent · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceCIViC-Fact v3 post-cutoff within-linked-publication retrieval: Qwen3-Reranker-8B (pretrained) Not reported Aggregation: Not reported CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) · Results, 'Passage Retrieval Models Perform Well without Fine-Tuning' subsection (printed page 14 / PDF page 15): '...both the fine-tuned MedCPT model and the 8B Qwen 3 reranker performed similarly retrieving appropriate content for 37 of the remaining 40 entries (92.5%).' |
Source checking is not independent reproduction. Release 2026-10-07-1448159e6a81.
A dataset supplies biological observations. The evaluation protocol defines how those observations are split, used and scored.
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
17 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.population.candidate_entries 150 Context-only references | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) Methods, 'Temporal evaluation' subsection (selection chain); Supplementary Figure 2 (printed page 33 / PDF page 34, 'Selection of CIViC entries for the post-cutoff cohort'); retrieval result reported in Results, 'Passage Retrieval Models Perform Well without Fine-Tuning' subsection (printed page 14 / PDF page 15). Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.population.entries_curator_evaluated 66 Context-only references | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) Methods, 'Temporal evaluation' subsection (selection chain); Supplementary Figure 2 (printed page 33 / PDF page 34, 'Selection of CIViC entries for the post-cutoff cohort'); retrieval result reported in Results, 'Passage Retrieval Models Perform Well without Fine-Tuning' subsection (printed page 14 / PDF page 15). Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.population.entries_maintext_eligible 42 Context-only references | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) Methods, 'Temporal evaluation' subsection (selection chain); Supplementary Figure 2 (printed page 33 / PDF page 34, 'Selection of CIViC entries for the post-cutoff cohort'); retrieval result reported in Results, 'Passage Retrieval Models Perform Well without Fine-Tuning' subsection (printed page 14 / PDF page 15). Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.population.entries_scored 40 Context-only references | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) Methods, 'Temporal evaluation' subsection (selection chain); Supplementary Figure 2 (printed page 33 / PDF page 34, 'Selection of CIViC entries for the post-cutoff cohort'); retrieval result reported in Results, 'Passage Retrieval Models Perform Well without Fine-Tuning' subsection (printed page 14 / PDF page 15). Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.population.excluded_full_text_not_accessible 68 Context-only references | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) Methods, 'Temporal evaluation' subsection (selection chain); Supplementary Figure 2 (printed page 33 / PDF page 34, 'Selection of CIViC entries for the post-cutoff cohort'); retrieval result reported in Results, 'Passage Retrieval Models Perform Well without Fine-Tuning' subsection (printed page 14 / PDF page 15). Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.population.excluded_manuscript_in_train_dev_test 14 Context-only references | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) Methods, 'Temporal evaluation' subsection (selection chain); Supplementary Figure 2 (printed page 33 / PDF page 34, 'Selection of CIViC entries for the post-cutoff cohort'); retrieval result reported in Results, 'Passage Retrieval Models Perform Well without Fine-Tuning' subsection (printed page 14 / PDF page 15). Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.population.excluded_nei_requires_supplement_or_images 24 Context-only references | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) Methods, 'Temporal evaluation' subsection (selection chain); Supplementary Figure 2 (printed page 33 / PDF page 34, 'Selection of CIViC entries for the post-cutoff cohort'); retrieval result reported in Results, 'Passage Retrieval Models Perform Well without Fine-Tuning' subsection (printed page 14 / PDF page 15). Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.population.excluded_nei_substantially_revised_claim 2 Context-only references | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) Methods, 'Temporal evaluation' subsection (selection chain); Supplementary Figure 2 (printed page 33 / PDF page 34, 'Selection of CIViC entries for the post-cutoff cohort'); retrieval result reported in Results, 'Passage Retrieval Models Perform Well without Fine-Tuning' subsection (printed page 14 / PDF page 15). Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.population.excluded_non_content_data_error 2 Context-only references | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) Methods, 'Temporal evaluation' subsection (selection chain); Supplementary Figure 2 (printed page 33 / PDF page 34, 'Selection of CIViC entries for the post-cutoff cohort'); retrieval result reported in Results, 'Passage Retrieval Models Perform Well without Fine-Tuning' subsection (printed page 14 / PDF page 15). Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.population.note 150 - 68 - 14 - 2 = 66; 66 - 24 (NEI, supplement/image required) = 42 main-text-eligible; 42 - 2 (NEI, substantially revised claim) = 40 scored (9 + 7 + 24 = 40). Enriched cohort per source Discussion; not representative of CIViC overall. No EGFR or NSCLC subgroup is tagged anywhere in this cohort. Context-only references | CIViC-Fact: a proof-of-concept framework for AI-assisted verification of cancer variant interpretations (bioRxiv v3) Methods, 'Temporal evaluation' subsection (selection chain); Supplementary Figure 2 (printed page 33 / PDF page 34, 'Selection of CIViC entries for the post-cutoff cohort'); retrieval result reported in Results, 'Passage Retrieval Models Perform Well without Fine-Tuning' subsection (printed page 14 / PDF page 15). Version: bioRxiv preprint doi:10.1101/2025.09.10.675443, Version 3, posted 2026-08-29 (per in-document header and bioRxiv API version metadata); published: NA. | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
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Release 2026-10-07-1448159e6a81 · Record review: source checked
Stable ID: ucc-clinical-egfr-data-civicfact-v3-postcutoff