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dauparas/ProteinMPNN: protein_mpnn_utils.py

8907e6671bfbfc92303b5f79c4b5e6ce47cdef57

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2 models
1 baseline
1 evidence claim

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ProteinMPNN: description: Description ProteinMPNN designs amino-acid sequences for a supplied protein backbone. (Reviewed profile summary (2026-09-16): evidence-official-ea568a52ea3ab476db6a, evidence-official-7b6fdf915d9c6950ad0d, evidence-official-019aff235ae2c3cf29d6, evidence-official-92b0ae57a020cbc40fe7, evidence-official-0b8003691827eb09b0a4: ProteinMPNN paper: main-text model development; training/README.md: multi-chain training set, list.csv and cluster manifests; protein_mpnn_utils.py: ProteinMPNN; Supplementary Materials: Methods for training multi-chain models / Training data)

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Models (2)

Baselines (1)

Protein sequence recovery specialist

Evidence

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Evidence table

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18 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statement	Original source and location	Review and provenance
Artifact format original_artifact Source metadata	dauparas/ProteinMPNN: protein_mpnn_utils.py Original source ↗ No field-specific location recorded Version: 8907e6671bfbfc92303b5f79c4b5e6ce47cdef57 Retrieved: 2026-09-16T19:46:18.948060+00:00	catalogued No individual claim review recorded Audit details Field: `attributes.artifact_format` Source artifact SHA-256: `74c8f9b7553422a7a0bbd705874844ee103c8926c2c96f154a87e0b824071e1b` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Artifact SHA-256 74c8f9b7553422a7a0bbd705874844ee103c8926c2c96f154a87e0b824071e1b Source metadata	dauparas/ProteinMPNN: protein_mpnn_utils.py Original source ↗ No field-specific location recorded Version: 8907e6671bfbfc92303b5f79c4b5e6ce47cdef57 Retrieved: 2026-09-16T19:46:18.948060+00:00	catalogued No individual claim review recorded Audit details Field: `attributes.artifact_sha256` Source artifact SHA-256: `74c8f9b7553422a7a0bbd705874844ee103c8926c2c96f154a87e0b824071e1b` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Artifact url https://raw.githubusercontent.com/dauparas/ProteinMPNN/8907e6671bfbfc92303b5f79c4b5e6ce47cdef57/protein_mpnn_utils.py Source metadata	dauparas/ProteinMPNN: protein_mpnn_utils.py Original source ↗ No field-specific location recorded Version: 8907e6671bfbfc92303b5f79c4b5e6ce47cdef57 Retrieved: 2026-09-16T19:46:18.948060+00:00	catalogued No individual claim review recorded Audit details Field: `attributes.artifact_url` Source artifact SHA-256: `74c8f9b7553422a7a0bbd705874844ee103c8926c2c96f154a87e0b824071e1b` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Hash scope SHA-256 of retrieved original artifact bytes Source metadata	dauparas/ProteinMPNN: protein_mpnn_utils.py Original source ↗ No field-specific location recorded Version: 8907e6671bfbfc92303b5f79c4b5e6ce47cdef57 Retrieved: 2026-09-16T19:46:18.948060+00:00	catalogued No individual claim review recorded Audit details Field: `attributes.hash_scope` Source artifact SHA-256: `74c8f9b7553422a7a0bbd705874844ee103c8926c2c96f154a87e0b824071e1b` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Retrieval note Direct source retrieval Source metadata	dauparas/ProteinMPNN: protein_mpnn_utils.py Original source ↗ No field-specific location recorded Version: 8907e6671bfbfc92303b5f79c4b5e6ce47cdef57 Retrieved: 2026-09-16T19:46:18.948060+00:00	catalogued No individual claim review recorded Audit details Field: `attributes.retrieval_note` Source artifact SHA-256: `74c8f9b7553422a7a0bbd705874844ee103c8926c2c96f154a87e0b824071e1b` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Retrieved at 2026-09-16T19:46:18.948060+00:00 Source metadata	dauparas/ProteinMPNN: protein_mpnn_utils.py Original source ↗ No field-specific location recorded Version: 8907e6671bfbfc92303b5f79c4b5e6ce47cdef57 Retrieved: 2026-09-16T19:46:18.948060+00:00	catalogued No individual claim review recorded Audit details Field: `attributes.retrieved_at` Source artifact SHA-256: `74c8f9b7553422a7a0bbd705874844ee103c8926c2c96f154a87e0b824071e1b` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Review method 1 values automated-source-review Source metadata	dauparas/ProteinMPNN: protein_mpnn_utils.py Original source ↗ No field-specific location recorded Version: 8907e6671bfbfc92303b5f79c4b5e6ce47cdef57 Retrieved: 2026-09-16T19:46:18.948060+00:00	catalogued No individual claim review recorded Audit details Field: `attributes.review.method` Source artifact SHA-256: `74c8f9b7553422a7a0bbd705874844ee103c8926c2c96f154a87e0b824071e1b` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Review: scope Only cited profile claims; no numerical performance result added or independently reproduced. Source metadata	dauparas/ProteinMPNN: protein_mpnn_utils.py Original source ↗ No field-specific location recorded Version: 8907e6671bfbfc92303b5f79c4b5e6ce47cdef57 Retrieved: 2026-09-16T19:46:18.948060+00:00	catalogued No individual claim review recorded Audit details Field: `attributes.review.scope` Source artifact SHA-256: `74c8f9b7553422a7a0bbd705874844ee103c8926c2c96f154a87e0b824071e1b` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Source location protein_mpnn_utils.py Source metadata	dauparas/ProteinMPNN: protein_mpnn_utils.py Original source ↗ No field-specific location recorded Version: 8907e6671bfbfc92303b5f79c4b5e6ce47cdef57 Retrieved: 2026-09-16T19:46:18.948060+00:00	catalogued No individual claim review recorded Audit details Field: `attributes.source_locator` Source artifact SHA-256: `74c8f9b7553422a7a0bbd705874844ee103c8926c2c96f154a87e0b824071e1b` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Url https://github.com/dauparas/ProteinMPNN/blob/8907e6671bfbfc92303b5f79c4b5e6ce47cdef57/protein_mpnn_utils.py Source metadata	dauparas/ProteinMPNN: protein_mpnn_utils.py Original source ↗ No field-specific location recorded Version: 8907e6671bfbfc92303b5f79c4b5e6ce47cdef57 Retrieved: 2026-09-16T19:46:18.948060+00:00	catalogued No individual claim review recorded Audit details Field: `attributes.url` Source artifact SHA-256: `74c8f9b7553422a7a0bbd705874844ee103c8926c2c96f154a87e0b824071e1b` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact

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Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

Primary-source artifact retrieved for field-level model-profile review. Source inspection is not independent model reproduction.

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Technical metadata and extraction receipts

Stable ID: evidence-official-019aff235ae2c3cf29d6

url: https://github.com/dauparas/ProteinMPNN/blob/8907e6671bfbfc92303b5f79c4b5e6ce47cdef57/protein_mpnn_utils.py
artifact url: https://raw.githubusercontent.com/dauparas/ProteinMPNN/8907e6671bfbfc92303b5f79c4b5e6ce47cdef57/protein_mpnn_utils.py
version: 8907e6671bfbfc92303b5f79c4b5e6ce47cdef57
retrieved at: 2026-09-16T19:46:18.948060+00:00
artifact sha256: 74c8f9b7553422a7a0bbd705874844ee103c8926c2c96f154a87e0b824071e1b
artifact format: original_artifact
hash scope: SHA-256 of retrieved original artifact bytes
retrieval note: Direct source retrieval
source locator: protein_mpnn_utils.py
review: method: automated-source-review; scope: Only cited profile claims; no numerical performance result added or independently reproduced.

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