Jores GC and motif linear regression
Named prediction method identified in the cited primary source. Exact fitted configurations and scores are separate records.
Overview
Named prediction method identified in the cited primary source. Exact fitted configurations and scores are separate records.
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Evaluations and results
2 evaluations · 2 results. Different protocols are not a single leaderboard.
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: Jores maize-protoplasts gc-motif-linear | Protocol: Jores 2021 promoter strength: maize-protoplasts Dataset subset: Jores 10% promoter holdout: maize-protoplasts | 0.45 pearson_r_squared dimensionless · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceJores maize-protoplasts gc-motif-linear Not reported Aggregation: Not reported Jores et al. 2021 plant core promoter models · Figure 8a, maize-protoplasts panel; p849 Computational models predict and improve promoter strength |
| Configuration: Jores tobacco-leaves gc-motif-linear | Protocol: Jores 2021 promoter strength: tobacco-leaves Dataset subset: Jores 10% promoter holdout: tobacco-leaves | 0.51 pearson_r_squared dimensionless · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceJores tobacco-leaves gc-motif-linear Not reported Aggregation: Not reported Jores et al. 2021 plant core promoter models · Figure 8a, tobacco-leaves panel; p849 Computational models predict and improve promoter strength |
Source checking is not independent reproduction. Release 2026-09-30-e37e3ab1284d.
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Versions and evaluated configurations
- Jores maize-protoplasts gc-motif-linear · variant of
- Jores tobacco-leaves gc-motif-linear · variant of
Strengths, limitations and unresolved questions
Evidence
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Sources and history
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Release 2026-09-30-e37e3ab1284d · Record review: source checked
1 source records and release history
- Jores et al. 2021 plant core promoter models · Original source · Nature Plants 7:842–855, 2021; author-hosted version of record
Technical metadata and extraction receipts
Stable ID: uc20260930-method-jores-gc-and-motif-linear-regression
- areas
- dna-genomes
- source locator
- Computational modelling of promoter strength; Figure 8a,b
- review
- method: automated_source_review; reviewer: Codex experimental-use-case curation; date: 2026-09-30; reviewed at: 2026-09-30T21:40:59.576893+00:00; scope: Primary-source transcription and catalogue applicability audit; not human scientific review or independent experimental reproduction.
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- Family/method identity only; no undocumented checkpoint equivalence.
Related records
- variant of: Jores maize-protoplasts gc-motif-linear
- variant of: Jores tobacco-leaves gc-motif-linear