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Evaluation

OHE MSAT on ProteinGym SUP-SUB-SPEARMAN-RAND: Supervised substitutions, random split, Spearman

ProteinGym evaluation of OHE MSAT on Supervised substitutions, random split, Spearman, scored with Spearman.

Research readiness

These checks assess whether the evidence supports a reproducible investigation. A source-checked score alone does not meet these requirements.

Release 2026-09-29-06401fd5b220 · Evidence verified: Not verified

Evidence incomplete

Replay metrics

Exact outcomes, predictions, identifiers and evaluator are connected.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • metric replay: verification is missing

Verified: Not verified

Evidence incomplete

Investigate discrepancies

Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • metric replay: verification is missing
  • annotations: verification is missing
  • dependence: verification is missing

Verified: Not verified

Evidence incomplete

Run locally

A pinned recipe describes the inputs, environment and resource requirements.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • recipe pinned: verification is missing
  • resource estimate: verification is missing

Verified: Not verified

Evidence incomplete

Validate independently

Separate data and exposure records support an independent test.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • independent validation: verification is missing
  • overlap checked: verification is missing

Verified: Not verified

Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.

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No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.

Read reviewed discrepancy investigations

Evaluation results

1 evaluation · 1 result. Different protocols are not a single leaderboard.

Filter evaluations

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configurationProtocol and datasetFindingEvidence and details
Configuration: OHE MSATTask: ProteinGym SUP-SUB-SPEARMAN-RAND: Supervised substitutions, random split, Spearman
Dataset subset: ProteinGym substitution DMS assays (ProteinGym split)
0.536 spearman
correlation · higher

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

OHE MSAT on ProteinGym SUP-SUB-SPEARMAN-RAND: Supervised substitutions, random split, Spearman

Supervised fitness prediction under three cross-validation schemes: contiguous, modulo and random splits.

Aggregation: Not reported

ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design · Table 3, row(MSAT), column(Supervised substitutions, random split, Spearman)

Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.

Evaluation procedure

Supervised fitness prediction under three cross-validation schemes: contiguous, modulo and random splits.

Configuration
OHE MSAT
Task
ProteinGym SUP-SUB-SPEARMAN-RAND: Supervised substitutions, random split, Spearman
Dataset subset
ProteinGym substitution DMS assays (ProteinGym split)
origin
Author-reported evaluation
configuration
Not reported
protocol id
proteingym-task-sup-sub-spearman-rand
metric implementation
Spearman

Metadata review: source checked. Unreported conditions prevent automatic comparisons.

Reproduction

Split
Not reported
Adaptation
Not reported
Scoring implementation
Spearman

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

13 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statementOriginal source and locationReview and provenance
attributes.comparison.metric_implementation
Spearman
Context-only references
ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design

Original source ↗

Table 3, row(MSAT), column(Supervised substitutions, random split, Spearman)

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.522924+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.metric_implementation

Source artifact SHA-256: a3b08cc4a6befd64620cf0f287d78d55a36dc2639955f52c5655f83833c50104

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.comparison.protocol_id
proteingym-task-sup-sub-spearman-rand
Context-only references
ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design

Original source ↗

Table 3, row(MSAT), column(Supervised substitutions, random split, Spearman)

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.522924+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.protocol_id

Source artifact SHA-256: a3b08cc4a6befd64620cf0f287d78d55a36dc2639955f52c5655f83833c50104

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.evaluation_group_id
evaluation-group-proteingym-table-3-supervised-substitutions-rand-ohe-msat
Context-only references
ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design

Original source ↗

Table 3, row(MSAT), column(Supervised substitutions, random split, Spearman)

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.522924+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.evaluation_group_id

Source artifact SHA-256: a3b08cc4a6befd64620cf0f287d78d55a36dc2639955f52c5655f83833c50104

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.evaluation_group_name
OHE MSAT · supervised substitutions, random split
Context-only references
ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design

Original source ↗

Table 3, row(MSAT), column(Supervised substitutions, random split, Spearman)

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.522924+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.evaluation_group_name

Source artifact SHA-256: a3b08cc4a6befd64620cf0f287d78d55a36dc2639955f52c5655f83833c50104

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.evaluation_group_note
Counts source-reported evaluation scopes, not individual runs or assays.
Context-only references
ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design

Original source ↗

Table 3, row(MSAT), column(Supervised substitutions, random split, Spearman)

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.522924+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.evaluation_group_note

Source artifact SHA-256: a3b08cc4a6befd64620cf0f287d78d55a36dc2639955f52c5655f83833c50104

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.origin
author_reported
Context-only references
ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design

Original source ↗

Table 3, row(MSAT), column(Supervised substitutions, random split, Spearman)

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.522924+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.origin

Source artifact SHA-256: a3b08cc4a6befd64620cf0f287d78d55a36dc2639955f52c5655f83833c50104

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.protocol
Supervised fitness prediction under three cross-validation schemes: contiguous, modulo and random splits.
Context-only references
ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design

Original source ↗

Table 3, row(MSAT), column(Supervised substitutions, random split, Spearman)

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.522924+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.protocol

Source artifact SHA-256: a3b08cc4a6befd64620cf0f287d78d55a36dc2639955f52c5655f83833c50104

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.source_locator
Table 3, row(MSAT), column(Supervised substitutions, random split, Spearman)
Context-only references
ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design

Original source ↗

Table 3, row(MSAT), column(Supervised substitutions, random split, Spearman)

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.522924+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.source_locator

Source artifact SHA-256: a3b08cc4a6befd64620cf0f287d78d55a36dc2639955f52c5655f83833c50104

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

description
ProteinGym evaluation of OHE MSAT on Supervised substitutions, random split, Spearman, scored with Spearman.
Context-only references
ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design

Original source ↗

Table 3, row(MSAT), column(Supervised substitutions, random split, Spearman)

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.522924+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: description

Source artifact SHA-256: a3b08cc4a6befd64620cf0f287d78d55a36dc2639955f52c5655f83833c50104

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Relationship: benchmark
proteingym-task-sup-sub-spearman-rand
Context-only references
ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design

Original source ↗

Table 3, row(MSAT), column(Supervised substitutions, random split, Spearman)

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.522924+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: links:benchmark:proteingym-task-sup-sub-spearman-rand

Source artifact SHA-256: a3b08cc4a6befd64620cf0f287d78d55a36dc2639955f52c5655f83833c50104

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Sources and history

View linked audit checks and correction history

Release 2026-09-29-06401fd5b220 · Record review: source checked

1 source records and release historyDownload this release
Technical metadata and extraction receipts

Stable ID: proteingym-evaluation-ohe-msat-sup-sub-spearman-rand

areas
proteins-complexes
tasks
Supervised substitutions, random split, Spearman
origin
author_reported
protocol
Supervised fitness prediction under three cross-validation schemes: contiguous, modulo and random splits.
comparison
protocol id: proteingym-task-sup-sub-spearman-rand; metric implementation: Spearman
missing metadata
checkpoint revision: unreported; seeds: unreported; budget: unreported; split manifest: unextracted
source locator
Table 3, row(MSAT), column(Supervised substitutions, random split, Spearman)
evaluation group id
evaluation-group-proteingym-table-3-supervised-substitutions-rand-ohe-msat
evaluation group name
OHE MSAT · supervised substitutions, random split
evaluation group note
Counts source-reported evaluation scopes, not individual runs or assays.
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