Open Problems label projection evaluation of scANVI (Seurat v3 2000 HVG) on Label projection on Tabula Muris Senis Lung (random split), Macro F1 score, scored with Macro F1 score.
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1 evaluation · 1 result. Different protocols are not a single leaderboard.
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: scANVI (Seurat v3 2000 HVG) | Task: Open Problems label projection TABULA-MURIS-SENIS-LUNG-RANDOM-F1-MACRO: Label projection on Tabula Muris Senis Lung (random split), Macro F1 score Dataset subset: Tabula Muris Senis Lung (random split) (Open Problems label projection split) | 0.394 f1-macro fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAll lung cells from Tabula Muris Senis, a 500k cell-atlas from 18 organs and tissues across the mouse lifespan. Split into train/test randomly. Dimensions: 24540 cells, 17985 genes. 39 cell types (avg. 629±999 cells per cell type). Aggregation: Not reported openproblems-label primary benchmark evidence · results, dataset(tabula_muris_senis_lung_random), method(scanvi), paramset(Seurat v3 2000 HVG), metric(f1_macro) |
Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.
All lung cells from Tabula Muris Senis, a 500k cell-atlas from 18 organs and tissues across the mouse lifespan. Split into train/test randomly. Dimensions: 24540 cells, 17985 genes. 39 cell types (avg. 629±999 cells per cell type).
Metadata review: source checked. Unreported conditions prevent automatic comparisons.
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10 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.comparison.metric_implementation Macro F1 score Context-only references | openproblems-label primary benchmark evidence results, dataset(tabula_muris_senis_lung_random), method(scanvi), paramset(Seurat v3 2000 HVG), metric(f1_macro) Version: v1.0.0 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.protocol_id open-problems-task-tabula-muris-senis-lung-random-f1-macro Context-only references | openproblems-label primary benchmark evidence results, dataset(tabula_muris_senis_lung_random), method(scanvi), paramset(Seurat v3 2000 HVG), metric(f1_macro) Version: v1.0.0 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.origin author_reported Context-only references | openproblems-label primary benchmark evidence results, dataset(tabula_muris_senis_lung_random), method(scanvi), paramset(Seurat v3 2000 HVG), metric(f1_macro) Version: v1.0.0 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.protocol All lung cells from Tabula Muris Senis, a 500k cell-atlas from 18 organs and tissues across the mouse lifespan. Split into train/test randomly. Dimensions: 24540 cells, 17985 genes. 39 cell types (avg. 629±999 cells per cell type). Context-only references | openproblems-label primary benchmark evidence results, dataset(tabula_muris_senis_lung_random), method(scanvi), paramset(Seurat v3 2000 HVG), metric(f1_macro) Version: v1.0.0 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_locator results, dataset(tabula_muris_senis_lung_random), method(scanvi), paramset(Seurat v3 2000 HVG), metric(f1_macro) Context-only references | openproblems-label primary benchmark evidence results, dataset(tabula_muris_senis_lung_random), method(scanvi), paramset(Seurat v3 2000 HVG), metric(f1_macro) Version: v1.0.0 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| description Open Problems label projection evaluation of scANVI (Seurat v3 2000 HVG) on Label projection on Tabula Muris Senis Lung (random split), Macro F1 score, scored with Macro F1 score. Context-only references | openproblems-label primary benchmark evidence results, dataset(tabula_muris_senis_lung_random), method(scanvi), paramset(Seurat v3 2000 HVG), metric(f1_macro) Version: v1.0.0 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: benchmark open-problems-task-tabula-muris-senis-lung-random-f1-macro Context-only references | openproblems-label primary benchmark evidence results, dataset(tabula_muris_senis_lung_random), method(scanvi), paramset(Seurat v3 2000 HVG), metric(f1_macro) Version: v1.0.0 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: dataset open-problems-dataset-tabula-muris-senis-lung-random-split Context-only references | openproblems-label primary benchmark evidence results, dataset(tabula_muris_senis_lung_random), method(scanvi), paramset(Seurat v3 2000 HVG), metric(f1_macro) Version: v1.0.0 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: model open-problems-method-scanvi-seurat-v3-2000-hvg Context-only references | openproblems-label primary benchmark evidence results, dataset(tabula_muris_senis_lung_random), method(scanvi), paramset(Seurat v3 2000 HVG), metric(f1_macro) Version: v1.0.0 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| name scANVI (Seurat v3 2000 HVG) on Open Problems label projection TABULA-MURIS-SENIS-LUNG-RANDOM-F1-MACRO: Label projection on Tabula Muris Senis Lung (random split), Macro F1 score Context-only references | openproblems-label primary benchmark evidence results, dataset(tabula_muris_senis_lung_random), method(scanvi), paramset(Seurat v3 2000 HVG), metric(f1_macro) Version: v1.0.0 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
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Release 2026-09-29-06401fd5b220 · Record review: source checked
Stable ID: open-problems-evaluation-scanvi-seurat-v3-2000-hvg-tabula-muris-senis-lung-random-f1-macro