scIB official RNA metrics export; pancreas. Source checked, not independently reproduced.
1 evaluation · 12 results. Different protocols are not a single leaderboard.
Protocol: scIB official RNA metrics export · pancreas · Dataset subset: pancreas
Sorted by Adjusted rand index (clusters vs cell-type labels) (higher is better). The best value in each column is highlighted. Decimals are rounded for display; each value links to the printed value and its source.
| Tested configuration | Adjusted rand index (clusters vs cell-type labels) | Normalized mutual information (clusters vs cell-type labels) | Scib asw batch | Scib asw label | Scib cell cycle conservation | Scib clisi | Scib graph connectivity | Scib ilisi | Scib isolated label F1 | Scib isolated label silhouette | Scib kbet | Scib pcr batch |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| liger_embed · hvg, unscaledEvaluation | 0.349 | 0.358 | 0.791 | 0.516 | 0.447 | 0.866 | 0.654 | 0.44 | 0.14 | 0.89 | 0.181 | 0.949 |
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: liger_embed · hvg, unscaled | Protocol: scIB official RNA metrics export · pancreas Dataset subset: pancreas | 0.447 Scib cell cycle conservation unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceliger_embed · scIB official RNA metrics export · pancreas scIB official RNA metrics export Aggregation: unreported scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f · data/metrics.csv row 302, column 7 (cell_cycle_conservation) |
| Configuration: liger_embed · hvg, unscaled | Protocol: scIB official RNA metrics export · pancreas Dataset subset: pancreas | 0.358 Normalized mutual information (clusters vs cell-type labels) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceliger_embed · scIB official RNA metrics export · pancreas scIB official RNA metrics export Aggregation: unreported scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f · data/metrics.csv row 302, column 2 (NMI_cluster/label) |
| Configuration: liger_embed · hvg, unscaled | Protocol: scIB official RNA metrics export · pancreas Dataset subset: pancreas | 0.866 Scib clisi unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceliger_embed · scIB official RNA metrics export · pancreas scIB official RNA metrics export Aggregation: unreported scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f · data/metrics.csv row 302, column 13 (cLISI) |
| Configuration: liger_embed · hvg, unscaled | Protocol: scIB official RNA metrics export · pancreas Dataset subset: pancreas | 0.89 Scib isolated label silhouette unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceliger_embed · scIB official RNA metrics export · pancreas scIB official RNA metrics export Aggregation: unreported scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f · data/metrics.csv row 302, column 9 (isolated_label_silhouette) |
| Configuration: liger_embed · hvg, unscaled | Protocol: scIB official RNA metrics export · pancreas Dataset subset: pancreas | 0.14 Scib isolated label F1 unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceliger_embed · scIB official RNA metrics export · pancreas scIB official RNA metrics export Aggregation: unreported scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f · data/metrics.csv row 302, column 8 (isolated_label_F1) |
| Configuration: liger_embed · hvg, unscaled | Protocol: scIB official RNA metrics export · pancreas Dataset subset: pancreas | 0.791 Scib asw batch unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceliger_embed · scIB official RNA metrics export · pancreas scIB official RNA metrics export Aggregation: unreported scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f · data/metrics.csv row 302, column 5 (ASW_label/batch) |
| Configuration: liger_embed · hvg, unscaled | Protocol: scIB official RNA metrics export · pancreas Dataset subset: pancreas | 0.949 Scib pcr batch unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceliger_embed · scIB official RNA metrics export · pancreas scIB official RNA metrics export Aggregation: unreported scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f · data/metrics.csv row 302, column 6 (PCR_batch) |
| Configuration: liger_embed · hvg, unscaled | Protocol: scIB official RNA metrics export · pancreas Dataset subset: pancreas | 0.44 Scib ilisi unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceliger_embed · scIB official RNA metrics export · pancreas scIB official RNA metrics export Aggregation: unreported scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f · data/metrics.csv row 302, column 12 (iLISI) |
| Configuration: liger_embed · hvg, unscaled | Protocol: scIB official RNA metrics export · pancreas Dataset subset: pancreas | 0.349 Adjusted rand index (clusters vs cell-type labels) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceliger_embed · scIB official RNA metrics export · pancreas scIB official RNA metrics export Aggregation: unreported scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f · data/metrics.csv row 302, column 3 (ARI_cluster/label) |
| Configuration: liger_embed · hvg, unscaled | Protocol: scIB official RNA metrics export · pancreas Dataset subset: pancreas | 0.181 Scib kbet unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceliger_embed · scIB official RNA metrics export · pancreas scIB official RNA metrics export Aggregation: unreported scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f · data/metrics.csv row 302, column 11 (kBET) |
| Configuration: liger_embed · hvg, unscaled | Protocol: scIB official RNA metrics export · pancreas Dataset subset: pancreas | 0.654 Scib graph connectivity unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceliger_embed · scIB official RNA metrics export · pancreas scIB official RNA metrics export Aggregation: unreported scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f · data/metrics.csv row 302, column 10 (graph_conn) |
| Configuration: liger_embed · hvg, unscaled | Protocol: scIB official RNA metrics export · pancreas Dataset subset: pancreas | 0.516 Scib asw label unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceliger_embed · scIB official RNA metrics export · pancreas scIB official RNA metrics export Aggregation: unreported scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f · data/metrics.csv row 302, column 4 (ASW_label) |
Source checking is not independent reproduction. Release 2026-11-02-a7f03c9e55a5.
0 of 4 readiness checks met. These checks assess whether the evidence supports a reproducible investigation; a source-checked score alone does not meet them.
Release 2026-11-02-a7f03c9e55a5 · Evidence verified: Not verified
Exact outcomes, predictions, identifiers and evaluator are connected.
Missing or unresolved evidence
Verified: Not verified
Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.
Missing or unresolved evidence
Verified: Not verified
A pinned recipe describes the inputs, environment and resource requirements.
Missing or unresolved evidence
Verified: Not verified
Separate data and exposure records support an independent test.
Missing or unresolved evidence
Verified: Not verified
Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.
No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.
scIB official RNA metrics export
Metadata review: discovered. Unreported conditions prevent automatic comparisons.
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
22 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Comparison: adaptation unreported Context-only references | scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f data/metrics.csv row 302, column 2 (NMI_cluster/label) Version: 3afbffd3674726e5146797be21cf6bd7470a2c5f | missing or unspecified No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| Comparison: aggregation metric-specific; inspect each result Context-only references | scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f data/metrics.csv row 302, column 2 (NMI_cluster/label) Version: 3afbffd3674726e5146797be21cf6bd7470a2c5f | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| Comparison: dataset version 3afbffd3674726e5146797be21cf6bd7470a2c5f Context-only references | scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f data/metrics.csv row 302, column 2 (NMI_cluster/label) Version: 3afbffd3674726e5146797be21cf6bd7470a2c5f | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| Comparison: inputs unreported Context-only references | scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f data/metrics.csv row 302, column 2 (NMI_cluster/label) Version: 3afbffd3674726e5146797be21cf6bd7470a2c5f | missing or unspecified No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| Comparison: population pancreas Context-only references | scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f data/metrics.csv row 302, column 2 (NMI_cluster/label) Version: 3afbffd3674726e5146797be21cf6bd7470a2c5f | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| Comparison: protocol id acquired-protocol-3f6fa62242423922b5f2 Context-only references | scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f data/metrics.csv row 302, column 2 (NMI_cluster/label) Version: 3afbffd3674726e5146797be21cf6bd7470a2c5f | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| Comparison: split pancreas Context-only references | scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f data/metrics.csv row 302, column 2 (NMI_cluster/label) Version: 3afbffd3674726e5146797be21cf6bd7470a2c5f | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| Conditions: batches 9 Context-only references | scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f data/metrics.csv row 302, column 2 (NMI_cluster/label) Version: 3afbffd3674726e5146797be21cf6bd7470a2c5f | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| Conditions: cells 16382 Context-only references | scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f data/metrics.csv row 302, column 2 (NMI_cluster/label) Version: 3afbffd3674726e5146797be21cf6bd7470a2c5f | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| Conditions: configuration liger_embed Context-only references | scIB: 3afbffd3674726e5146797be21cf6bd7470a2c5f data/metrics.csv row 302, column 2 (NMI_cluster/label) Version: 3afbffd3674726e5146797be21cf6bd7470a2c5f | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
Release 2026-11-02-a7f03c9e55a5 · Record review: discovered
Stable ID: acquired-evaluation-b36494b2038b507cfaba