| Configuration: PIDC | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: MHSC-GM | 0.97 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePIDC · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 16, column 6 |
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| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: MHSC-GM | 0.89 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 16, column 20 |
|---|
| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: MHSC-GM | 0.96 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 16, column 19 |
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| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: MHSC-GM | 1.07 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 16, column 9 |
|---|
| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: MHSC-GM | 1.87 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 11, column 9 |
|---|
| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: MHSC-GM | 7.23 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 6, column 17 |
|---|
| Configuration: GENIE3 | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: MHSC-GM | 8.45 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGENIE3 · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 6, column 16 |
|---|
| Configuration: PIDC | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: STRING; Gene selection: TFs+500 Dataset subset: MHSC-GM | 8.36 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePIDC · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 6, column 6 |
|---|
| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: STRING; Gene selection: TFs+500 Dataset subset: MHSC-GM | 7.96 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 6, column 8 |
|---|
| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: MHSC-GM | 1.03 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 16, column 8 |
|---|
| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: STRING; Gene selection: TFs+500 Dataset subset: MHSC-GM | 1.89 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 6, column 10 |
|---|
| Configuration: GENIE3 | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: MHSC-GM | 1.05 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGENIE3 · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 16, column 7 |
|---|
| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: MHSC-GM | 0 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 6, column 20 |
|---|
| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: MHSC-GM | 1.03 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 16, column 17 |
|---|
| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: MHSC-GM | 1.29 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 11, column 18 |
|---|
| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: MHSC-GM | 1.34 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 11, column 11 |
|---|
| Configuration: PIDC | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: MHSC-GM | 6.64 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePIDC · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 11, column 6 |
|---|
| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: MHSC-GM | 1.24 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 6, column 19 |
|---|
| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: MHSC-GM | 0 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 11, column 20 |
|---|
| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: MHSC-GM | 1.24 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 6, column 18 |
|---|
| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: MHSC-GM | 1.04 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 16, column 11 |
|---|
| Configuration: GENIE3 | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: STRING; Gene selection: TFs+500 Dataset subset: MHSC-GM | 8.7 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGENIE3 · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 6, column 7 |
|---|
| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: MHSC-GM | 1.97 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 11, column 10 |
|---|
| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: MHSC-GM | 6.02 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 11, column 8 |
|---|
| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · MHSC-GM · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: MHSC-GM | 1.08 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · MHSC-GM BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 16, column 18 |
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