| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hESC | 1.23 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 22, column 10 |
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| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: hESC | 0.68 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 20, column 20 |
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| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hESC | 1.02 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 22, column 9 |
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| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hESC | 1.56 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 22, column 17 |
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| Configuration: PIDC | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: hESC | 4.12 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePIDC · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 20, column 15 |
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| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hESC | 1.06 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 24, column 10 |
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| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: STRING; Gene selection: TFs+500 Dataset subset: hESC | 1.41 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 20, column 9 |
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| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hESC | 0.93 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 24, column 17 |
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| Configuration: GENIE3 | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hESC | 1.8 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGENIE3 · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 22, column 7 |
|---|
| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hESC | 1.69 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 24, column 20 |
|---|
| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: hESC | 1.28 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 20, column 19 |
|---|
| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hESC | 0 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 24, column 11 |
|---|
| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hESC | 1.47 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 24, column 18 |
|---|
| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hESC | 1.38 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 22, column 19 |
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| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: STRING; Gene selection: TFs+500 Dataset subset: hESC | 3.08 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 20, column 8 |
|---|
| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hESC | 1.02 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 24, column 9 |
|---|
| Configuration: PIDC | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hESC | 0.91 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePIDC · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 24, column 6 |
|---|
| Configuration: GENIE3 | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hESC | 0.95 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGENIE3 · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 24, column 7 |
|---|
| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: hESC | 3.45 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 20, column 17 |
|---|
| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hESC | 0 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 22, column 11 |
|---|
| Configuration: GENIE3 | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: hESC | 3.66 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGENIE3 · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 20, column 16 |
|---|
| Configuration: PIDC | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hESC | 2.11 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePIDC · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 22, column 15 |
|---|
| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hESC | 0.93 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 24, column 8 |
|---|
| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: hESC | 1.06 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 20, column 18 |
|---|
| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · hESC · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hESC | 1.14 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · hESC BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 24, column 19 |
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