| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hHep | 1.7 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 23, column 8 |
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| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hHep | 0.93 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 25, column 20 |
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| Configuration: PIDC | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: hHep | 3.63 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePIDC · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 21, column 15 |
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| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hHep | 0.99 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 25, column 18 |
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| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: hHep | 0.81 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 21, column 18 |
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| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hHep | 1.02 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 25, column 17 |
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| Configuration: GENIE3 | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: hHep | 3.2 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGENIE3 · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 21, column 16 |
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| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hHep | 1.04 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 23, column 10 |
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| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hHep | 1.3 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 23, column 19 |
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| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hHep | 1.05 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 25, column 11 |
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| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hHep | 1.17 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 25, column 9 |
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| Configuration: PIDC | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hHep | 2.44 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePIDC · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 23, column 15 |
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| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hHep | 2.29 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 23, column 9 |
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| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: hHep | 0.96 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 21, column 20 |
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| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: STRING; Gene selection: TFs+500 Dataset subset: hHep | 0.82 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 21, column 10 |
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| Configuration: PIDC | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: STRING; Gene selection: TFs+500 Dataset subset: hHep | 3.5 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePIDC · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 21, column 6 |
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| Configuration: GENIE3 | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hHep | 1.12 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGENIE3 · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 25, column 16 |
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| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hHep | 1.73 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 23, column 17 |
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| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hHep | 1.96 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 23, column 20 |
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| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: STRING; Gene selection: TFs+500 Dataset subset: hHep | 2.84 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 21, column 8 |
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| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: STRING; Gene selection: TFs+500 Dataset subset: hHep | 1.34 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 21, column 11 |
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| Configuration: PIDC | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hHep | 2.48 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePIDC · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 23, column 6 |
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| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: hHep | 0.98 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 25, column 10 |
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| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: hHep | 2.82 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 21, column 17 |
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| Configuration: PIDC | Protocol: BEELINE 2020 Figure 5 · hHep · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: hHep | 1.01 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePIDC · BEELINE 2020 Figure 5 · hHep BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 25, column 15 |
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