| Configuration: GENIE3 | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: mHSC-E | 4.65 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGENIE3 · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 9, column 16 |
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| Configuration: GENIE3 | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: mHSC-E | 6.99 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGENIE3 · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 4, column 16 |
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| Configuration: PIDC | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: mHSC-E | 5.74 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePIDC · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 9, column 15 |
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| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: mHSC-E | 0.99 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 14, column 9 |
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| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: STRING; Gene selection: TFs+500 Dataset subset: mHSC-E | 6.05 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 4, column 8 |
|---|
| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: mHSC-E | 0 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 9, column 19 |
|---|
| Configuration: GENIE3 | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: mHSC-E | 1.02 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGENIE3 · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 14, column 16 |
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| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: STRING; Gene selection: TFs+500 Dataset subset: mHSC-E | 0.74 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 4, column 11 |
|---|
| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: mHSC-E | 4.2 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 4, column 18 |
|---|
| Configuration: PIDC | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: mHSC-E | 0.98 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePIDC · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 14, column 6 |
|---|
| Configuration: GENIE3 | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: mHSC-E | 1.03 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGENIE3 · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 14, column 7 |
|---|
| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: mHSC-E | 0 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 14, column 19 |
|---|
| Configuration: SCODE | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: mHSC-E | 1 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSCODE · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 14, column 18 |
|---|
| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: mHSC-E | 0 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 9, column 20 |
|---|
| Configuration: PIDC | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: mHSC-E | 5.41 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePIDC · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 9, column 6 |
|---|
| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: mHSC-E | 1.04 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 14, column 11 |
|---|
| Configuration: PIDC | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: mHSC-E | 8.08 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePIDC · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 4, column 15 |
|---|
| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: STRING; Gene selection: TFs+500 Dataset subset: mHSC-E | 1.56 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 4, column 10 |
|---|
| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: mHSC-E | 4.65 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 9, column 17 |
|---|
| Configuration: GRNBOOST2 | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: mHSC-E | 4.55 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceGRNBOOST2 · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 9, column 8 |
|---|
| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: mHSC-E | 1.1 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 14, column 10 |
|---|
| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: mHSC-E | 0.95 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 9, column 11 |
|---|
| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: STRING; Gene selection: TFs+1000 Dataset subset: mHSC-E | 0 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 4, column 19 |
|---|
| Configuration: SINCERITIES | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Cell-type specific ChIP-Seq; Gene selection: TFs+1000 Dataset subset: mHSC-E | 0 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSINCERITIES · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 14, column 20 |
|---|
| Configuration: PPCOR | Protocol: BEELINE 2020 Figure 5 · mHSC-E · Reference network: Non-specific ChIP-Seq; Gene selection: TFs+500 Dataset subset: mHSC-E | 1.57 Early Precision Ratio ratio · higher Uncertainty: status: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePPCOR · BEELINE 2020 Figure 5 · mHSC-E BEELINE 2020 Figure 5 Aggregation: unreported BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 9, column 10 |
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