Dataset used by the historical TAPE leaderboard.
10 evaluations · 10 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Model: TAPE Bepler | Task: TAPE Stability Dataset: TAPE Stability source dataset | 0.64 Spearman unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceTAPE Stability Bepler leaderboard evaluation Test 17 one-mutation neighbourhoods around candidate proteins; train on broad experimental design rounds Aggregation: Not reported songlab-cal/tape official source; tape primary benchmark evidence · README.md > Leaderboard > Stability; row Bepler; column Spearman's rho |
| Model: TAPE LSTM | Task: TAPE Stability Dataset: TAPE Stability source dataset | 0.69 Spearman unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceTAPE Stability LSTM leaderboard evaluation Test 17 one-mutation neighbourhoods around candidate proteins; train on broad experimental design rounds Aggregation: Not reported songlab-cal/tape official source; tape primary benchmark evidence · README.md > Leaderboard > Stability; row LSTM; column Spearman's rho |
| Method: TAPE One Hot | Task: TAPE Stability Dataset: TAPE Stability source dataset | 0.19 Spearman unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceTAPE Stability One Hot leaderboard evaluation Test 17 one-mutation neighbourhoods around candidate proteins; train on broad experimental design rounds Aggregation: Not reported songlab-cal/tape official source; tape primary benchmark evidence · README.md > Leaderboard > Stability; row One Hot; column Spearman's rho |
| Model: TAPE ResNet | Task: TAPE Stability Dataset: TAPE Stability source dataset | 0.73 Spearman unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceTAPE Stability ResNet leaderboard evaluation Test 17 one-mutation neighbourhoods around candidate proteins; train on broad experimental design rounds Aggregation: Not reported songlab-cal/tape official source; tape primary benchmark evidence · README.md > Leaderboard > Stability; row ResNet; column Spearman's rho |
| Model: TAPE Transformer | Task: TAPE Stability Dataset: TAPE Stability source dataset | 0.73 Spearman unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceTAPE Stability Transformer leaderboard evaluation Test 17 one-mutation neighbourhoods around candidate proteins; train on broad experimental design rounds Aggregation: Not reported songlab-cal/tape official source; tape primary benchmark evidence · README.md > Leaderboard > Stability; row Transformer; column Spearman's rho |
| Model: TAPE Unirep | Task: TAPE Stability Dataset: TAPE Stability source dataset | 0.73 Spearman unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceTAPE Stability Unirep leaderboard evaluation Test 17 one-mutation neighbourhoods around candidate proteins; train on broad experimental design rounds Aggregation: Not reported songlab-cal/tape official source; tape primary benchmark evidence · README.md > Leaderboard > Stability; row Unirep; column Spearman's rho |
| Configuration: Alignment | Task: TAPE Stability Dataset: TAPE Stability source dataset | N/A Spearman unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAlignment: Rocklin designed-protein stability Test 17 one-mutation neighbourhoods around candidate proteins; train on broad experimental design rounds Aggregation: Not reported tape primary benchmark evidence · Table2,p.7,row10(Task-specific alignment/HMM baseline/Alignment),columnStability |
| Configuration: LSTM (no pretraining) | Task: TAPE Stability Dataset: TAPE Stability source dataset | 0.28 Spearman unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceLSTM (no pretraining): Rocklin designed-protein stability Test 17 one-mutation neighbourhoods around candidate proteins; train on broad experimental design rounds Aggregation: Not reported tape primary benchmark evidence · Table2,p.7,row2(No pretraining/LSTM),columnStability |
| Configuration: Transformer (no pretraining) | Task: TAPE Stability Dataset: TAPE Stability source dataset | -0.06 Spearman unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceTransformer (no pretraining): Rocklin designed-protein stability Test 17 one-mutation neighbourhoods around candidate proteins; train on broad experimental design rounds Aggregation: Not reported tape primary benchmark evidence · Table2,p.7,row1(No pretraining/Transformer),columnStability |
| Configuration: ResNet (no pretraining) | Task: TAPE Stability Dataset: TAPE Stability source dataset | 0.61 Spearman unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceResNet (no pretraining): Rocklin designed-protein stability Test 17 one-mutation neighbourhoods around candidate proteins; train on broad experimental design rounds Aggregation: Not reported tape primary benchmark evidence · Table2,p.7,row3(No pretraining/ResNet),columnStability |
Source checking is not independent reproduction. Release 2026-11-02-a7f03c9e55a5.
0 of 4 readiness checks met. These checks assess whether the evidence supports a reproducible investigation; a source-checked score alone does not meet them.
Release 2026-11-02-a7f03c9e55a5 · Evidence verified: Not verified
Exact outcomes, predictions, identifiers and evaluator are connected.
Missing or unresolved evidence
Verified: Not verified
Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.
Missing or unresolved evidence
Verified: Not verified
A pinned recipe describes the inputs, environment and resource requirements.
Missing or unresolved evidence
Verified: Not verified
Separate data and exposure records support an independent test.
Missing or unresolved evidence
Verified: Not verified
Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.
No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.
A dataset supplies biological observations. The evaluation protocol defines how those observations are split, used and scored.
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
4 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Description Dataset used by the historical TAPE leaderboard. Context-only references | tape primary benchmark evidence No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 1906.08230v1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Description Dataset used by the historical TAPE leaderboard. Context-only references | songlab-cal/tape official source No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 6d345c2b2bbf52cd32cf179325c222afd92aec7e | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Name TAPE Stability source dataset Context-only references | tape primary benchmark evidence No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 1906.08230v1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Name TAPE Stability source dataset Context-only references | songlab-cal/tape official source No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 6d345c2b2bbf52cd32cf179325c222afd92aec7e | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Release 2026-11-02-a7f03c9e55a5 · Record review: discovered
Stable ID: discovery-dataset-tape-stability-source-dataset