rewirebio.iobenchmarks
Configuration

NTv3-8m-pre (1% eval (evaluated with 1% of the training set), GUANinE v1.1)

NTv3-8m-pre (1% eval (evaluated with 1% of the training set), GUANinE v1.1), a configuration of Nucleotide Transformer v3: Regime U (unsupervised pretraining); evaluation 1% eval (evaluated with 1% of the training set); context column '≈32.8k'.

1 evaluation · 1 result

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Configuration: NTv3-8m-pre (1% eval (evaluated with 1% of the training set), GUANinE v1.1)Protocol: GUANinE v1.1 cadd-snv, Spearman rho x100 (Table 3)
Dataset: GUANinE cadd-snv test set
19.5 Spearman (GUANinE v1.1 test set)
unitless · higher

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

NTv3-8m-pre on GUANinE cadd-snv

lit-genomics-20261011-guanine-protocol-cadd-snv

Aggregation: Not reported

GUANinE v1.1 reveals complementarity of supervised and genomic language models · Table 3, row 'NTv3-8m-pre', column 'cadd-snv' (ρ)

Source checking is not independent reproduction. Release 2026-10-22-1b7cf027e4f6.

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Claims, original sources and review scope · Release 2026-10-22-1b7cf027e4f6
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Release 2026-10-22-1b7cf027e4f6 · Record review: source checked

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Stable ID: lit-genomics-20261011-guanine-config-ntv3-8m-pre-1pct

areas
dna-genomes
contexts
research
method types
foundation_model
reported name
NTv3-8m-pre
foundation model eligible
true
parameters
Regime U (unsupervised pretraining); evaluation 1% eval (evaluated with 1% of the training set); context column '≈32.8k'
source locator
Table 3 row 'NTv3-8m-pre', columns Reg., Eval. and Context
access reuse
Not stated in the source; see the model's own release
missing metadata
version: reason: unreported; note: Only the printed row label identifies the checkpoint
provenance note
NTv3-8m-pre as evaluated in GUANinE v1.1.
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