Hu et al. 2026 Supplemental Tables S1 to S4, S6 and S7 (spectrum.03993-25-s0001.docx)
Microbiology Spectrum · 2026 · spectrum.03993-25-s0001.docx as distributed with PMC13339908 · Peer-reviewed
What this source contributed
Records in this release that cite this source. A record can cite several sources.
Results
Values as the source printed them. Compare results only under compatible protocols, datasets and metrics.
Claims
Statements this source supports, each with where in the source it was checked.
- Relevance of organism-level agreement with clinical microbiological tests (CMT), 62 BALF specimens (Hu et al. 2026) to "Select a DNA pathogen-identification workflow for diagnostic testing": Assessed by Organism-level agreement with clinical microbiological tests (CMT), 62 BALF specimens (Hu et al. 2026) (dna-pathogen-20261011-hu2026-source: Table 2; dna-pathogen-20261011-hu2026-source-supp: Supplemental Tables S6 and S7)
- Relevance of organism-level agreement with composite reference standard (CRS), 62 BALF specimens (Hu et al. 2026) to "Select a DNA pathogen-identification workflow for diagnostic testing": Assessed by Organism-level agreement with composite reference standard (CRS), 62 BALF specimens (Hu et al. 2026) (dna-pathogen-20261011-hu2026-source: Table 2; dna-pathogen-20261011-hu2026-source-supp: Supplemental Tables S6 and S7)
- Relevance of organism-level agreement with routine culture, 62 BALF specimens (Hu et al. 2026) to "Select a DNA pathogen-identification workflow for diagnostic testing": Assessed by Organism-level agreement with routine culture, 62 BALF specimens (Hu et al. 2026) (dna-pathogen-20261011-hu2026-source: Table 2; dna-pathogen-20261011-hu2026-source-supp: Supplemental Tables S6 and S7)
Models, benchmarks and other records
Protocols (3)
Evaluations (6)
- Host-depleted ONT GridION mNGS workflow (Hu et al. 2026) against clinical microbiological tests (CMT)
- Host-depleted ONT GridION mNGS workflow (Hu et al. 2026) against composite reference standard (CRS)
- Host-depleted ONT GridION mNGS workflow (Hu et al. 2026) against routine culture
- MGISEQ-200 short-read mNGS workflow (Hu et al. 2026) against clinical microbiological tests (CMT)
- MGISEQ-200 short-read mNGS workflow (Hu et al. 2026) against composite reference standard (CRS)
- MGISEQ-200 short-read mNGS workflow (Hu et al. 2026) against routine culture
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
21 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.artifact_sha256 7ab6c2cde30619e506a5e015ef5bbb253dfa6359ebd56140577eef136b153ed9 Source metadata | Hu et al. 2026 Supplemental Tables S1 to S4, S6 and S7 (spectrum.03993-25-s0001.docx) No field-specific location recorded Version: spectrum.03993-25-s0001.docx as distributed with PMC13339908 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Artifact url https://www.ebi.ac.uk/europepmc/webservices/rest/PMC13339908/supplementaryFiles Source metadata | Hu et al. 2026 Supplemental Tables S1 to S4, S6 and S7 (spectrum.03993-25-s0001.docx) No field-specific location recorded Version: spectrum.03993-25-s0001.docx as distributed with PMC13339908 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Doi 10.1128/spectrum.03993-25 Source metadata | Hu et al. 2026 Supplemental Tables S1 to S4, S6 and S7 (spectrum.03993-25-s0001.docx) No field-specific location recorded Version: spectrum.03993-25-s0001.docx as distributed with PMC13339908 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Licence CC-BY-4.0 Source metadata | Hu et al. 2026 Supplemental Tables S1 to S4, S6 and S7 (spectrum.03993-25-s0001.docx) No field-specific location recorded Version: spectrum.03993-25-s0001.docx as distributed with PMC13339908 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Media type application/vnd.openxmlformats-officedocument.wordprocessingml.document Source metadata | Hu et al. 2026 Supplemental Tables S1 to S4, S6 and S7 (spectrum.03993-25-s0001.docx) No field-specific location recorded Version: spectrum.03993-25-s0001.docx as distributed with PMC13339908 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Publication status peer_reviewed Source metadata | Hu et al. 2026 Supplemental Tables S1 to S4, S6 and S7 (spectrum.03993-25-s0001.docx) No field-specific location recorded Version: spectrum.03993-25-s0001.docx as distributed with PMC13339908 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Retrieval note Europe PMC returns the supplementary files as a ZIP that is rebuilt on each request, so the ZIP hash changes between downloads; artifact_sha256 is the hash of the DOCX member, which was the same in two downloads. Source metadata | Hu et al. 2026 Supplemental Tables S1 to S4, S6 and S7 (spectrum.03993-25-s0001.docx) No field-specific location recorded Version: spectrum.03993-25-s0001.docx as distributed with PMC13339908 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Retrieved at 2026-10-11T21:41:40Z Source metadata | Hu et al. 2026 Supplemental Tables S1 to S4, S6 and S7 (spectrum.03993-25-s0001.docx) No field-specific location recorded Version: spectrum.03993-25-s0001.docx as distributed with PMC13339908 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Source location Article XML <supplementary-material> 'Supplemental tables spectrum.03993-25-s0001.docx Tables S1 to S4, S6 and S7'; licence as for the article Source metadata | Hu et al. 2026 Supplemental Tables S1 to S4, S6 and S7 (spectrum.03993-25-s0001.docx) No field-specific location recorded Version: spectrum.03993-25-s0001.docx as distributed with PMC13339908 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Url https://doi.org/10.1128/spectrum.03993-25 Source metadata | Hu et al. 2026 Supplemental Tables S1 to S4, S6 and S7 (spectrum.03993-25-s0001.docx) No field-specific location recorded Version: spectrum.03993-25-s0001.docx as distributed with PMC13339908 | catalogued No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Sources and history
Release 2026-10-22-1b7cf027e4f6 · Record review: source checked
Supplementary file of the primary source, retrieved and hashed for the 2026-10-11 DNA pathogen-identification literature pass.
Technical metadata and extraction receipts
Stable ID: dna-pathogen-20261011-hu2026-source-supp
- areas
- microbes-communities
- contexts
- clinical_research
- url
- https://doi.org/10.1128/spectrum.03993-25
- artifact url
- https://www.ebi.ac.uk/europepmc/webservices/rest/PMC13339908/supplementaryFiles
- version
- spectrum.03993-25-s0001.docx as distributed with PMC13339908
- retrieved at
- 2026-10-11T21:41:40Z
- artifact sha256
- 7ab6c2cde30619e506a5e015ef5bbb253dfa6359ebd56140577eef136b153ed9
- doi
- 10.1128/spectrum.03993-25
- publication status
- peer_reviewed
- licence
- CC-BY-4.0
- media type
- application/vnd.openxmlformats-officedocument.wordprocessingml.document
- venue
- Microbiology Spectrum
- year
- 2026
- retrieval note
- Europe PMC returns the supplementary files as a ZIP that is rebuilt on each request, so the ZIP hash changes between downloads; artifact_sha256 is the hash of the DOCX member, which was the same in two downloads.
- source locator
- Article XML <supplementary-material> 'Supplemental tables spectrum.03993-25-s0001.docx Tables S1 to S4, S6 and S7'; licence as for the article