rewirebio.iobenchmarks
Source

BEELINE: 10.1038/s41592-019-0690-6 source data published 2020

10.1038/s41592-019-0690-6 source data published 2020

Original source

What this source contributed

Records in this release that cite this source. A record can cite several sources.

Results

Values as the source printed them. Compare results only under compatible protocols, datasets and metrics.

Model or configurationMetricValueDatasetEvaluation
GENIE3AUPRC ratio1.252627651 unitlessGSDGENIE3 · BEELINE 2020 Figure 4 · GSD
GENIE3Early precision ratio1.509868421 unitlessGSDGENIE3 · BEELINE 2020 Figure 4 · GSD
GENIE3Early precision ratio (activating edges only)2.099125364 unitlessGSDGENIE3 · BEELINE 2020 Figure 4 · GSD
GENIE3Early precision ratio (inhibitory edges only)0.401920439 unitlessGSDGENIE3 · BEELINE 2020 Figure 4 · GSD
GENIE3AUPRC ratio1.992588587 unitlessHSCGENIE3 · BEELINE 2020 Figure 4 · HSC
GENIE3Early precision ratio1.952662722 unitlessHSCGENIE3 · BEELINE 2020 Figure 4 · HSC
GENIE3Early precision ratio (activating edges only)2.355371901 unitlessHSCGENIE3 · BEELINE 2020 Figure 4 · HSC
GENIE3Early precision ratio (inhibitory edges only)2.64 unitlessHSCGENIE3 · BEELINE 2020 Figure 4 · HSC
GENIE3AUPRC ratio0.795125088 unitlessmCADGENIE3 · BEELINE 2020 Figure 4 · mCAD
GENIE3Early precision ratio0.946745562 unitlessmCADGENIE3 · BEELINE 2020 Figure 4 · mCAD
GENIE3Early precision ratio (activating edges only)0.6875 unitlessmCADGENIE3 · BEELINE 2020 Figure 4 · mCAD
GENIE3Early precision ratio (inhibitory edges only)0.790123457 unitlessmCADGENIE3 · BEELINE 2020 Figure 4 · mCAD
GENIE3AUPRC ratio2.756376658 unitlessVSCGENIE3 · BEELINE 2020 Figure 4 · VSC
GENIE3Early precision ratio2.488888889 unitlessVSCGENIE3 · BEELINE 2020 Figure 4 · VSC
GENIE3Early precision ratio (inhibitory edges only)2.488888889 unitlessVSCGENIE3 · BEELINE 2020 Figure 4 · VSC
GRISLIAUPRC ratio1.367750246 unitlessGSDGRISLI · BEELINE 2020 Figure 4 · GSD
GRISLIEarly precision ratio1.264952153 unitlessGSDGRISLI · BEELINE 2020 Figure 4 · GSD
GRISLIEarly precision ratio (activating edges only)1.443148688 unitlessGSDGRISLI · BEELINE 2020 Figure 4 · GSD
GRISLIEarly precision ratio (inhibitory edges only)0.983269645 unitlessGSDGRISLI · BEELINE 2020 Figure 4 · GSD
GRISLIAUPRC ratio0.958030721 unitlessHSCGRISLI · BEELINE 2020 Figure 4 · HSC
GRISLIEarly precision ratio0.94017094 unitlessHSCGRISLI · BEELINE 2020 Figure 4 · HSC
GRISLIEarly precision ratio (activating edges only)0.785123967 unitlessHSCGRISLI · BEELINE 2020 Figure 4 · HSC
GRISLIEarly precision ratio (inhibitory edges only)0.608235294 unitlessHSCGRISLI · BEELINE 2020 Figure 4 · HSC
GRISLIAUPRC ratio1.306747097 unitlessmCADGRISLI · BEELINE 2020 Figure 4 · mCAD
GRISLIEarly precision ratio1.065088757 unitlessmCADGRISLI · BEELINE 2020 Figure 4 · mCAD
GRISLIEarly precision ratio (activating edges only)0.6875 unitlessmCADGRISLI · BEELINE 2020 Figure 4 · mCAD
GRISLIEarly precision ratio (inhibitory edges only)1.382716049 unitlessmCADGRISLI · BEELINE 2020 Figure 4 · mCAD
GRISLIAUPRC ratio1.22323479 unitlessVSCGRISLI · BEELINE 2020 Figure 4 · VSC
GRISLIEarly precision ratio1.132352941 unitlessVSCGRISLI · BEELINE 2020 Figure 4 · VSC
GRISLIEarly precision ratio (inhibitory edges only)1.132352941 unitlessVSCGRISLI · BEELINE 2020 Figure 4 · VSC
GRNBOOST2AUPRC ratio1.258403675 unitlessGSDGRNBOOST2 · BEELINE 2020 Figure 4 · GSD
GRNBOOST2Early precision ratio1.450657895 unitlessGSDGRNBOOST2 · BEELINE 2020 Figure 4 · GSD
GRNBOOST2Early precision ratio (activating edges only)1.967930029 unitlessGSDGRNBOOST2 · BEELINE 2020 Figure 4 · GSD
GRNBOOST2Early precision ratio (inhibitory edges only)0.401920439 unitlessGSDGRNBOOST2 · BEELINE 2020 Figure 4 · GSD
GRNBOOST2AUPRC ratio1.932560909 unitlessHSCGRNBOOST2 · BEELINE 2020 Figure 4 · HSC
GRNBOOST2Early precision ratio1.952662722 unitlessHSCGRNBOOST2 · BEELINE 2020 Figure 4 · HSC
GRNBOOST2Early precision ratio (activating edges only)2.355371901 unitlessHSCGRNBOOST2 · BEELINE 2020 Figure 4 · HSC
GRNBOOST2Early precision ratio (inhibitory edges only)2.2 unitlessHSCGRNBOOST2 · BEELINE 2020 Figure 4 · HSC
GRNBOOST2AUPRC ratio0.771425082 unitlessmCADGRNBOOST2 · BEELINE 2020 Figure 4 · mCAD
GRNBOOST2Early precision ratio0.946745562 unitlessmCADGRNBOOST2 · BEELINE 2020 Figure 4 · mCAD
GRNBOOST2Early precision ratio (activating edges only)0 unitlessmCADGRNBOOST2 · BEELINE 2020 Figure 4 · mCAD
GRNBOOST2Early precision ratio (inhibitory edges only)0.790123457 unitlessmCADGRNBOOST2 · BEELINE 2020 Figure 4 · mCAD
GRNBOOST2AUPRC ratio2.681333463 unitlessVSCGRNBOOST2 · BEELINE 2020 Figure 4 · VSC
GRNBOOST2Early precision ratio2.737777778 unitlessVSCGRNBOOST2 · BEELINE 2020 Figure 4 · VSC
GRNBOOST2Early precision ratio (inhibitory edges only)2.737777778 unitlessVSCGRNBOOST2 · BEELINE 2020 Figure 4 · VSC
GRNVBEMAUPRC ratio1.28426324 unitlessGSDGRNVBEM · BEELINE 2020 Figure 4 · GSD
GRNVBEMEarly precision ratio1.391447368 unitlessGSDGRNVBEM · BEELINE 2020 Figure 4 · GSD
GRNVBEMEarly precision ratio (activating edges only)1.771137026 unitlessGSDGRNVBEM · BEELINE 2020 Figure 4 · GSD
GRNVBEMEarly precision ratio (inhibitory edges only)0.735930183 unitlessGSDGRNVBEM · BEELINE 2020 Figure 4 · GSD
GRNVBEMAUPRC ratio1.318115809 unitlessHSCGRNVBEM · BEELINE 2020 Figure 4 · HSC

Claims

Statements this source supports, each with where in the source it was checked.

Models, benchmarks and other records

Configurations (12)

Protocols (4)

Dataset subsets (4)

Evaluations (48)

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

14 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statementOriginal source and locationReview and provenance
Access and reuse
See original publisher or repository; no blanket licence inferred.
Source metadata
BEELINE: 10.1038/s41592-019-0690-6 source data published 2020

Original source ↗

No field-specific location recorded

Version: 10.1038/s41592-019-0690-6 source data published 2020
Retrieved: 2026-09-19

catalogued

No individual claim review recorded

Audit details

Field: attributes.access_and_reuse

Source artifact SHA-256: 3582523c27176f7573e62fc3fa11843076568b9ce522e556cd2a6973029c90cb

Hash scope: Exact downloaded bytes, before optional gzip storage

Inspected artifact

Artifact SHA-256
3582523c27176f7573e62fc3fa11843076568b9ce522e556cd2a6973029c90cb
Source metadata
BEELINE: 10.1038/s41592-019-0690-6 source data published 2020

Original source ↗

No field-specific location recorded

Version: 10.1038/s41592-019-0690-6 source data published 2020
Retrieved: 2026-09-19

catalogued

No individual claim review recorded

Audit details

Field: attributes.artifact_sha256

Source artifact SHA-256: 3582523c27176f7573e62fc3fa11843076568b9ce522e556cd2a6973029c90cb

Hash scope: Exact downloaded bytes, before optional gzip storage

Inspected artifact

Artifact url
https://media.springernature.com/original/springer-static/esm/art%3A10.1038%2Fs41592-019-0690-6/MediaObjects/41592_2019_690_MOESM13_ESM.csv
Source metadata
BEELINE: 10.1038/s41592-019-0690-6 source data published 2020

Original source ↗

No field-specific location recorded

Version: 10.1038/s41592-019-0690-6 source data published 2020
Retrieved: 2026-09-19

catalogued

No individual claim review recorded

Audit details

Field: attributes.artifact_url

Source artifact SHA-256: 3582523c27176f7573e62fc3fa11843076568b9ce522e556cd2a6973029c90cb

Hash scope: Exact downloaded bytes, before optional gzip storage

Inspected artifact

Hash scope
Exact downloaded bytes, before optional gzip storage
Source metadata
BEELINE: 10.1038/s41592-019-0690-6 source data published 2020

Original source ↗

No field-specific location recorded

Version: 10.1038/s41592-019-0690-6 source data published 2020
Retrieved: 2026-09-19

catalogued

No individual claim review recorded

Audit details

Field: attributes.hash_scope

Source artifact SHA-256: 3582523c27176f7573e62fc3fa11843076568b9ce522e556cd2a6973029c90cb

Hash scope: Exact downloaded bytes, before optional gzip storage

Inspected artifact

Retrieved at
2026-09-19
Source metadata
BEELINE: 10.1038/s41592-019-0690-6 source data published 2020

Original source ↗

No field-specific location recorded

Version: 10.1038/s41592-019-0690-6 source data published 2020
Retrieved: 2026-09-19

catalogued

No individual claim review recorded

Audit details

Field: attributes.retrieved_at

Source artifact SHA-256: 3582523c27176f7573e62fc3fa11843076568b9ce522e556cd2a6973029c90cb

Hash scope: Exact downloaded bytes, before optional gzip storage

Inspected artifact

Url
https://media.springernature.com/original/springer-static/esm/art%3A10.1038%2Fs41592-019-0690-6/MediaObjects/41592_2019_690_MOESM13_ESM.csv
Source metadata
BEELINE: 10.1038/s41592-019-0690-6 source data published 2020

Original source ↗

No field-specific location recorded

Version: 10.1038/s41592-019-0690-6 source data published 2020
Retrieved: 2026-09-19

catalogued

No individual claim review recorded

Audit details

Field: attributes.url

Source artifact SHA-256: 3582523c27176f7573e62fc3fa11843076568b9ce522e556cd2a6973029c90cb

Hash scope: Exact downloaded bytes, before optional gzip storage

Inspected artifact

Version
10.1038/s41592-019-0690-6 source data published 2020
Source metadata
BEELINE: 10.1038/s41592-019-0690-6 source data published 2020

Original source ↗

No field-specific location recorded

Version: 10.1038/s41592-019-0690-6 source data published 2020
Retrieved: 2026-09-19

catalogued

No individual claim review recorded

Audit details

Field: attributes.version

Source artifact SHA-256: 3582523c27176f7573e62fc3fa11843076568b9ce522e556cd2a6973029c90cb

Hash scope: Exact downloaded bytes, before optional gzip storage

Inspected artifact

Description
Primary source artifact; cited cells checked separately from scientific interpretation.
Source metadata
BEELINE: 10.1038/s41592-019-0690-6 source data published 2020

Original source ↗

No field-specific location recorded

Version: 10.1038/s41592-019-0690-6 source data published 2020
Retrieved: 2026-09-19

catalogued

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: 3582523c27176f7573e62fc3fa11843076568b9ce522e556cd2a6973029c90cb

Hash scope: Exact downloaded bytes, before optional gzip storage

Inspected artifact

Search facets
None recorded
Source metadata
BEELINE: 10.1038/s41592-019-0690-6 source data published 2020

Original source ↗

No field-specific location recorded

Version: 10.1038/s41592-019-0690-6 source data published 2020
Retrieved: 2026-09-19

catalogued

No individual claim review recorded

Audit details

Field: facets

Source artifact SHA-256: 3582523c27176f7573e62fc3fa11843076568b9ce522e556cd2a6973029c90cb

Hash scope: Exact downloaded bytes, before optional gzip storage

Inspected artifact

Record ID
acquired-source-3156602fda847ae943b4
Source metadata
BEELINE: 10.1038/s41592-019-0690-6 source data published 2020

Original source ↗

No field-specific location recorded

Version: 10.1038/s41592-019-0690-6 source data published 2020
Retrieved: 2026-09-19

catalogued

No individual claim review recorded

Audit details

Field: id

Source artifact SHA-256: 3582523c27176f7573e62fc3fa11843076568b9ce522e556cd2a6973029c90cb

Hash scope: Exact downloaded bytes, before optional gzip storage

Inspected artifact

How to read the evidence

Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

Primary source artifact; cited cells checked separately from scientific interpretation.

Release history

No supporting source is linked yet.

Read original source

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Technical metadata and extraction receipts

Stable ID: acquired-source-3156602fda847ae943b4

url
https://media.springernature.com/original/springer-static/esm/art%3A10.1038%2Fs41592-019-0690-6/MediaObjects/41592_2019_690_MOESM13_ESM.csv
artifact url
https://media.springernature.com/original/springer-static/esm/art%3A10.1038%2Fs41592-019-0690-6/MediaObjects/41592_2019_690_MOESM13_ESM.csv
version
10.1038/s41592-019-0690-6 source data published 2020
retrieved at
2026-09-19
artifact sha256
3582523c27176f7573e62fc3fa11843076568b9ce522e556cd2a6973029c90cb
hash scope
Exact downloaded bytes, before optional gzip storage
access and reuse
See original publisher or repository; no blanket licence inferred.
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