rewirebio.iobenchmarks
Result

F1 of PLM-CLA on Clathrin independent test: selected-embedding classifiers

0.949 F1

Methods

Tested configuration
PLM-CLA
Protocol
Clathrin independent test: selected-embedding classifiers (clathrin protein classification)
Dataset
Clathrin independent test: selected-embedding classifiers
Procedure
Conventional classifiers and PLM-CLA compared using paper-selected features. CLA-IND 0.6 independent test from Shoombuatong 2024 dataset; source Table 1 carries cohort counts.
Evaluation
PLM-CLA: Clathrin independent test: selected-embedding classifiers
Coverage
Not reported scored / Not reported eligible
Uncertainty
Not reported by the source
Evidence
Author-reported evaluation · source checkedAdvancing the accuracy of clathrin protein prediction through multi-source protein language models · Table 3, row PLM-CLA, column F1; XML row14 column6

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.

Reproduction

Split
CLA-IND 0.6 independent test from Shoombuatong 2024 dataset; source Table 1 carries cohort counts.
Adaptation
Paper-specific evaluated pipeline; exact checkpoint not inferred from label
Scoring implementation
Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statementOriginal source and locationReview and provenance
Reported result
0.949
Individual claims
Advancing the accuracy of clathrin protein prediction through multi-source protein language models

Original source ↗

Table 3, row PLM-CLA, column F1; XML row14 column6

Version: journal full text in PMC
Retrieved: 2026-09-17T07:56:20.050842+00:00

source checked

["transcription","automated-source-review"] · 2026-09-17

author reported

Audit details

Source checked does not mean experimentally reproduced.

Field: attributes.printed_value

Source artifact SHA-256: 2edc86b25707c1b737d26117093ce8d856e79cc5d0b335f27c1c341f887f1c7e

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

1 source record and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: paper-result-2b3a797967cdef7a15

areas
proteins-complexes
tasks
clathrin protein classification
printed value
0.949
numeric value
0.949
metric
f1-score
metric direction
higher
unit
fraction
source locator
Table 3, row PLM-CLA, column F1; XML row14 column6
source occurrences
source id: part2-clathrin-plm-2025; locator: Table 3, row PLM-CLA, column F1; XML row14 column6
review
method: transcription; automated-source-review; date: 2026-09-17; note: Source checked does not mean experimentally reproduced.; method note: primary table; source review separate from transcription
missing metadata
checkpoint revision: reason: unextracted; eligible count: reason: unextracted; reported population: reason: unextracted; scored count: reason: unreported; uncertainty: reason: unreported
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