MCC of DNABERT-2 (further pre-trained on GUE) on GUE Core promoter detection, all (GUE split)
67.5 MCC
Methods
- Tested configuration
- DNABERT-2 (further pre-trained on GUE)
- Task
- GUE CORE-PROMOTER-DETECTION-ALL: Core promoter detection, dataset all
- Dataset subset
- GUE Core promoter detection, all (GUE split)
- Related family profiles
- DNABERT-2
- Procedure
- Fine-tuned on the GUE training split, scored on its test split. Split sizes are in Table 12.
- Evaluation
- DNABERT-2 (further pre-trained on GUE) on GUE CORE-PROMOTER-DETECTION-ALL: Core promoter detection, dataset all
- Coverage
- Not reported scored / Not reported eligible
- Uncertainty
- Not yet extracted
- Evidence
- Author-reported evaluation · source checkedDNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genomes · Table 6, row(DNABERT-2♦), column(Core promoter detection all)
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: source checked. Source checked does not mean independently reproduced.
Reproduction
- Split
- Not reported
- Adaptation
- Not reported
- Scoring implementation
- MCC
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
1 evidence row matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Reported result 67.50 Individual claims | DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genomes Table 6, row(DNABERT-2♦), column(Core promoter detection all) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | source checked ["pdf-text-parse"] · 2026-09-18 author reported Audit detailsSource checked, not reproduced. Metrics differ by task, so no composite score across tasks is computed or implied. Field: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. Extraction artifact SHA-256: |
Sources and history
Release 2026-11-02-a7f03c9e55a5 · Record review: source checked
1 source record and release history
- DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genomes · Original source · Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Technical metadata and extraction receipts
Stable ID: gue-result-dnabert-2-further-pre-trained-on-gue-core-promoter-detection-all-mcc
- areas
- dna-genomes
- tasks
- Core promoter detection, dataset all
- metric
- matthews-correlation-coefficient
- metric direction
- higher
- unit
- unitless
- printed value
- 67.50
- numeric value
- 67.50
- source locator
- Table 6, row(DNABERT-2♦), column(Core promoter detection all)
- missing metadata
- denominator: reason: unextracted; seeds: reason: unreported; uncertainty: reason: unextracted
- review
- method: pdf-text-parse; reviewer: codex; date: 2026-09-18; artifact sha256: 49300acee3e4afd44bebc3de9893c3bc310d331bd4805374e0952fdfbf366f06; retrieval url: https://arxiv.org/pdf/2306.15006; method note: pinned PDF text layer; every column heading asserted against the expected list; reviewer note: role: research agent; no human review claimed; note: Source checked, not reproduced. Metrics differ by task, so no composite score across tasks is computed or implied.
- unit detail
- printed x100