Result

0.919 AUC

2OMe-LM · AUC · human RNA 2OMe sites

Tested configuration: 2OMe-LM
Protocol: Human RNA 2OMe sites, five-fold cross-validation (human RNA 2-prime-O-methylation site prediction)
Dataset: human RNA 2OMe sites
Procedure: 41-nt centred RNA windows; balanced 8,037 positive and 8,037 negative samples after 80% identity filtering, then 8:2 train/test division. Average of five validation folds of the training set.
Evaluation: 2OMe-LM: human RNA 2-prime-O-methylation site prediction
Coverage: scored: unreported; eligible: unreported
Uncertainty: Not reported
Evidence: Author-reported evaluation · source checked2OMe-LM: predicting 2′-O-methylation sites in human RNA using a pre-trained RNA language model · Table 1, 2OMe-LM row, AUC column

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.

Reproduction

Split: 41-nt centred RNA windows; balanced 8,037 positive and 8,037 negative samples after 80% identity filtering, then 8:2 train/test division. Average of five validation folds of the training set.
Adaptation: Paper-specific predictor; checkpoint not specified
Scoring implementation: Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Access requirements and official instructions: Human RNA 2OMe sites, five-fold cross-validation (human RNA 2-prime-O-methylation site prediction)

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

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Evidence table

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2 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statement	Original source and location	Review and provenance
attributes.metric_direction higher Individual claims	2OMe-LM: predicting 2′-O-methylation sites in human RNA using a pre-trained RNA language model Original source ↗ Table 1. (btaf417-T1), row 8 2OMe-LM, column 6: Human RNA 2OMe sites, five-fold cross-validation AUC Version: journal full text in PMC Retrieved: 2026-09-16T10:33:38.332Z	source checked automated source review · 2026-09-17 author reported Audit details Field: `attributes.metric_direction` Claim: paper-claim-2c27d37dd8f94952df Source artifact SHA-256: `54fe4db6f35c03d0d4f3ef4da720eb26a832199372c56d0956609ff07af750ee` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
attributes.printed_value 0.919 Individual claims	2OMe-LM: predicting 2′-O-methylation sites in human RNA using a pre-trained RNA language model Original source ↗ Table 1, 2OMe-LM row, AUC column Version: journal full text in PMC Retrieved: 2026-09-16T10:33:38.332Z	source checked primary xml exact label cell check · 2026-09-16T10:33:38.332Z author reported Audit details Exact row/header labels and numeric cell matched. Check verifies transcription, not experimental correctness. Field: `attributes.printed_value` Claim: claim-b2-2ome-lm-2025 Source artifact SHA-256: `54fe4db6f35c03d0d4f3ef4da720eb26a832199372c56d0956609ff07af750ee` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact Extraction artifact SHA-256: `54fe4db6f35c03d0d4f3ef4da720eb26a832199372c56d0956609ff07af750ee` Extraction artifact

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Release 2026-09-29-06401fd5b220 · Record review: source checked

1 source records and release history

2OMe-LM: predicting 2′-O-methylation sites in human RNA using a pre-trained RNA language model · Original source · journal full text in PMC

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Technical metadata and extraction receipts

Stable ID: b2-2ome-lm-2025

areas: rna-transcriptomes
tasks: human RNA 2-prime-O-methylation site prediction
printed value: 0.919
numeric value: 0.919
metric: AUC
metric direction: higher
unit: fraction
uncertainty: Not reported
source locator: Table 1, 2OMe-LM row, AUC column
review: method: primary_xml_exact_label_cell_check; reviewer: rewire deterministic table checker v1; reviewed at: 2026-09-16T10:33:38.332Z; notes: Exact row/header labels and numeric cell matched. Check verifies transcription, not experimental correctness.; evidence: Table 1, 2OMe-LM row, AUC column; cell: 0.919; artifact sha256: 54fe4db6f35c03d0d4f3ef4da720eb26a832199372c56d0956609ff07af750ee; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12342186/fullTextXML
legacy id: b2-2ome-lm-2025
legacy row: id: b2-2ome-lm-2025; paper id: 2ome-lm-2025; domain id: rna-transcriptomes; task: human RNA 2-prime-O-methylation site prediction; model: 2OMe-LM; model version: not stated in table; dataset: human RNA 2OMe sites; dataset version: Not reported; split: 5-fold cross-validation; metric: AUC; value: 0.919; unit: fraction; uncertainty: Not reported; protocol: pretrained RNA language model predictor; source locator: Table 1, 2OMe-LM row, AUC column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC12342186/; evaluation origin: author_reported; reviewed utc: 2026-09-15T23:33:26Z
missing metadata: dataset version: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract

Related records

evaluation: 2OMe-LM: human RNA 2-prime-O-methylation site prediction
subject: Reported AUC for 2OMe-LM
subject: 2OMe-LM · AUC · human RNA 2OMe sites: attributes.metric_direction

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