ProGen3
Named prediction model family identified in the cited primary source. Exact fitted configurations and scores are separate records.
Overview
Named prediction model family identified in the cited primary source. Exact fitted configurations and scores are separate records.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluations and results
6 evaluations · 6 results. Different protocols are not a single leaderboard.
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Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: Progen3 112m [ProteinGym 144fe22b snapshot] | Protocol: ProteinGym AMFR official zero-shot Spearman snapshot Dataset subset: ProteinGym AMFR 4G3O official snapshot cohort | -0.257 spearman_rho correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceProgen3 112m AMFR official snapshot Not reported Aggregation: Not reported ProteinGym AMFR assay-level Spearman comparison · DMS_substitutions_Spearman_DMS_level.csv line 15, DMS ID=AMFR_HUMAN_Tsuboyama_2023_4G3O, column=Progen3 112m |
| Configuration: Progen3 1B [ProteinGym 144fe22b snapshot] | Protocol: ProteinGym AMFR official zero-shot Spearman snapshot Dataset subset: ProteinGym AMFR 4G3O official snapshot cohort | -0.153 spearman_rho correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceProgen3 1B AMFR official snapshot Not reported Aggregation: Not reported ProteinGym AMFR assay-level Spearman comparison · DMS_substitutions_Spearman_DMS_level.csv line 15, DMS ID=AMFR_HUMAN_Tsuboyama_2023_4G3O, column=Progen3 1B |
| Configuration: Progen3 219m [ProteinGym 144fe22b snapshot] | Protocol: ProteinGym AMFR official zero-shot Spearman snapshot Dataset subset: ProteinGym AMFR 4G3O official snapshot cohort | -0.164 spearman_rho correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceProgen3 219m AMFR official snapshot Not reported Aggregation: Not reported ProteinGym AMFR assay-level Spearman comparison · DMS_substitutions_Spearman_DMS_level.csv line 15, DMS ID=AMFR_HUMAN_Tsuboyama_2023_4G3O, column=Progen3 219m |
| Configuration: Progen3 339m [ProteinGym 144fe22b snapshot] | Protocol: ProteinGym AMFR official zero-shot Spearman snapshot Dataset subset: ProteinGym AMFR 4G3O official snapshot cohort | -0.253 spearman_rho correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceProgen3 339m AMFR official snapshot Not reported Aggregation: Not reported ProteinGym AMFR assay-level Spearman comparison · DMS_substitutions_Spearman_DMS_level.csv line 15, DMS ID=AMFR_HUMAN_Tsuboyama_2023_4G3O, column=Progen3 339m |
| Configuration: Progen3 3B [ProteinGym 144fe22b snapshot] | Protocol: ProteinGym AMFR official zero-shot Spearman snapshot Dataset subset: ProteinGym AMFR 4G3O official snapshot cohort | -0.133 spearman_rho correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceProgen3 3B AMFR official snapshot Not reported Aggregation: Not reported ProteinGym AMFR assay-level Spearman comparison · DMS_substitutions_Spearman_DMS_level.csv line 15, DMS ID=AMFR_HUMAN_Tsuboyama_2023_4G3O, column=Progen3 3B |
| Configuration: Progen3 762m [ProteinGym 144fe22b snapshot] | Protocol: ProteinGym AMFR official zero-shot Spearman snapshot Dataset subset: ProteinGym AMFR 4G3O official snapshot cohort | -0.209 spearman_rho correlation · higher Uncertainty: type: unreported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceProgen3 762m AMFR official snapshot Not reported Aggregation: Not reported ProteinGym AMFR assay-level Spearman comparison · DMS_substitutions_Spearman_DMS_level.csv line 15, DMS ID=AMFR_HUMAN_Tsuboyama_2023_4G3O, column=Progen3 762m |
Source checking is not independent reproduction. Release 2026-09-30-e37e3ab1284d.
Use this model
How it works, versions and access
Versions and evaluated configurations
- Progen3 112m [ProteinGym 144fe22b snapshot] · variant of
- Progen3 1B [ProteinGym 144fe22b snapshot] · variant of
- Progen3 219m [ProteinGym 144fe22b snapshot] · variant of
- Progen3 339m [ProteinGym 144fe22b snapshot] · variant of
- Progen3 3B [ProteinGym 144fe22b snapshot] · variant of
- Progen3 762m [ProteinGym 144fe22b snapshot] · variant of
Strengths, limitations and unresolved questions
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
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Sources and history
View linked audit checks and correction history
Release 2026-09-30-e37e3ab1284d · Record review: source checked
1 source records and release history
- ProteinGym AMFR assay-level Spearman comparison · Original source · 144fe22b07dfaeec2b366f2346203a9838a55b4c
Technical metadata and extraction receipts
Stable ID: uc20260930-model-progen3
- areas
- proteins-complexes
- source locator
- Pinned ProteinGym Spearman CSV header: Progen3 112m
- review
- method: automated_source_review; reviewer: Codex experimental-use-case curation; date: 2026-09-30; reviewed at: 2026-09-30T21:40:59.576893+00:00; scope: Primary-source transcription and catalogue applicability audit; not human scientific review or independent experimental reproduction.
- entity level
- family
- identity scope
- Family/method identity only; no undocumented checkpoint equivalence.
Related records
- variant of: Progen3 112m [ProteinGym 144fe22b snapshot]
- variant of: Progen3 1B [ProteinGym 144fe22b snapshot]
- variant of: Progen3 219m [ProteinGym 144fe22b snapshot]
- variant of: Progen3 339m [ProteinGym 144fe22b snapshot]
- variant of: Progen3 3B [ProteinGym 144fe22b snapshot]
- variant of: Progen3 762m [ProteinGym 144fe22b snapshot]