rewire.itbenchmarks
Evaluation

abdelaal brain svmrejection test=VISp train=MTG

Author-reported evaluation; no new execution.

Research readiness

These checks assess whether the evidence supports a reproducible investigation. A source-checked score alone does not meet these requirements.

Release 2026-10-07-e11db1d1c586 · Evidence verified: Not verified

Evidence incomplete

Replay metrics

Exact outcomes, predictions, identifiers and evaluator are connected.

Missing or unresolved evidence

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  • join integrity: verification is missing
  • score semantics: verification is missing
  • metric replay: verification is missing

Verified: Not verified

Evidence incomplete

Investigate discrepancies

Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • metric replay: verification is missing
  • annotations: verification is missing
  • dependence: verification is missing

Verified: Not verified

Evidence incomplete

Run locally

A pinned recipe describes the inputs, environment and resource requirements.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
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Verified: Not verified

Evidence incomplete

Validate independently

Separate data and exposure records support an independent test.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
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  • join integrity: verification is missing
  • score semantics: verification is missing
  • independent validation: verification is missing
  • overlap checked: verification is missing

Verified: Not verified

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No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.

Read reviewed discrepancy investigations

Evaluation results

1 evaluation · 1 result. Different protocols are not a single leaderboard.

Filter evaluations

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configurationProtocol and datasetFindingEvidence and details
Configuration: SVMrejection — Abdelaal et al. 2019 Table 1Protocol: Abdelaal et al. 2019 inter-dataset brain comparison: VISp/ALM/MTG, 34-population annotation (Figure S10 Panel B)
Dataset: VISp brain single-cell RNA-seq (scRNA-seq) dataset (Abdelaal et al. 2019, Table 2)
81.1% pct-unlabeled
percent · unknown

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

abdelaal brain svmrejection test=VISp train=MTG

Not reported

Aggregation: Not reported

A comparison of automatic cell identification methods for single-cell RNA sequencing data — Additional File 1 (Supplementary Data) · Figure S10, Panel B (page 15 of 18), row "SVMrejection", test set VISp, training set(s) MTG

Source checking is not independent reproduction. Release 2026-10-07-e11db1d1c586.

Evaluation procedure

Not reported

Configuration
SVMrejection — Abdelaal et al. 2019 Table 1
Protocol
Abdelaal et al. 2019 inter-dataset brain comparison: VISp/ALM/MTG, 34-population annotation (Figure S10 Panel B)
Dataset
VISp brain single-cell RNA-seq (scRNA-seq) dataset (Abdelaal et al. 2019, Table 2)
origin
Author-reported evaluation
configuration
Not reported
protocol id
ucc-research-protocol-abdelaal-brain-inter-34pop
dataset version
Abdelaal et al. 2019 Figure S10 Panel B; test set VISp, trained on MTG
split
Inter-dataset (cross-dataset, cross-species where applicable): trained on whole dataset(s) MTG, tested on whole dataset VISp. Not a within-dataset cross-validation split.
population
Table 2 raw dataset size for the test set (VISp) is recorded on ucc-research-data-abdelaal-visp as context only; the scored denominator for this specific experiment is UNREPORTED in the retrieved sources.
aggregation
metric-specific; inspect result

Metadata review: source checked. Unreported conditions prevent automatic comparisons.

Reproduction

Split
Inter-dataset (cross-dataset, cross-species where applicable): trained on whole dataset(s) MTG, tested on whole dataset VISp. Not a within-dataset cross-validation split.
Adaptation
Not reported
Scoring implementation
Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

11 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-07-e11db1d1c586
Property and statementOriginal source and locationReview and provenance
attributes.comparison.aggregation
metric-specific; inspect result
Context-only references
A comparison of automatic cell identification methods for single-cell RNA sequencing data — Additional File 1 (Supplementary Data)

Original source ↗

No field-specific location recorded

Version: 10.1186/s13059-019-1795-z; Additional File 1 (Supplementary Data PDF)
Retrieved: 2026-10-06T21:17:27Z

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.aggregation

Source artifact SHA-256: Not recorded

Hash scope: Page-level pdftoppm image render (2400 dpi for Figure S10 panels; up to 4800 dpi spot-checked on Figure S9 Panel A, which carries no printed digits and is not ingested here), read directly as an image. Not pdftotext (the heatmap values are not present in the PDF's text layer), not OCR, not color-to-value inference.

Inspected artifact

attributes.comparison.dataset_version
Abdelaal et al. 2019 Figure S10 Panel B; test set VISp, trained on MTG
Context-only references
A comparison of automatic cell identification methods for single-cell RNA sequencing data — Additional File 1 (Supplementary Data)

Original source ↗

No field-specific location recorded

Version: 10.1186/s13059-019-1795-z; Additional File 1 (Supplementary Data PDF)
Retrieved: 2026-10-06T21:17:27Z

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.dataset_version

Source artifact SHA-256: Not recorded

Hash scope: Page-level pdftoppm image render (2400 dpi for Figure S10 panels; up to 4800 dpi spot-checked on Figure S9 Panel A, which carries no printed digits and is not ingested here), read directly as an image. Not pdftotext (the heatmap values are not present in the PDF's text layer), not OCR, not color-to-value inference.

Inspected artifact

attributes.comparison.population
Table 2 raw dataset size for the test set (VISp) is recorded on ucc-research-data-abdelaal-visp as context only; the scored denominator for this specific experiment is UNREPORTED in the retrieved sources.
Context-only references
A comparison of automatic cell identification methods for single-cell RNA sequencing data — Additional File 1 (Supplementary Data)

Original source ↗

No field-specific location recorded

Version: 10.1186/s13059-019-1795-z; Additional File 1 (Supplementary Data PDF)
Retrieved: 2026-10-06T21:17:27Z

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.population

Source artifact SHA-256: Not recorded

Hash scope: Page-level pdftoppm image render (2400 dpi for Figure S10 panels; up to 4800 dpi spot-checked on Figure S9 Panel A, which carries no printed digits and is not ingested here), read directly as an image. Not pdftotext (the heatmap values are not present in the PDF's text layer), not OCR, not color-to-value inference.

Inspected artifact

attributes.comparison.protocol_id
ucc-research-protocol-abdelaal-brain-inter-34pop
Context-only references
A comparison of automatic cell identification methods for single-cell RNA sequencing data — Additional File 1 (Supplementary Data)

Original source ↗

No field-specific location recorded

Version: 10.1186/s13059-019-1795-z; Additional File 1 (Supplementary Data PDF)
Retrieved: 2026-10-06T21:17:27Z

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.protocol_id

Source artifact SHA-256: Not recorded

Hash scope: Page-level pdftoppm image render (2400 dpi for Figure S10 panels; up to 4800 dpi spot-checked on Figure S9 Panel A, which carries no printed digits and is not ingested here), read directly as an image. Not pdftotext (the heatmap values are not present in the PDF's text layer), not OCR, not color-to-value inference.

Inspected artifact

attributes.comparison.split
Inter-dataset (cross-dataset, cross-species where applicable): trained on whole dataset(s) MTG, tested on whole dataset VISp. Not a within-dataset cross-validation split.
Context-only references
A comparison of automatic cell identification methods for single-cell RNA sequencing data — Additional File 1 (Supplementary Data)

Original source ↗

No field-specific location recorded

Version: 10.1186/s13059-019-1795-z; Additional File 1 (Supplementary Data PDF)
Retrieved: 2026-10-06T21:17:27Z

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.split

Source artifact SHA-256: Not recorded

Hash scope: Page-level pdftoppm image render (2400 dpi for Figure S10 panels; up to 4800 dpi spot-checked on Figure S9 Panel A, which carries no printed digits and is not ingested here), read directly as an image. Not pdftotext (the heatmap values are not present in the PDF's text layer), not OCR, not color-to-value inference.

Inspected artifact

attributes.origin
author_reported
Context-only references
A comparison of automatic cell identification methods for single-cell RNA sequencing data — Additional File 1 (Supplementary Data)

Original source ↗

No field-specific location recorded

Version: 10.1186/s13059-019-1795-z; Additional File 1 (Supplementary Data PDF)
Retrieved: 2026-10-06T21:17:27Z

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.origin

Source artifact SHA-256: Not recorded

Hash scope: Page-level pdftoppm image render (2400 dpi for Figure S10 panels; up to 4800 dpi spot-checked on Figure S9 Panel A, which carries no printed digits and is not ingested here), read directly as an image. Not pdftotext (the heatmap values are not present in the PDF's text layer), not OCR, not color-to-value inference.

Inspected artifact

description
Author-reported evaluation; no new execution.
Context-only references
A comparison of automatic cell identification methods for single-cell RNA sequencing data — Additional File 1 (Supplementary Data)

Original source ↗

No field-specific location recorded

Version: 10.1186/s13059-019-1795-z; Additional File 1 (Supplementary Data PDF)
Retrieved: 2026-10-06T21:17:27Z

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: description

Source artifact SHA-256: Not recorded

Hash scope: Page-level pdftoppm image render (2400 dpi for Figure S10 panels; up to 4800 dpi spot-checked on Figure S9 Panel A, which carries no printed digits and is not ingested here), read directly as an image. Not pdftotext (the heatmap values are not present in the PDF's text layer), not OCR, not color-to-value inference.

Inspected artifact

Relationship: configuration
ucc-research-config-abdelaal-svm-rejection
Context-only references
A comparison of automatic cell identification methods for single-cell RNA sequencing data — Additional File 1 (Supplementary Data)

Original source ↗

No field-specific location recorded

Version: 10.1186/s13059-019-1795-z; Additional File 1 (Supplementary Data PDF)
Retrieved: 2026-10-06T21:17:27Z

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: links:configuration:ucc-research-config-abdelaal-svm-rejection

Source artifact SHA-256: Not recorded

Hash scope: Page-level pdftoppm image render (2400 dpi for Figure S10 panels; up to 4800 dpi spot-checked on Figure S9 Panel A, which carries no printed digits and is not ingested here), read directly as an image. Not pdftotext (the heatmap values are not present in the PDF's text layer), not OCR, not color-to-value inference.

Inspected artifact

Relationship: dataset
ucc-research-data-abdelaal-visp
Context-only references
A comparison of automatic cell identification methods for single-cell RNA sequencing data — Additional File 1 (Supplementary Data)

Original source ↗

No field-specific location recorded

Version: 10.1186/s13059-019-1795-z; Additional File 1 (Supplementary Data PDF)
Retrieved: 2026-10-06T21:17:27Z

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: links:dataset:ucc-research-data-abdelaal-visp

Source artifact SHA-256: Not recorded

Hash scope: Page-level pdftoppm image render (2400 dpi for Figure S10 panels; up to 4800 dpi spot-checked on Figure S9 Panel A, which carries no printed digits and is not ingested here), read directly as an image. Not pdftotext (the heatmap values are not present in the PDF's text layer), not OCR, not color-to-value inference.

Inspected artifact

Relationship: protocol
ucc-research-protocol-abdelaal-brain-inter-34pop
Context-only references
A comparison of automatic cell identification methods for single-cell RNA sequencing data — Additional File 1 (Supplementary Data)

Original source ↗

No field-specific location recorded

Version: 10.1186/s13059-019-1795-z; Additional File 1 (Supplementary Data PDF)
Retrieved: 2026-10-06T21:17:27Z

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: links:protocol:ucc-research-protocol-abdelaal-brain-inter-34pop

Source artifact SHA-256: Not recorded

Hash scope: Page-level pdftoppm image render (2400 dpi for Figure S10 panels; up to 4800 dpi spot-checked on Figure S9 Panel A, which carries no printed digits and is not ingested here), read directly as an image. Not pdftotext (the heatmap values are not present in the PDF's text layer), not OCR, not color-to-value inference.

Inspected artifact

Sources and history

View linked audit checks and correction history

Release 2026-10-07-e11db1d1c586 · Record review: source checked

1 source records and release historyDownload this release
Technical metadata and extraction receipts

Stable ID: ucc-research-eval-abdelaal-brain-visp-from-mtg

origin
author_reported
review
method: automated_source_review; actor: Claude Sonnet cell-type-annotation-transfer evidence-research worker; reviewed at: 2026-10-07T07:44:08Z; note: Source-backed transcription of Abdelaal et al. 2019 Additional File 1 (Supplementary Data PDF), a separate byte artifact from the already-catalogued main-text XML. Originally retrieved 2026-10-06T21:17:27Z via the Springer/BMC static-content route (https://static-content.springer.com/esm/art%3A10.1186%2Fs13059-019-1795-z/MediaObjects/13059_2019_1795_MOESM1_ESM.pdf), HTTP 200, 13,495,279 bytes. Re-verified byte-identical (SHA-256 unchanged) in this pass against the cached copy in the neighboring cell-type-evidence-20261006 worktree before archiving. Figure S10 (page 15 of 18) read directly from a pdftoppm image render at 2400 dpi (not OCR, not color inference); Panel B's printed numeric cell values independently re-confirmed against the original PDF by a separate reviewer prior to this ingestion. No new model execution, independent experimental replication, or qualified human scientific review.
comparison
protocol id: ucc-research-protocol-abdelaal-brain-inter-34pop; dataset version: Abdelaal et al. 2019 Figure S10 Panel B; test set VISp, trained on MTG; split: Inter-dataset (cross-dataset, cross-species where applicable): trained on whole dataset(s) MTG, tested on whole dataset VISp. Not a within-dataset cross-validation split.; population: Table 2 raw dataset size for the test set (VISp) is recorded on ucc-research-data-abdelaal-visp as context only; the scored denominator for this specific experiment is UNREPORTED in the retrieved sources.; aggregation: metric-specific; inspect result
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