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1 evaluation · 3 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: EpiMap (Gschwind et al. 2026) | Protocol: Held-out CRISPR enhancer-gene benchmark, weighted metrics, five cell types (Gschwind et al. 2026 Supplementary Table 3) Dataset: Held-out CRISPR enhancer-gene pairs in five cell types (Gschwind et al. 2026) | 0.268 auprc fraction · higher Uncertainty: 95% CI 0.202767496369732 to 0.342972872868445 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceEpiMap on held-out CRISPR pairs, five cell types regulatory-variant-20261009-protocol-gschwind2026-heldout-weighted Aggregation: Not reported An encyclopedia of human enhancer-gene regulatory interactions; Gschwind et al. 2026, Supplementary Table 3 · Supplementary Table 3 'Held-out benchmarks', row 5 (D5:F5); Dataset 'Held-out', Predictor 'EpiMap', metric 'Weighted AUPRC' |
| Configuration: EpiMap (Gschwind et al. 2026) | Protocol: Held-out CRISPR enhancer-gene benchmark, weighted metrics, five cell types (Gschwind et al. 2026 Supplementary Table 3) Dataset: Held-out CRISPR enhancer-gene pairs in five cell types (Gschwind et al. 2026) | 0.292 precision fraction · higher Uncertainty: 95% CI 0.244244656893669 to 0.342593944957384 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceEpiMap on held-out CRISPR pairs, five cell types regulatory-variant-20261009-protocol-gschwind2026-heldout-weighted Aggregation: Not reported An encyclopedia of human enhancer-gene regulatory interactions; Gschwind et al. 2026, Supplementary Table 3 · Supplementary Table 3 'Held-out benchmarks', row 11 (D11:F11); Dataset 'Held-out', Predictor 'EpiMap', metric 'Weighted precision at threshold' |
| Configuration: EpiMap (Gschwind et al. 2026) | Protocol: Held-out CRISPR enhancer-gene benchmark, weighted metrics, five cell types (Gschwind et al. 2026 Supplementary Table 3) Dataset: Held-out CRISPR enhancer-gene pairs in five cell types (Gschwind et al. 2026) | 0.545 recall fraction · higher Uncertainty: 95% CI 0.471122984227133 to 0.616597040982763 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceEpiMap on held-out CRISPR pairs, five cell types regulatory-variant-20261009-protocol-gschwind2026-heldout-weighted Aggregation: Not reported An encyclopedia of human enhancer-gene regulatory interactions; Gschwind et al. 2026, Supplementary Table 3 · Supplementary Table 3 'Held-out benchmarks', row 17 (D17:F17); Dataset 'Held-out', Predictor 'EpiMap', metric 'Weighted recall at threshold' |
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regulatory-variant-20261009-protocol-gschwind2026-heldout-weighted
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36 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.comparison.adaptation Not reported Context-only references | An encyclopedia of human enhancer-gene regulatory interactions Supplementary Table 3 'Held-out benchmarks', Dataset 'Held-out', Predictor 'EpiMap' Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Nature 657(8130):179, published online 2026-07-15; PMC13471189 full-text XML | missing or unspecified No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.adaptation Not reported Context-only references | Gschwind et al. 2026, Supplementary Table 3 Supplementary Table 3 'Held-out benchmarks', Dataset 'Held-out', Predictor 'EpiMap' Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Supplementary_Table_3.xlsx in 41586_2026_10781_MOESM3_ESM.zip (folder 2023-11-20318B-s3) inside the Europe PMC supplementaryFiles zip | missing or unspecified No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of the xlsx member. MOESM3 zip SHA-256 88eb6c5239019cbec55281b545a3b6e450e2a83384d067ca94a0974968428332; outer supplementaryFiles zip SHA-256 78dc8641d9c6861568465c274b80329f7046bf7a0145c2546deb422f9a2c0930 (assembled per request). |
| attributes.comparison.aggregation Pooled over pairs, weighted Context-only references | An encyclopedia of human enhancer-gene regulatory interactions Supplementary Table 3 'Held-out benchmarks', Dataset 'Held-out', Predictor 'EpiMap' Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Nature 657(8130):179, published online 2026-07-15; PMC13471189 full-text XML | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.aggregation Pooled over pairs, weighted Context-only references | Gschwind et al. 2026, Supplementary Table 3 Supplementary Table 3 'Held-out benchmarks', Dataset 'Held-out', Predictor 'EpiMap' Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Supplementary_Table_3.xlsx in 41586_2026_10781_MOESM3_ESM.zip (folder 2023-11-20318B-s3) inside the Europe PMC supplementaryFiles zip | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of the xlsx member. MOESM3 zip SHA-256 88eb6c5239019cbec55281b545a3b6e450e2a83384d067ca94a0974968428332; outer supplementaryFiles zip SHA-256 78dc8641d9c6861568465c274b80329f7046bf7a0145c2546deb422f9a2c0930 (assembled per request). |
| attributes.comparison.budget Not reported Context-only references | An encyclopedia of human enhancer-gene regulatory interactions Supplementary Table 3 'Held-out benchmarks', Dataset 'Held-out', Predictor 'EpiMap' Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Nature 657(8130):179, published online 2026-07-15; PMC13471189 full-text XML | missing or unspecified No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.budget Not reported Context-only references | Gschwind et al. 2026, Supplementary Table 3 Supplementary Table 3 'Held-out benchmarks', Dataset 'Held-out', Predictor 'EpiMap' Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Supplementary_Table_3.xlsx in 41586_2026_10781_MOESM3_ESM.zip (folder 2023-11-20318B-s3) inside the Europe PMC supplementaryFiles zip | missing or unspecified No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of the xlsx member. MOESM3 zip SHA-256 88eb6c5239019cbec55281b545a3b6e450e2a83384d067ca94a0974968428332; outer supplementaryFiles zip SHA-256 78dc8641d9c6861568465c274b80329f7046bf7a0145c2546deb422f9a2c0930 (assembled per request). |
| attributes.comparison.dataset_version As published Context-only references | An encyclopedia of human enhancer-gene regulatory interactions Supplementary Table 3 'Held-out benchmarks', Dataset 'Held-out', Predictor 'EpiMap' Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Nature 657(8130):179, published online 2026-07-15; PMC13471189 full-text XML | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.dataset_version As published Context-only references | Gschwind et al. 2026, Supplementary Table 3 Supplementary Table 3 'Held-out benchmarks', Dataset 'Held-out', Predictor 'EpiMap' Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Supplementary_Table_3.xlsx in 41586_2026_10781_MOESM3_ESM.zip (folder 2023-11-20318B-s3) inside the Europe PMC supplementaryFiles zip | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of the xlsx member. MOESM3 zip SHA-256 88eb6c5239019cbec55281b545a3b6e450e2a83384d067ca94a0974968428332; outer supplementaryFiles zip SHA-256 78dc8641d9c6861568465c274b80329f7046bf7a0145c2546deb422f9a2c0930 (assembled per request). |
| attributes.comparison.inputs Predictor's genome-wide element-gene scores in the matching cell type Context-only references | An encyclopedia of human enhancer-gene regulatory interactions Supplementary Table 3 'Held-out benchmarks', Dataset 'Held-out', Predictor 'EpiMap' Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Nature 657(8130):179, published online 2026-07-15; PMC13471189 full-text XML | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.inputs Predictor's genome-wide element-gene scores in the matching cell type Context-only references | Gschwind et al. 2026, Supplementary Table 3 Supplementary Table 3 'Held-out benchmarks', Dataset 'Held-out', Predictor 'EpiMap' Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Supplementary_Table_3.xlsx in 41586_2026_10781_MOESM3_ESM.zip (folder 2023-11-20318B-s3) inside the Europe PMC supplementaryFiles zip | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of the xlsx member. MOESM3 zip SHA-256 88eb6c5239019cbec55281b545a3b6e450e2a83384d067ca94a0974968428332; outer supplementaryFiles zip SHA-256 78dc8641d9c6861568465c274b80329f7046bf7a0145c2546deb422f9a2c0930 (assembled per request). |
Release 2026-10-10-7fcc3e48a123 · Record review: source checked
Stable ID: regulatory-variant-20261009-eval-gschwind2026-heldout-epimap