ProteinGym evaluation of Embed. MSAT on Supervised substitutions, random split, MSE, scored with MSE.
1 evaluation · 1 result. Different protocols are not a single leaderboard.
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: Embed. MSAT | Task: ProteinGym SUP-SUB-MSE-RAND: Supervised substitutions, random split, MSE Dataset subset: ProteinGym substitution DMS assays (ProteinGym split) | 0.573 MSE unit-unreported · lower Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceEmbed. MSAT on ProteinGym SUP-SUB-MSE-RAND: Supervised substitutions, random split, MSE Supervised fitness prediction under three cross-validation schemes: contiguous, modulo and random splits. Aggregation: Not reported ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design · Table 3, row(MSAT), column(Supervised substitutions, random split, MSE) |
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Supervised fitness prediction under three cross-validation schemes: contiguous, modulo and random splits.
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12 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Comparison: metric implementation MSE Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 3, row(MSAT), column(Supervised substitutions, random split, MSE) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Comparison: protocol id proteingym-task-sup-sub-mse-rand Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 3, row(MSAT), column(Supervised substitutions, random split, MSE) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Evaluation group id evaluation-group-proteingym-table-3-supervised-substitutions-rand-embed-msat Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 3, row(MSAT), column(Supervised substitutions, random split, MSE) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Evaluation group name Embed. MSAT · supervised substitutions, random split Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 3, row(MSAT), column(Supervised substitutions, random split, MSE) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Origin author_reported Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 3, row(MSAT), column(Supervised substitutions, random split, MSE) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Protocol Supervised fitness prediction under three cross-validation schemes: contiguous, modulo and random splits. Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 3, row(MSAT), column(Supervised substitutions, random split, MSE) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Source location Table 3, row(MSAT), column(Supervised substitutions, random split, MSE) Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 3, row(MSAT), column(Supervised substitutions, random split, MSE) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Description ProteinGym evaluation of Embed. MSAT on Supervised substitutions, random split, MSE, scored with MSE. Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 3, row(MSAT), column(Supervised substitutions, random split, MSE) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: assessment proteingym-task-sup-sub-mse-rand Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 3, row(MSAT), column(Supervised substitutions, random split, MSE) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: data proteingym-dataset-proteingym-substitution-dms-assays Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 3, row(MSAT), column(Supervised substitutions, random split, MSE) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Release 2026-11-02-a7f03c9e55a5 · Record review: source checked
Stable ID: proteingym-evaluation-embed-msat-sup-sub-mse-rand