rewire.itbenchmarks
Evaluation

dyMEAN on ProteinBench AB-RATIONALITY-CLASHES-INNER: Rationality Clashes-inner

ProteinBench evaluation of dyMEAN on Rationality Clashes-inner, scored with Clashes-inner.

Research readiness

These checks assess whether the evidence supports a reproducible investigation. A source-checked score alone does not meet these requirements.

Release 2026-09-29-06401fd5b220 · Evidence verified: Not verified

Evidence incomplete

Replay metrics

Exact outcomes, predictions, identifiers and evaluator are connected.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • metric replay: verification is missing

Verified: Not verified

Evidence incomplete

Investigate discrepancies

Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • metric replay: verification is missing
  • annotations: verification is missing
  • dependence: verification is missing

Verified: Not verified

Evidence incomplete

Run locally

A pinned recipe describes the inputs, environment and resource requirements.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • recipe pinned: verification is missing
  • resource estimate: verification is missing

Verified: Not verified

Evidence incomplete

Validate independently

Separate data and exposure records support an independent test.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • independent validation: verification is missing
  • overlap checked: verification is missing

Verified: Not verified

Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.

Artifacts and reproduction

No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.

Read reviewed discrepancy investigations

Evaluation results

1 evaluation · 1 result. Different protocols are not a single leaderboard.

Filter evaluations

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configurationProtocol and datasetFindingEvidence and details
Configuration: dyMEANTask: ProteinBench AB-RATIONALITY-CLASHES-INNER: Rationality Clashes-inner
Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split)
9.15 clashes-inner
score · lower

Uncertainty: Not reported

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

dyMEAN on ProteinBench AB-RATIONALITY-CLASHES-INNER: Rationality Clashes-inner

Antibody design on the 55 antibody-antigen complexes of the RAbD set.

Aggregation: Not reported

proteinbench primary benchmark evidence · Table 6, row(dyMEAN), column(Rationality Clashes-inner ↓)

Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.

Evaluation procedure

Antibody design on the 55 antibody-antigen complexes of the RAbD set.

Configuration
dyMEAN
Task
ProteinBench AB-RATIONALITY-CLASHES-INNER: Rationality Clashes-inner
Dataset subset
RAbD, 55 antibody-antigen complexes (ProteinBench split)
origin
Author-reported evaluation
configuration
Not reported
protocol id
proteinbench-task-ab-rationality-clashes-inner
metric implementation
Clashes-inner

Metadata review: source checked. Unreported conditions prevent automatic comparisons.

Reproduction

Split
Not reported
Adaptation
Not reported
Scoring implementation
Clashes-inner

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

10 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statementOriginal source and locationReview and provenance
attributes.comparison.metric_implementation
Clashes-inner
Context-only references
proteinbench primary benchmark evidence

Original source ↗

Table 6, row(dyMEAN), column(Rationality Clashes-inner ↓)

Version: 2409.06744v1
Retrieved: 2026-09-16T21:07:13.231727+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.metric_implementation

Source artifact SHA-256: 4334d636223ad42bfb9ae68aae03f5a255c29ba1cebe7b8f9588fb3b9b5453b2

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.comparison.protocol_id
proteinbench-task-ab-rationality-clashes-inner
Context-only references
proteinbench primary benchmark evidence

Original source ↗

Table 6, row(dyMEAN), column(Rationality Clashes-inner ↓)

Version: 2409.06744v1
Retrieved: 2026-09-16T21:07:13.231727+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.protocol_id

Source artifact SHA-256: 4334d636223ad42bfb9ae68aae03f5a255c29ba1cebe7b8f9588fb3b9b5453b2

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.origin
author_reported
Context-only references
proteinbench primary benchmark evidence

Original source ↗

Table 6, row(dyMEAN), column(Rationality Clashes-inner ↓)

Version: 2409.06744v1
Retrieved: 2026-09-16T21:07:13.231727+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.origin

Source artifact SHA-256: 4334d636223ad42bfb9ae68aae03f5a255c29ba1cebe7b8f9588fb3b9b5453b2

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.protocol
Antibody design on the 55 antibody-antigen complexes of the RAbD set.
Context-only references
proteinbench primary benchmark evidence

Original source ↗

Table 6, row(dyMEAN), column(Rationality Clashes-inner ↓)

Version: 2409.06744v1
Retrieved: 2026-09-16T21:07:13.231727+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.protocol

Source artifact SHA-256: 4334d636223ad42bfb9ae68aae03f5a255c29ba1cebe7b8f9588fb3b9b5453b2

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.source_locator
Table 6, row(dyMEAN), column(Rationality Clashes-inner ↓)
Context-only references
proteinbench primary benchmark evidence

Original source ↗

Table 6, row(dyMEAN), column(Rationality Clashes-inner ↓)

Version: 2409.06744v1
Retrieved: 2026-09-16T21:07:13.231727+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 4334d636223ad42bfb9ae68aae03f5a255c29ba1cebe7b8f9588fb3b9b5453b2

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

description
ProteinBench evaluation of dyMEAN on Rationality Clashes-inner, scored with Clashes-inner.
Context-only references
proteinbench primary benchmark evidence

Original source ↗

Table 6, row(dyMEAN), column(Rationality Clashes-inner ↓)

Version: 2409.06744v1
Retrieved: 2026-09-16T21:07:13.231727+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: description

Source artifact SHA-256: 4334d636223ad42bfb9ae68aae03f5a255c29ba1cebe7b8f9588fb3b9b5453b2

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Relationship: benchmark
proteinbench-task-ab-rationality-clashes-inner
Context-only references
proteinbench primary benchmark evidence

Original source ↗

Table 6, row(dyMEAN), column(Rationality Clashes-inner ↓)

Version: 2409.06744v1
Retrieved: 2026-09-16T21:07:13.231727+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: links:benchmark:proteinbench-task-ab-rationality-clashes-inner

Source artifact SHA-256: 4334d636223ad42bfb9ae68aae03f5a255c29ba1cebe7b8f9588fb3b9b5453b2

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Relationship: dataset
proteinbench-dataset-rabd-55-antibody-antigen-complexes
Context-only references
proteinbench primary benchmark evidence

Original source ↗

Table 6, row(dyMEAN), column(Rationality Clashes-inner ↓)

Version: 2409.06744v1
Retrieved: 2026-09-16T21:07:13.231727+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: links:dataset:proteinbench-dataset-rabd-55-antibody-antigen-complexes

Source artifact SHA-256: 4334d636223ad42bfb9ae68aae03f5a255c29ba1cebe7b8f9588fb3b9b5453b2

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Relationship: model
proteinbench-method-dymean
Context-only references
proteinbench primary benchmark evidence

Original source ↗

Table 6, row(dyMEAN), column(Rationality Clashes-inner ↓)

Version: 2409.06744v1
Retrieved: 2026-09-16T21:07:13.231727+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: links:model:proteinbench-method-dymean

Source artifact SHA-256: 4334d636223ad42bfb9ae68aae03f5a255c29ba1cebe7b8f9588fb3b9b5453b2

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

name
dyMEAN on ProteinBench AB-RATIONALITY-CLASHES-INNER: Rationality Clashes-inner
Context-only references
proteinbench primary benchmark evidence

Original source ↗

Table 6, row(dyMEAN), column(Rationality Clashes-inner ↓)

Version: 2409.06744v1
Retrieved: 2026-09-16T21:07:13.231727+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: name

Source artifact SHA-256: 4334d636223ad42bfb9ae68aae03f5a255c29ba1cebe7b8f9588fb3b9b5453b2

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Sources and history

View linked audit checks and correction history

Release 2026-09-29-06401fd5b220 · Record review: source checked

1 source records and release historyDownload this release
Technical metadata and extraction receipts

Stable ID: proteinbench-evaluation-dymean-ab-rationality-clashes-inner

areas
proteins-complexes
tasks
Rationality Clashes-inner
origin
author_reported
protocol
Antibody design on the 55 antibody-antigen complexes of the RAbD set.
comparison
protocol id: proteinbench-task-ab-rationality-clashes-inner; metric implementation: Clashes-inner
missing metadata
checkpoint revision: unreported; seeds: unreported; budget: unreported; split manifest: unextracted
source locator
Table 6, row(dyMEAN), column(Rationality Clashes-inner ↓)
Related records

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