The split of RAbD, 55 antibody-antigen complexes that ProteinBench evaluated on. The upstream dataset release is not catalogued here, so no claim is made that this matches its original splits.
These checks assess whether the evidence supports a reproducible investigation. A source-checked score alone does not meet these requirements.
Release 2026-09-29-06401fd5b220 · Evidence verified: Not verified
Exact outcomes, predictions, identifiers and evaluator are connected.
Missing or unresolved evidence
Verified: Not verified
Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.
Missing or unresolved evidence
Verified: Not verified
A pinned recipe describes the inputs, environment and resource requirements.
Missing or unresolved evidence
Verified: Not verified
Separate data and exposure records support an independent test.
Missing or unresolved evidence
Verified: Not verified
Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.
No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.
100 evaluations · 100 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: AbDPO | Task: ProteinBench AB-ACCURACY-AAR: Accuracy AAR Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 31.29% ± 7.29 aar percent · higher Uncertainty: type: standard_deviation; value: 7.29 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO on ProteinBench AB-ACCURACY-AAR: Accuracy AAR Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO), column(Accuracy AAR ↑) |
| Configuration: AbDPO | Task: ProteinBench AB-ACCURACY-RMSD: Accuracy RMSD Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 2.79 ± 3.01 rmsd score · lower Uncertainty: type: standard_deviation; value: 3.01 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO on ProteinBench AB-ACCURACY-RMSD: Accuracy RMSD Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO), column(Accuracy RMSD ↓) |
| Configuration: AbDPO | Task: ProteinBench AB-ACCURACY-TM-SCORE: Accuracy TM-score Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 0.35 ± 0.06 tm-score score · higher Uncertainty: type: standard_deviation; value: 0.06 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO on ProteinBench AB-ACCURACY-TM-SCORE: Accuracy TM-score Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO), column(Accuracy TM-score ↑) |
| Configuration: AbDPO | Task: ProteinBench AB-FUNCTIONALITY-BINDING-ENERGY: Functionality Binding Energy Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 116.06 ± 186.06 binding-energy score · lower Uncertainty: type: standard_deviation; value: 186.06 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO on ProteinBench AB-FUNCTIONALITY-BINDING-ENERGY: Functionality Binding Energy Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO), column(Functionality Binding Energy ↓) |
| Configuration: AbDPO | Task: ProteinBench AB-RATIONALITY-CLASHES-INNER: Rationality Clashes-inner Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 4.14 ± 1.84 clashes-inner score · lower Uncertainty: type: standard_deviation; value: 1.84 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO on ProteinBench AB-RATIONALITY-CLASHES-INNER: Rationality Clashes-inner Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO), column(Rationality Clashes-inner ↓) |
| Configuration: AbDPO | Task: ProteinBench AB-RATIONALITY-CLASHES-OUTER: Rationality Clashes-outer Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 0 .10 ± 0.24 clashes-outer score · lower Uncertainty: type: standard_deviation; value: 0.24 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO on ProteinBench AB-RATIONALITY-CLASHES-OUTER: Rationality Clashes-outer Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO), column(Rationality Clashes-outer ↓) |
| Configuration: AbDPO | Task: ProteinBench AB-RATIONALITY-CN-SCORE: Rationality CN-score Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 1.33 ± 2.31 cn-score score · higher Uncertainty: type: standard_deviation; value: 2.31 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO on ProteinBench AB-RATIONALITY-CN-SCORE: Rationality CN-score Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO), column(Rationality CN-score ↑) |
| Configuration: AbDPO | Task: ProteinBench AB-RATIONALITY-SCRMSD: Rationality scRMSD Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 2.79 ± 3.25 scrmsd score · lower Uncertainty: type: standard_deviation; value: 3.25 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO on ProteinBench AB-RATIONALITY-SCRMSD: Rationality scRMSD Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO), column(Rationality scRMSD ↓) |
| Configuration: AbDPO | Task: ProteinBench AB-RATIONALITY-SEQNAT: Rationality SeqNat Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | -1.99 ± 0.34 seqnat score · higher Uncertainty: type: standard_deviation; value: 0.34 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO on ProteinBench AB-RATIONALITY-SEQNAT: Rationality SeqNat Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO), column(Rationality SeqNat ↑) |
| Configuration: AbDPO | Task: ProteinBench AB-RATIONALITY-TOTAL-ENERGY: Rationality Total Energy Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 270.12 ± 217.45 total-energy score · lower Uncertainty: type: standard_deviation; value: 217.45 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO on ProteinBench AB-RATIONALITY-TOTAL-ENERGY: Rationality Total Energy Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO), column(Rationality Total Energy ↓) |
| Configuration: AbDPO | Task: ProteinBench AB-SPECIFICITY-PHR: Specificity PHR Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 69.69% ± 8.49 phr percent · lower Uncertainty: type: standard_deviation; value: 8.49 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO on ProteinBench AB-SPECIFICITY-PHR: Specificity PHR Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO), column(Specificity PHR ↓) |
| Configuration: AbDPO | Task: ProteinBench AB-SPECIFICITY-SEQSIM-INNER: Specificity SeqSim-inner Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 0 .60 seqsim-inner score · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO on ProteinBench AB-SPECIFICITY-SEQSIM-INNER: Specificity SeqSim-inner Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO), column(Specificity SeqSim-inner ↑) |
| Configuration: AbDPO | Task: ProteinBench AB-SPECIFICITY-SEQSIM-OUTER: Specificity SeqSim-outer Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 0 .38 seqsim-outer score · lower Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO on ProteinBench AB-SPECIFICITY-SEQSIM-OUTER: Specificity SeqSim-outer Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO), column(Specificity SeqSim-outer ↓) |
| Configuration: AbDPO++ | Task: ProteinBench AB-ACCURACY-AAR: Accuracy AAR Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 36.25% ± 7.95 aar percent · higher Uncertainty: type: standard_deviation; value: 7.95 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO++ on ProteinBench AB-ACCURACY-AAR: Accuracy AAR Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO++), column(Accuracy AAR ↑) |
| Configuration: AbDPO++ | Task: ProteinBench AB-ACCURACY-RMSD: Accuracy RMSD Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 2.48 ± 0.59 rmsd score · lower Uncertainty: type: standard_deviation; value: 0.59 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO++ on ProteinBench AB-ACCURACY-RMSD: Accuracy RMSD Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO++), column(Accuracy RMSD ↓) |
| Configuration: AbDPO++ | Task: ProteinBench AB-ACCURACY-TM-SCORE: Accuracy TM-score Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 0.35 ± 0.06 tm-score score · higher Uncertainty: type: standard_deviation; value: 0.06 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO++ on ProteinBench AB-ACCURACY-TM-SCORE: Accuracy TM-score Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO++), column(Accuracy TM-score ↑) |
| Configuration: AbDPO++ | Task: ProteinBench AB-FUNCTIONALITY-BINDING-ENERGY: Functionality Binding Energy Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 2 23.73 ± 281.7 binding-energy score · lower Uncertainty: type: standard_deviation; value: 281.7 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO++ on ProteinBench AB-FUNCTIONALITY-BINDING-ENERGY: Functionality Binding Energy Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO++), column(Functionality Binding Energy ↓) |
| Configuration: AbDPO++ | Task: ProteinBench AB-RATIONALITY-CLASHES-INNER: Rationality Clashes-inner Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 1.66 ± 1.28 clashes-inner score · lower Uncertainty: type: standard_deviation; value: 1.28 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO++ on ProteinBench AB-RATIONALITY-CLASHES-INNER: Rationality Clashes-inner Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO++), column(Rationality Clashes-inner ↓) |
| Configuration: AbDPO++ | Task: ProteinBench AB-RATIONALITY-CLASHES-OUTER: Rationality Clashes-outer Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 0.08 ± 0.20 clashes-outer score · lower Uncertainty: type: standard_deviation; value: 0.20 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO++ on ProteinBench AB-RATIONALITY-CLASHES-OUTER: Rationality Clashes-outer Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO++), column(Rationality Clashes-outer ↓) |
| Configuration: AbDPO++ | Task: ProteinBench AB-RATIONALITY-CN-SCORE: Rationality CN-score Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 2.34 ± 3.20 cn-score score · higher Uncertainty: type: standard_deviation; value: 3.20 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO++ on ProteinBench AB-RATIONALITY-CN-SCORE: Rationality CN-score Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO++), column(Rationality CN-score ↑) |
| Configuration: AbDPO++ | Task: ProteinBench AB-RATIONALITY-SCRMSD: Rationality scRMSD Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 2.50 ± 0.75 scrmsd score · lower Uncertainty: type: standard_deviation; value: 0.75 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO++ on ProteinBench AB-RATIONALITY-SCRMSD: Rationality scRMSD Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO++), column(Rationality scRMSD ↓) |
| Configuration: AbDPO++ | Task: ProteinBench AB-RATIONALITY-SEQNAT: Rationality SeqNat Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | - 1.78 ± 0.43 seqnat score · higher Uncertainty: type: standard_deviation; value: 0.43 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO++ on ProteinBench AB-RATIONALITY-SEQNAT: Rationality SeqNat Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO++), column(Rationality SeqNat ↑) |
| Configuration: AbDPO++ | Task: ProteinBench AB-RATIONALITY-TOTAL-ENERGY: Rationality Total Energy Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 3 38.14 ± 266.48 total-energy score · lower Uncertainty: type: standard_deviation; value: 266.48 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO++ on ProteinBench AB-RATIONALITY-TOTAL-ENERGY: Rationality Total Energy Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO++), column(Rationality Total Energy ↓) |
| Configuration: AbDPO++ | Task: ProteinBench AB-SPECIFICITY-PHR: Specificity PHR Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 44.51% ± 9.55 phr percent · lower Uncertainty: type: standard_deviation; value: 9.55 Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO++ on ProteinBench AB-SPECIFICITY-PHR: Specificity PHR Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO++), column(Specificity PHR ↓) |
| Configuration: AbDPO++ | Task: ProteinBench AB-SPECIFICITY-SEQSIM-INNER: Specificity SeqSim-inner Dataset subset: RAbD, 55 antibody-antigen complexes (ProteinBench split) | 0.54 seqsim-inner score · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceAbDPO++ on ProteinBench AB-SPECIFICITY-SEQSIM-INNER: Specificity SeqSim-inner Antibody design on the 55 antibody-antigen complexes of the RAbD set. Aggregation: Not reported proteinbench primary benchmark evidence · Table 6, row(AbDPO++), column(Specificity SeqSim-inner ↑) |
Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.
This record describes a particular subset or cohort used in an evaluation. Its results do not describe the full dataset.
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
2 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| description The split of RAbD, 55 antibody-antigen complexes that ProteinBench evaluated on. The upstream dataset release is not catalogued here, so no claim is made that this matches its original splits. Context-only references | proteinbench primary benchmark evidence No field-specific location recorded Version: 2409.06744v1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| name RAbD, 55 antibody-antigen complexes (ProteinBench split) Context-only references | proteinbench primary benchmark evidence No field-specific location recorded Version: 2409.06744v1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
View linked audit checks and correction history
Release 2026-09-29-06401fd5b220 · Record review: source checked
Stable ID: proteinbench-dataset-rabd-55-antibody-antigen-complexes