PFMBench evaluation of SaProt on BindingDB, scored with Spearman.
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Release 2026-09-29-06401fd5b220 · Evidence verified: Not verified
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1 evaluation · 1 result. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: SaProt | Task: PFMBench BINDING-DB: BindingDB Dataset subset: BindingDB (PFMBench split) | 0.166 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceSaProt on PFMBench BINDING-DB: BindingDB Fine-tuned with an adapter under the PFMBench harness; train, validation and test counts are in Table 1. Aggregation: Not reported pfmbench primary benchmark evidence · Table 3, row(SaProt [ 55 ]), column(Bind. DB) |
Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.
Fine-tuned with an adapter under the PFMBench harness; train, validation and test counts are in Table 1.
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10 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.comparison.metric_implementation Spearman Context-only references | pfmbench primary benchmark evidence Table 3, row(SaProt [ 55 ]), column(Bind. DB) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.protocol_id pfmbench-task-binding-db Context-only references | pfmbench primary benchmark evidence Table 3, row(SaProt [ 55 ]), column(Bind. DB) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.origin author_reported Context-only references | pfmbench primary benchmark evidence Table 3, row(SaProt [ 55 ]), column(Bind. DB) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.protocol Fine-tuned with an adapter under the PFMBench harness; train, validation and test counts are in Table 1. Context-only references | pfmbench primary benchmark evidence Table 3, row(SaProt [ 55 ]), column(Bind. DB) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_locator Table 3, row(SaProt [ 55 ]), column(Bind. DB) Context-only references | pfmbench primary benchmark evidence Table 3, row(SaProt [ 55 ]), column(Bind. DB) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| description PFMBench evaluation of SaProt on BindingDB, scored with Spearman. Context-only references | pfmbench primary benchmark evidence Table 3, row(SaProt [ 55 ]), column(Bind. DB) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: benchmark pfmbench-task-binding-db Context-only references | pfmbench primary benchmark evidence Table 3, row(SaProt [ 55 ]), column(Bind. DB) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: dataset pfmbench-dataset-bindingdb Context-only references | pfmbench primary benchmark evidence Table 3, row(SaProt [ 55 ]), column(Bind. DB) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: model pfmbench-method-saprot Context-only references | pfmbench primary benchmark evidence Table 3, row(SaProt [ 55 ]), column(Bind. DB) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| name SaProt on PFMBench BINDING-DB: BindingDB Context-only references | pfmbench primary benchmark evidence Table 3, row(SaProt [ 55 ]), column(Bind. DB) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
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Release 2026-09-29-06401fd5b220 · Record review: source checked
Stable ID: pfmbench-evaluation-saprot-binding-db