PFMBench evaluation of PGLM on ProteinGym zero-shot variant effect prediction, scored with Spearman.
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Release 2026-09-29-06401fd5b220 · Evidence verified: Not verified
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1 evaluation · 1 result. Different protocols are not a single leaderboard.
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: PGLM | Task: PFMBench PROTEINGYM-ZS: ProteinGym zero-shot variant effect prediction Dataset subset: ProteinGym (PFMBench split) | 0.398 spearman correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourcePGLM on PFMBench PROTEINGYM-ZS: ProteinGym zero-shot variant effect prediction Scored zero-shot, with no fine-tuning, as reported in PFMBench Table 4. Aggregation: Not reported pfmbench primary benchmark evidence · Table 4, row(PGLM [ 5 ]), column(ProteinGym) |
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Scored zero-shot, with no fine-tuning, as reported in PFMBench Table 4.
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10 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.comparison.metric_implementation Spearman Context-only references | pfmbench primary benchmark evidence Table 4, row(PGLM [ 5 ]), column(ProteinGym) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.protocol_id pfmbench-task-proteingym-zs Context-only references | pfmbench primary benchmark evidence Table 4, row(PGLM [ 5 ]), column(ProteinGym) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.origin author_reported Context-only references | pfmbench primary benchmark evidence Table 4, row(PGLM [ 5 ]), column(ProteinGym) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.protocol Scored zero-shot, with no fine-tuning, as reported in PFMBench Table 4. Context-only references | pfmbench primary benchmark evidence Table 4, row(PGLM [ 5 ]), column(ProteinGym) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_locator Table 4, row(PGLM [ 5 ]), column(ProteinGym) Context-only references | pfmbench primary benchmark evidence Table 4, row(PGLM [ 5 ]), column(ProteinGym) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| description PFMBench evaluation of PGLM on ProteinGym zero-shot variant effect prediction, scored with Spearman. Context-only references | pfmbench primary benchmark evidence Table 4, row(PGLM [ 5 ]), column(ProteinGym) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: benchmark pfmbench-task-proteingym-zs Context-only references | pfmbench primary benchmark evidence Table 4, row(PGLM [ 5 ]), column(ProteinGym) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: dataset pfmbench-dataset-proteingym Context-only references | pfmbench primary benchmark evidence Table 4, row(PGLM [ 5 ]), column(ProteinGym) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: model pfmbench-method-pglm Context-only references | pfmbench primary benchmark evidence Table 4, row(PGLM [ 5 ]), column(ProteinGym) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| name PGLM on PFMBench PROTEINGYM-ZS: ProteinGym zero-shot variant effect prediction Context-only references | pfmbench primary benchmark evidence Table 4, row(PGLM [ 5 ]), column(ProteinGym) Version: 2506.14796v1 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
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Release 2026-09-29-06401fd5b220 · Record review: source checked
Stable ID: pfmbench-evaluation-pglm-proteingym-zs