mRNABench evaluation of DNABERT2 on Paired mean ribosome load and half life, scored with R.
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1 evaluation · 1 result. Different protocols are not a single leaderboard.
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: DNABERT2 | Task: mRNABench MRL-HL-PAIR: Paired mean ribosome load and half life Dataset subset: mRNABench MRL-HL-Pair (mRNABench split) | 0.53 pearson_r correlation · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceDNABERT2 on mRNABench MRL-HL-PAIR: Paired mean ribosome load and half life A linear probe over frozen embeddings, scored as the mean over ten random seeds. Aggregation: Not reported mRNABench: A curated benchmark for mature mRNA property and function prediction · Table 2, row(DNABERT2), column(MRL-HL-Pair) |
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A linear probe over frozen embeddings, scored as the mean over ten random seeds.
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12 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.comparison.metric_implementation R Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(DNABERT2), column(MRL-HL-Pair) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.protocol_id mrnabench-task-mrl-hl-pair Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(DNABERT2), column(MRL-HL-Pair) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.evidence_experiment_set_id mrnabench-2025-linear-probing-default-splits Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(DNABERT2), column(MRL-HL-Pair) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.evidence_overlap Tables 5/6 provide variant-level details of the same probing experiment set summarized by Table 2. These tables are not independent repetitions; no exact selected variant is inferred. Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(DNABERT2), column(MRL-HL-Pair) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.origin author_reported Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(DNABERT2), column(MRL-HL-Pair) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.protocol A linear probe over frozen embeddings, scored as the mean over ten random seeds. Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(DNABERT2), column(MRL-HL-Pair) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_locator Table 2, row(DNABERT2), column(MRL-HL-Pair) Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(DNABERT2), column(MRL-HL-Pair) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| description mRNABench evaluation of DNABERT2 on Paired mean ribosome load and half life, scored with R. Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(DNABERT2), column(MRL-HL-Pair) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: benchmark mrnabench-task-mrl-hl-pair Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(DNABERT2), column(MRL-HL-Pair) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: dataset mrnabench-dataset-mrnabench-mrl-hl-pair Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(DNABERT2), column(MRL-HL-Pair) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
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Release 2026-09-29-06401fd5b220 · Record review: source checked
Stable ID: mrnabench-evaluation-dnabert2-mrl-hl-pair