Published comparison transcribed from the pinned source; not reproduced.
1 evaluation · 3 results. Different protocols are not a single leaderboard.
Protocol: DNALONGBENCH Regulatory sequence activity prediction (Table 5) · Dataset: DNALONGBENCH Regulatory sequence activity prediction test set
Sorted by Pearson (average over RSAP conditions as printed) (higher is better). The best value in each column is highlighted. Decimals are rounded for display; each value links to the printed value and its source.
| Tested configuration | Pearson (average over RSAP conditions as printed) | Pearson (Human) | Pearson (Mouse) |
|---|---|---|---|
| Caduceus-PS (DNALONGBENCH)Evaluation | 0.344 | 0.301 | 0.387 |
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: Caduceus-PS (DNALONGBENCH) | Protocol: DNALONGBENCH Regulatory sequence activity prediction (Table 5) Dataset: DNALONGBENCH Regulatory sequence activity prediction test set | 0.344 Pearson (average over RSAP conditions as printed) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceCaduceus-PS on DNALONGBENCH RSAP lit-genomics-20261011-dnalongbench-protocol-rsap Aggregation: Not reported DNALONGBENCH: a benchmark suite for long-range DNA prediction tasks · Table 5, row 'Caduceus-PS', column 'Avg' |
| Configuration: Caduceus-PS (DNALONGBENCH) | Protocol: DNALONGBENCH Regulatory sequence activity prediction (Table 5) Dataset: DNALONGBENCH Regulatory sequence activity prediction test set | 0.301 Pearson (Human) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceCaduceus-PS on DNALONGBENCH RSAP lit-genomics-20261011-dnalongbench-protocol-rsap Aggregation: Not reported DNALONGBENCH: a benchmark suite for long-range DNA prediction tasks · Table 5, row 'Caduceus-PS', column 'Human' |
| Configuration: Caduceus-PS (DNALONGBENCH) | Protocol: DNALONGBENCH Regulatory sequence activity prediction (Table 5) Dataset: DNALONGBENCH Regulatory sequence activity prediction test set | 0.387 Pearson (Mouse) unitless · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceCaduceus-PS on DNALONGBENCH RSAP lit-genomics-20261011-dnalongbench-protocol-rsap Aggregation: Not reported DNALONGBENCH: a benchmark suite for long-range DNA prediction tasks · Table 5, row 'Caduceus-PS', column 'Mouse' |
Source checking is not independent reproduction. Release 2026-10-23-5347695500ed.
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Release 2026-10-23-5347695500ed · Evidence verified: Not verified
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DNALONGBENCH Regulatory sequence activity prediction (Table 5)
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18 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Comparison: adaptation Fine-tuned Context-only references | DNALONGBENCH: a benchmark suite for long-range DNA prediction tasks Table 5 row 'Caduceus-PS' Version: Nature Communications 16, published 2025-11-18; PMC12627797 full-text XML | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: aggregation Not reported Context-only references | DNALONGBENCH: a benchmark suite for long-range DNA prediction tasks Table 5 row 'Caduceus-PS' Version: Nature Communications 16, published 2025-11-18; PMC12627797 full-text XML | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: budget Not reported Context-only references | DNALONGBENCH: a benchmark suite for long-range DNA prediction tasks Table 5 row 'Caduceus-PS' Version: Nature Communications 16, published 2025-11-18; PMC12627797 full-text XML | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: dataset version Not reported Context-only references | DNALONGBENCH: a benchmark suite for long-range DNA prediction tasks Table 5 row 'Caduceus-PS' Version: Nature Communications 16, published 2025-11-18; PMC12627797 full-text XML | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: inputs DNA sequence Context-only references | DNALONGBENCH: a benchmark suite for long-range DNA prediction tasks Table 5 row 'Caduceus-PS' Version: Nature Communications 16, published 2025-11-18; PMC12627797 full-text XML | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: metric implementation Not reported Context-only references | DNALONGBENCH: a benchmark suite for long-range DNA prediction tasks Table 5 row 'Caduceus-PS' Version: Nature Communications 16, published 2025-11-18; PMC12627797 full-text XML | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: population Not reported Context-only references | DNALONGBENCH: a benchmark suite for long-range DNA prediction tasks Table 5 row 'Caduceus-PS' Version: Nature Communications 16, published 2025-11-18; PMC12627797 full-text XML | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: protocol id lit-genomics-20261011-dnalongbench-protocol-rsap Context-only references | DNALONGBENCH: a benchmark suite for long-range DNA prediction tasks Table 5 row 'Caduceus-PS' Version: Nature Communications 16, published 2025-11-18; PMC12627797 full-text XML | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: split Held-out test set Context-only references | DNALONGBENCH: a benchmark suite for long-range DNA prediction tasks Table 5 row 'Caduceus-PS' Version: Nature Communications 16, published 2025-11-18; PMC12627797 full-text XML | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Origin independent_paper Context-only references | DNALONGBENCH: a benchmark suite for long-range DNA prediction tasks Table 5 row 'Caduceus-PS' Version: Nature Communications 16, published 2025-11-18; PMC12627797 full-text XML | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Release 2026-10-23-5347695500ed · Record review: source checked
Stable ID: lit-genomics-20261011-dnalongbench-eval-caduceus-ps-rsap