GUE evaluation of DNABERT-2 on Transcription factor prediction (human), dataset 4, scored with MCC.
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1 evaluation · 1 result. Different protocols are not a single leaderboard.
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: DNABERT-2 | Task: GUE TRANSCRIPTION-FACTOR-PREDICTION-HUMAN-4: Transcription factor prediction (human), dataset 4 Dataset subset: GUE Transcription factor prediction (human), 4 (GUE split) | 77.4% mcc percent · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · Source checkedMethods, coverage and sourceFine-tuned on the GUE training split, scored on its test split. Split sizes are in Table 12. Aggregation: Not reported DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genomes · Table 6, row(DNABERT-2), column(Transcription factor prediction (human) 4) |
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Fine-tuned on the GUE training split, scored on its test split. Split sizes are in Table 12.
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10 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.comparison.metric_implementation MCC Context-only references | DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genomes Table 6, row(DNABERT-2), column(Transcription factor prediction (human) 4) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.protocol_id gue-task-transcription-factor-prediction-human-4 Context-only references | DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genomes Table 6, row(DNABERT-2), column(Transcription factor prediction (human) 4) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.origin author_reported Context-only references | DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genomes Table 6, row(DNABERT-2), column(Transcription factor prediction (human) 4) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.protocol Fine-tuned on the GUE training split, scored on its test split. Split sizes are in Table 12. Context-only references | DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genomes Table 6, row(DNABERT-2), column(Transcription factor prediction (human) 4) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_locator Table 6, row(DNABERT-2), column(Transcription factor prediction (human) 4) Context-only references | DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genomes Table 6, row(DNABERT-2), column(Transcription factor prediction (human) 4) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| description GUE evaluation of DNABERT-2 on Transcription factor prediction (human), dataset 4, scored with MCC. Context-only references | DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genomes Table 6, row(DNABERT-2), column(Transcription factor prediction (human) 4) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: benchmark gue-task-transcription-factor-prediction-human-4 Context-only references | DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genomes Table 6, row(DNABERT-2), column(Transcription factor prediction (human) 4) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: dataset gue-dataset-gue-transcription-factor-prediction-human-4 Context-only references | DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genomes Table 6, row(DNABERT-2), column(Transcription factor prediction (human) 4) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: model gue-method-dnabert-2 Context-only references | DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genomes Table 6, row(DNABERT-2), column(Transcription factor prediction (human) 4) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| name DNABERT-2 on GUE TRANSCRIPTION-FACTOR-PREDICTION-HUMAN-4: Transcription factor prediction (human), dataset 4 Context-only references | DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genomes Table 6, row(DNABERT-2), column(Transcription factor prediction (human) 4) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
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Release 2026-09-29-06401fd5b220 · Record review: source checked
Stable ID: gue-evaluation-dnabert-2-transcription-factor-prediction-human-4