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1 evaluation · 1 result. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: NTv1 (Multispecies 2.5B), frozen embeddings, max, special tokens excluded pooling, 1-NN (Bůžková et al. 2026) | Protocol: RVDB 33-class viral classification by nearest-neighbour retrieval over frozen embeddings (Bůžková et al. 2026 Table 3) Dataset: RVDB C-RVDB v31.0 primary dataset, 33 refined classes | 0.903 Accuracy (33-class RVDB dataset, 1-NN over frozen embeddings) fraction · higher Uncertainty: Not reported by the source Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceNTv1 (Multispecies 2.5B), max, special tokens excluded pooling, on the RVDB 33-class dataset gfm2-20261011-buzkova2026-protocol-acc-33 Aggregation: Not reported Analyzing Genomic Foundation Models for Viral Sequence Identification · Table 3, column 'NTv1', row 'Max, special tokens excluded' |
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19 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Comparison: adaptation None: frozen weights, max, special tokens excluded pooling, 1-NN over the indexed training embeddings Context-only references | Analyzing Genomic Foundation Models for Viral Sequence Identification Table 3, column 'NTv1', row 'Max, special tokens excluded' Version: bioRxiv v1, posted 2026-09-28 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: aggregation Pooled over test sequences Context-only references | Analyzing Genomic Foundation Models for Viral Sequence Identification Table 3, column 'NTv1', row 'Max, special tokens excluded' Version: bioRxiv v1, posted 2026-09-28 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: budget Not reported Context-only references | Analyzing Genomic Foundation Models for Viral Sequence Identification Table 3, column 'NTv1', row 'Max, special tokens excluded' Version: bioRxiv v1, posted 2026-09-28 | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: dataset version C-RVDB v31.0 primary dataset, 33 refined classes Context-only references | Analyzing Genomic Foundation Models for Viral Sequence Identification Table 3, column 'NTv1', row 'Max, special tokens excluded' Version: bioRxiv v1, posted 2026-09-28 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: inputs Nucleotide sequence up to 2,046 bp Context-only references | Analyzing Genomic Foundation Models for Viral Sequence Identification Table 3, column 'NTv1', row 'Max, special tokens excluded' Version: bioRxiv v1, posted 2026-09-28 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: metric implementation Accuracy over test sequences Context-only references | Analyzing Genomic Foundation Models for Viral Sequence Identification Table 3, column 'NTv1', row 'Max, special tokens excluded' Version: bioRxiv v1, posted 2026-09-28 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: population 4,950 test sequences Context-only references | Analyzing Genomic Foundation Models for Viral Sequence Identification Table 3, column 'NTv1', row 'Max, special tokens excluded' Version: bioRxiv v1, posted 2026-09-28 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: protocol id gfm2-20261011-buzkova2026-protocol-acc-33 Context-only references | Analyzing Genomic Foundation Models for Viral Sequence Identification Table 3, column 'NTv1', row 'Max, special tokens excluded' Version: bioRxiv v1, posted 2026-09-28 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Comparison: split 350 indexed and 150 queried sequences per class Context-only references | Analyzing Genomic Foundation Models for Viral Sequence Identification Table 3, column 'NTv1', row 'Max, special tokens excluded' Version: bioRxiv v1, posted 2026-09-28 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Limitations1 values
| Analyzing Genomic Foundation Models for Viral Sequence Identification Table 3, column 'NTv1', row 'Max, special tokens excluded' Version: bioRxiv v1, posted 2026-09-28 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Release 2026-11-02-a7f03c9e55a5 · Record review: source checked
Stable ID: gfm2-20261011-buzkova2026-eval-t3-ntv1-max-excl