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10 evaluations · 20 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: Alchemy_RNA (RhoFold) | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 2.87 Å rmsd angstrom · lower Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourceAlchemy_RNA (RhoFold) on RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Retrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!E7; method fig2hi!A7; target fig2hi!E1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: Alchemy_RNA (RhoFold) | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-sum_z_gdt_ts_tm_score: R1117: Sum of Z-scores for GDT-TS and TM-score Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 2.77 sum_z_gdt_ts_tm_score dimensionless · higher Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourceRetrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!K7; method fig2hi!A7; target fig2hi!K1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: Alchemy_RNA2 | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 2.27 Å rmsd angstrom · lower Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourceAlchemy_RNA2 on RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Retrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!E9; method fig2hi!A9; target fig2hi!E1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: Alchemy_RNA2 | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-sum_z_gdt_ts_tm_score: R1117: Sum of Z-scores for GDT-TS and TM-score Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 3.91 sum_z_gdt_ts_tm_score dimensionless · higher Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourceRetrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!K9; method fig2hi!A9; target fig2hi!K1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: AlphaFold3 | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 2.61 Å rmsd angstrom · lower Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Independent external evaluation · Source checkedMethods, coverage and sourceAlphaFold3 on RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Retrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!E10; method fig2hi!A10; target fig2hi!E1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: AlphaFold3 | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-sum_z_gdt_ts_tm_score: R1117: Sum of Z-scores for GDT-TS and TM-score Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 1.97 sum_z_gdt_ts_tm_score dimensionless · higher Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Independent external evaluation · Source checkedMethods, coverage and sourceRetrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!K10; method fig2hi!A10; target fig2hi!K1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: Baker (RoseTTAFoldNA) | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 3.73 Å rmsd angstrom · lower Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourceBaker (RoseTTAFoldNA) on RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Retrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!E2; method fig2hi!A2; target fig2hi!E1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: Baker (RoseTTAFoldNA) | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-sum_z_gdt_ts_tm_score: R1117: Sum of Z-scores for GDT-TS and TM-score Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 0.12 sum_z_gdt_ts_tm_score dimensionless · higher Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourceRetrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!K2; method fig2hi!A2; target fig2hi!K1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: Chen | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 2.01 Å rmsd angstrom · lower Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourceChen on RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Retrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!E8; method fig2hi!A8; target fig2hi!E1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: Chen | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-sum_z_gdt_ts_tm_score: R1117: Sum of Z-scores for GDT-TS and TM-score Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 3.98 sum_z_gdt_ts_tm_score dimensionless · higher Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourceRetrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!K8; method fig2hi!A8; target fig2hi!K1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: DF_RNA (DeepFoldRNA) | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 3.4 Å rmsd angstrom · lower Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourceDF_RNA (DeepFoldRNA) on RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Retrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!E3; method fig2hi!A3; target fig2hi!E1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: DF_RNA (DeepFoldRNA) | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-sum_z_gdt_ts_tm_score: R1117: Sum of Z-scores for GDT-TS and TM-score Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 0.79 sum_z_gdt_ts_tm_score dimensionless · higher Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourceRetrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!K3; method fig2hi!A3; target fig2hi!K1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: rDP (DRfold) | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 2.67 Å rmsd angstrom · lower Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourcerDP (DRfold) on RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Retrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!E5; method fig2hi!A5; target fig2hi!E1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: rDP (DRfold) | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-sum_z_gdt_ts_tm_score: R1117: Sum of Z-scores for GDT-TS and TM-score Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 1.15 sum_z_gdt_ts_tm_score dimensionless · higher Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourceRetrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!K5; method fig2hi!A5; target fig2hi!K1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: RhoFold+ | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 2.87 Å rmsd angstrom · lower Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Author-reported evaluation · Source checkedMethods, coverage and sourceRhoFold+ on RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Retrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!E11; method fig2hi!A11; target fig2hi!E1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: RhoFold+ | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-sum_z_gdt_ts_tm_score: R1117: Sum of Z-scores for GDT-TS and TM-score Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 2.01 sum_z_gdt_ts_tm_score dimensionless · higher Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Author-reported evaluation · Source checkedMethods, coverage and sourceRetrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!K11; method fig2hi!A11; target fig2hi!K1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: UltraFold | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 4.03 Å rmsd angstrom · lower Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourceUltraFold on RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Retrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!E6; method fig2hi!A6; target fig2hi!E1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: UltraFold | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-sum_z_gdt_ts_tm_score: R1117: Sum of Z-scores for GDT-TS and TM-score Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 0.52 sum_z_gdt_ts_tm_score dimensionless · higher Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourceRetrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!K6; method fig2hi!A6; target fig2hi!K1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: Yang-best | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 2.7 Å rmsd angstrom · lower Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourceYang-best on RhoFold+ 2024 CASP15 natural RNA comparison R1117-rmsd: R1117: RMSD Retrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!E4; method fig2hi!A4; target fig2hi!E1; Fig. 2h caption; XML Par13–15 and Par51 |
| Configuration: Yang-best | Protocol: RhoFold+ 2024 CASP15 natural RNA comparison R1117-sum_z_gdt_ts_tm_score: R1117: Sum of Z-scores for GDT-TS and TM-score Dataset subset: CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) | 1.54 sum_z_gdt_ts_tm_score dimensionless · higher Uncertainty: Not reported Coverage: unit: CASP15 natural RNA target; scored: 1; eligible: 1; note: Per-cell target count; source retains up to five candidate structures, not five independent evaluation targets. | Result quoted from another source · Source checkedMethods, coverage and sourceRetrospective evaluation of six CASP15 natural single-chain RNA targets; each task retains one named target. Artificially designed targets and RNA-protein complexes excluded. RNA sequence inputs without ions or other molecules. Paper Par13 selects the highest-performing of five candidates; Par51 describes five sampled-MSA runs for RhoFold+, one AlphaFold3 server run yielding five models, and five CASP15 models for the other methods. Figure 2h reports RMSD and sum of Z-scores for GDT-TS and TM-score. Metric-specific winning candidate identity, exact scoring-tool revision and RMSD atom selection remain unextracted. No target pooling or score recomputation. Aggregation: Source-reported selected candidate for one target; no cross-target aggregation. RhoFold+ Nature Methods 2024: Source Data Figure 2h · fig2hi!K4; method fig2hi!A4; target fig2hi!K1; Fig. 2h caption; XML Par13–15 and Par51 |
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Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
2 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| description Dataset subset reported in RhoFold+ Nature Methods 2024: Source Data Figure 2h. Exact split manifest remains unextracted; source-table identity is retained. Context-only references | RhoFold+ Nature Methods 2024: Source Data Figure 2h No field-specific location recorded Version: Publisher Source Data Fig. 2, DOI 10.1038/s41592-024-02487-0; retrieved 2026-09-23 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| name CASP15 natural RNA target R1117 (RhoFold+ 2024 CASP15 natural RNA comparison split) Context-only references | RhoFold+ Nature Methods 2024: Source Data Figure 2h No field-specific location recorded Version: Publisher Source Data Fig. 2, DOI 10.1038/s41592-024-02487-0; retrieved 2026-09-23 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
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Release 2026-09-29-06401fd5b220 · Record review: source checked
Stable ID: rhofold-2024-casp15-natural-dataset-casp15-natural-rna-target-r1117