Dataset subset

MFASS v2 test: matched canonical annotation coverage

8,297 of 8,324 held-out variants scored in every configuration (314 positives, 460 exon groups). The same 27 rows are excluded: 23 assembly-orientation mismatches and four outside the selected canonical transcript spans. Missing scores are not zero or negative predictions.

Evaluation results

4 evaluations · 16 results. Different protocols are not a single leaderboard.

Filter evaluations

Tested model or methodProtocolDatasetEvaluation setupMetricEvidence origin

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configuration	Protocol and dataset	Finding	Evidence and details
Configuration: Pangolin 1.0.2 + per-gene masking patch · mask False (P0)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.876 AUROC unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source Pangolin 1.0.2 + per-gene masking patch · mask False (P0) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.P0.metrics.auroc
Configuration: Pangolin 1.0.2 + per-gene masking patch · mask False (P0)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.389 Average precision unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source Pangolin 1.0.2 + per-gene masking patch · mask False (P0) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.P0.metrics.average_precision_sklearn
Configuration: Pangolin 1.0.2 + per-gene masking patch · mask False (P0)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.65 Precision at 100 unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source Pangolin 1.0.2 + per-gene masking patch · mask False (P0) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.P0.metrics.precision_at_capacity
Configuration: Pangolin 1.0.2 + per-gene masking patch · mask False (P0)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.207 Recall at 100 unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source Pangolin 1.0.2 + per-gene masking patch · mask False (P0) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.P0.metrics.recall_at_capacity
Configuration: Pangolin 1.0.2 + per-gene masking patch · mask True (P1)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.873 AUROC unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source Pangolin 1.0.2 + per-gene masking patch · mask True (P1) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.P1.metrics.auroc
Configuration: Pangolin 1.0.2 + per-gene masking patch · mask True (P1)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.411 Average precision unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source Pangolin 1.0.2 + per-gene masking patch · mask True (P1) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.P1.metrics.average_precision_sklearn
Configuration: Pangolin 1.0.2 + per-gene masking patch · mask True (P1)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.66 Precision at 100 unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source Pangolin 1.0.2 + per-gene masking patch · mask True (P1) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.P1.metrics.precision_at_capacity
Configuration: Pangolin 1.0.2 + per-gene masking patch · mask True (P1)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.21 Recall at 100 unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source Pangolin 1.0.2 + per-gene masking patch · mask True (P1) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.P1.metrics.recall_at_capacity
Configuration: SpliceAI 1.3.1 · mask 0 (S0)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.804 AUROC unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source SpliceAI 1.3.1 · mask 0 (S0) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.S0.metrics.auroc
Configuration: SpliceAI 1.3.1 · mask 0 (S0)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.295 Average precision unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source SpliceAI 1.3.1 · mask 0 (S0) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.S0.metrics.average_precision_sklearn
Configuration: SpliceAI 1.3.1 · mask 0 (S0)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.63 Precision at 100 unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source SpliceAI 1.3.1 · mask 0 (S0) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.S0.metrics.precision_at_capacity
Configuration: SpliceAI 1.3.1 · mask 0 (S0)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.201 Recall at 100 unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source SpliceAI 1.3.1 · mask 0 (S0) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.S0.metrics.recall_at_capacity
Configuration: SpliceAI 1.3.1 · mask 1 (S1)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.815 AUROC unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source SpliceAI 1.3.1 · mask 1 (S1) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.S1.metrics.auroc
Configuration: SpliceAI 1.3.1 · mask 1 (S1)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.313 Average precision unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source SpliceAI 1.3.1 · mask 1 (S1) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.S1.metrics.average_precision_sklearn
Configuration: SpliceAI 1.3.1 · mask 1 (S1)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.65 Precision at 100 unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source SpliceAI 1.3.1 · mask 1 (S1) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.S1.metrics.precision_at_capacity
Configuration: SpliceAI 1.3.1 · mask 1 (S1)	Protocol: MFASS: matched GENCODE 44 canonical annotation Dataset subset: MFASS v2 test: matched canonical annotation coverage	0.207 Recall at 100 unitless · higher Uncertainty: Not reported by the source: Point estimate; paired contrast intervals are reported separately in the source and must not be used as intervals for this individual condition. Coverage: 8297/8324 scored	Rewire evaluation · Source checked Methods, coverage and source SpliceAI 1.3.1 · mask 1 (S1) on MFASS matched annotation MFASS matched GENCODE 44 canonical annotation Aggregation: Not reported MFASS matched canonical annotation v1: report.json; MFASS matched canonical annotation v1: manifest-v1.json; MFASS matched canonical annotation v1: verification.json; MFASS matched canonical annotation v1: provenance.json; MFASS matched canonical annotation v1: exclusion-verification.json · report.json: conditions.S1.metrics.recall_at_capacity

Source checking is not independent reproduction. Release 2026-11-02-a7f03c9e55a5.

Research readiness

0 of 4 readiness checks met. These checks assess whether the evidence supports a reproducible investigation; a source-checked score alone does not meet them.

Readiness checks, gaps and artifacts

Release 2026-11-02-a7f03c9e55a5 · Evidence verified: Not verified

Evidence incomplete

Replay metrics

Exact outcomes, predictions, identifiers and evaluator are connected.

Missing or unresolved evidence

No verified artifact manifest is linked to this exact record.
File checksums match the recorded files: not yet verified
Predictions are matched to the right samples: not yet verified
Score meaning and direction are confirmed: not yet verified
Metrics are recomputed from the saved predictions: not yet verified

Verified: Not verified

Evidence incomplete

Investigate discrepancies

Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.

Missing or unresolved evidence

No verified artifact manifest is linked to this exact record.
File checksums match the recorded files: not yet verified
Predictions are matched to the right samples: not yet verified
Score meaning and direction are confirmed: not yet verified
Metrics are recomputed from the saved predictions: not yet verified
Sample annotations are recorded: not yet verified
Dependence between samples is assessed: not yet verified

Verified: Not verified

Evidence incomplete

Run locally

A pinned recipe describes the inputs, environment and resource requirements.

Missing or unresolved evidence

No verified artifact manifest is linked to this exact record.
File checksums match the recorded files: not yet verified
Predictions are matched to the right samples: not yet verified
Score meaning and direction are confirmed: not yet verified
A pinned run recipe exists: not yet verified
Compute requirements are estimated: not yet verified

Verified: Not verified

Evidence incomplete

Validate independently

Separate data and exposure records support an independent test.

Missing or unresolved evidence

No verified artifact manifest is linked to this exact record.
File checksums match the recorded files: not yet verified
Predictions are matched to the right samples: not yet verified
Score meaning and direction are confirmed: not yet verified
Independent validation data exist: not yet verified
Overlap with training data is checked: not yet verified

Verified: Not verified

Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.

Artifacts and reproduction

No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.

Subset and evaluation context

This record describes a particular subset or cohort used in an evaluation. Its results do not describe the full dataset.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

70 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statement	Original source and location	Review and provenance
Exclusion counts: assembly orientation 23 Context-only references	MFASS matched canonical annotation v1: exclusion-verification.json Original source ↗ report.json: coverage and contrasts; computational exclusion verification Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 4be7a98e2553fa2378c29625b13eb3e8ac2e58fb Retrieved: 2026-09-25T11:24:56Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.exclusion_counts.assembly_orientation` Source artifact SHA-256: `5d2099db4cf6f01432fd88c7db949da89ab9917940705fd0eaa1fb7c9354d46a` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Exclusion counts: assembly orientation 23 Context-only references	MFASS matched canonical annotation v1: manifest-v1.json Original source ↗ report.json: coverage and contrasts; computational exclusion verification Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 093fd1ae198c80ce34408d84d6543bca4fc538f2 Retrieved: 2026-09-25T11:24:56Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.exclusion_counts.assembly_orientation` Source artifact SHA-256: `3fce70dd0bd96cb92d9d0e41287f31e62ddc4ecb8d188615093a873e952433e8` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Exclusion counts: assembly orientation 23 Context-only references	MFASS matched canonical annotation v1: provenance.json Original source ↗ report.json: coverage and contrasts; computational exclusion verification Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 093fd1ae198c80ce34408d84d6543bca4fc538f2 Retrieved: 2026-09-25T11:24:56Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.exclusion_counts.assembly_orientation` Source artifact SHA-256: `6304e9625e793f24cccdc2669d092e6cdcc7a508a7f789967e726816fffde062` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Exclusion counts: assembly orientation 23 Context-only references	MFASS matched canonical annotation v1: report.json Original source ↗ report.json: coverage and contrasts; computational exclusion verification Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 093fd1ae198c80ce34408d84d6543bca4fc538f2 Retrieved: 2026-09-25T11:24:56Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.exclusion_counts.assembly_orientation` Source artifact SHA-256: `259eb542313914b9114c21b62891f022c0ec0d9e3337196b8d7b2c6d5ae54ef3` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Exclusion counts: assembly orientation 23 Context-only references	MFASS matched canonical annotation v1: verification.json Original source ↗ report.json: coverage and contrasts; computational exclusion verification Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 093fd1ae198c80ce34408d84d6543bca4fc538f2 Retrieved: 2026-09-25T11:24:56Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.exclusion_counts.assembly_orientation` Source artifact SHA-256: `13356c3f1bd7055b11cc0ab1b2b86a7ee586c51d0c984fad6e39ce8948d662fa` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Exclusion counts: canonical transcript span 4 Context-only references	MFASS matched canonical annotation v1: exclusion-verification.json Original source ↗ report.json: coverage and contrasts; computational exclusion verification Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 4be7a98e2553fa2378c29625b13eb3e8ac2e58fb Retrieved: 2026-09-25T11:24:56Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.exclusion_counts.canonical_transcript_span` Source artifact SHA-256: `5d2099db4cf6f01432fd88c7db949da89ab9917940705fd0eaa1fb7c9354d46a` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Exclusion counts: canonical transcript span 4 Context-only references	MFASS matched canonical annotation v1: manifest-v1.json Original source ↗ report.json: coverage and contrasts; computational exclusion verification Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 093fd1ae198c80ce34408d84d6543bca4fc538f2 Retrieved: 2026-09-25T11:24:56Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.exclusion_counts.canonical_transcript_span` Source artifact SHA-256: `3fce70dd0bd96cb92d9d0e41287f31e62ddc4ecb8d188615093a873e952433e8` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Exclusion counts: canonical transcript span 4 Context-only references	MFASS matched canonical annotation v1: provenance.json Original source ↗ report.json: coverage and contrasts; computational exclusion verification Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 093fd1ae198c80ce34408d84d6543bca4fc538f2 Retrieved: 2026-09-25T11:24:56Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.exclusion_counts.canonical_transcript_span` Source artifact SHA-256: `6304e9625e793f24cccdc2669d092e6cdcc7a508a7f789967e726816fffde062` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Exclusion counts: canonical transcript span 4 Context-only references	MFASS matched canonical annotation v1: report.json Original source ↗ report.json: coverage and contrasts; computational exclusion verification Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 093fd1ae198c80ce34408d84d6543bca4fc538f2 Retrieved: 2026-09-25T11:24:56Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.exclusion_counts.canonical_transcript_span` Source artifact SHA-256: `259eb542313914b9114c21b62891f022c0ec0d9e3337196b8d7b2c6d5ae54ef3` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Exclusion counts: canonical transcript span 4 Context-only references	MFASS matched canonical annotation v1: verification.json Original source ↗ report.json: coverage and contrasts; computational exclusion verification Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 093fd1ae198c80ce34408d84d6543bca4fc538f2 Retrieved: 2026-09-25T11:24:56Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.exclusion_counts.canonical_transcript_span` Source artifact SHA-256: `13356c3f1bd7055b11cc0ab1b2b86a7ee586c51d0c984fad6e39ce8948d662fa` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact

How to read the evidence

Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

5 source records and release history

MFASS matched canonical annotation v1: report.json · Original source · 093fd1ae198c80ce34408d84d6543bca4fc538f2
MFASS matched canonical annotation v1: manifest-v1.json · Original source · 093fd1ae198c80ce34408d84d6543bca4fc538f2
MFASS matched canonical annotation v1: verification.json · Original source · 093fd1ae198c80ce34408d84d6543bca4fc538f2
MFASS matched canonical annotation v1: provenance.json · Original source · 093fd1ae198c80ce34408d84d6543bca4fc538f2
MFASS matched canonical annotation v1: exclusion-verification.json · Original source · 4be7a98e2553fa2378c29625b13eb3e8ac2e58fb

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Technical metadata and extraction receipts

Stable ID: rewire-mfass-matched-v1-dataset

areas: dna-genomes
version: split-v2-matched-annotation-v1
test count: 8324
scored count: 8297
missing count: 27
positive count: 314
independent groups: 460
scored ids sha256: 89b5568e2d819b892ba5e6db680d85e41224d6a69fec4b09a85c5075cade39d8
exclusion counts: assembly orientation: 23; canonical transcript span: 4
exclusion issue url: https://github.com/KosuriLab/MFASS/issues/1
source locator: report.json: coverage and contrasts; computational exclusion verification
limitations: 8,297 of 8,324 held-out variants scored in every configuration (314 positives, 460 exon groups). The same 27 rows are excluded: 23 assembly-orientation mismatches and four outside the selected canonical transcript spans. Missing scores are not zero or negative predictions.; Exploratory comparison: prior results were known. Paired contrast intervals are unadjusted and do not establish a universal model ranking.; Pangolin uses the recorded per-gene masking patch; these are exact configurations, not unqualified upstream model scores.; Precision at 100 is sensitive to tied-score ordering, especially P1. Numerical source checking is automated, not human review or independent reproduction.; Assembly-orientation issue reported at https://github.com/KosuriLab/MFASS/issues/1. Original v1 outputs remain unchanged; corrections require a new version.

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