5 evaluations · 5 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: DNABERT-2 (Human 5mC classification) | Protocol: Feng Human 5mC sequence classification Dataset: Human 5mC | 0.685 AUROC (task: human 5mc) unitless · higher Uncertainty: Not reported by the source: Table 3 prints point AUCs only. Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceDNABERT-2 Human 5mC evaluation Table 3, frozen embeddings + task-specific random forest classifier Aggregation: Not reported Benchmarking DNA foundation models for genomic and genetic tasks · Table 3, row 'Human 5mC', column 'DNABERT-2'. |
| Configuration: GROVER (Human 5mC classification) | Protocol: Feng Human 5mC sequence classification Dataset: Human 5mC | 0.744 AUROC (task: human 5mc) unitless · higher Uncertainty: Not reported by the source: Table 3 prints point AUCs only. Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceTable 3, frozen embeddings + task-specific random forest classifier Aggregation: Not reported Benchmarking DNA foundation models for genomic and genetic tasks · Table 3, row 'Human 5mC', column 'GROVER'. Printed in bold (table footnote: 'Bolded: higher than at least two other AUCs, p < 0.01.'). |
| Configuration: HyenaDNA (Human 5mC classification) | Protocol: Feng Human 5mC sequence classification Dataset: Human 5mC | 0.684 AUROC (task: human 5mc) unitless · higher Uncertainty: Not reported by the source: Table 3 prints point AUCs only. Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceTable 3, frozen embeddings + task-specific random forest classifier Aggregation: Not reported Benchmarking DNA foundation models for genomic and genetic tasks · Table 3, row 'Human 5mC', column 'HyenaDNA'. |
| Configuration: Caduceus-Ph | Task: Human 5mC detection Dataset: Human 5mC | 0.783 AUROC unitless · unknown Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceCaduceus-Ph: Human 5mC detection Binary epigenetic-modification classification as reported in the paper. Aggregation: Not reported Benchmarking DNA foundation models for genomic and genetic tasks · Table 3, Human 5mC row, Caduceus-Ph column |
| Configuration: NT-v2 | Task: Human 5mC detection Dataset: Human 5mC | 0.738 AUROC unitless · unknown Uncertainty: Not yet extracted Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceBinary epigenetic-modification classification as reported in the paper. Aggregation: Not reported Benchmarking DNA foundation models for genomic and genetic tasks · Table 3, Human 5mC row, NT-v2 column |
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Release 2026-11-02-a7f03c9e55a5 · Evidence verified: Not verified
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2 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Description No value recorded Context-only references | Benchmarking DNA foundation models for genomic and genetic tasks No field-specific location recorded Version: PMC12663285.1 | missing or unspecified No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Name Human 5mC Context-only references | Benchmarking DNA foundation models for genomic and genetic tasks No field-specific location recorded Version: PMC12663285.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Release 2026-11-02-a7f03c9e55a5 · Record review: needs review
Stable ID: reported-dataset-463197d6a98b99